CX070097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_PLAFO (Tubulin gamma chain OS=Plasmodium falciparum (isolate NF54) GN=G-TUB PE=2 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 3.177e-85 Identity = 152/235 (64.68%), Postives = 198/235 (84.26%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 E+SDVVVQPYNS+LTLKRL L+ D VVV+DNT+LNRI VERL L NPTF QTN+++S VMSASTTTLRYPG MNND++ L++SLI P+CHFL+T YTP+T+++ + ++KTTVLDVM+RLL TKNIMVS+ R + YISILNII+GE DPTQVH+ LQRIR+RKLVNFI+W PASIQV L+++SP+V + H+V GLM+A+HTSI LF +C++Q+++L K++AFL+NY+ Sbjct: 178 ESSDVVVQPYNSILTLKRLILSTDSVVVIDNTSLNRIFVERLKLNNPTFQQTNTIISNVMSASTTTLRYPGSMNNDMISLISSLIINPKCHFLITSYTPITIDKHISNVQKTTVLDVMKRLLHTKNIMVSAPVR-----RGMYISILNIIRGETDPTQVHKGLQRIRDRKLVNFIKWNPASIQVTLAKQSPHVVSQHKVCGLMMANHTSISTLFERCVTQFDRLYKRRAFLENYK 407
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_NEUCR (Tubulin gamma chain OS=Neurospora crassa GN=tub-4 PE=2 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 7.077e-85 Identity = 161/234 (68.80%), Postives = 190/234 (81.20%), Query Frame = 3 Query: 153 DVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVER--QANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 DVVV PYNSLL ++RLT NAD VVVLDN AL+ IA +RLH+Q P+F QTN LVSTVMSASTTTLRYPGYM+NDLV +LASLIPTPRCHFLMT YTP T ++ QA +RKTTVLDVMRRLLQ KN MVS T ++ YISILN+IQG+VDPT VH+SL RIRER+L FI WGPASIQVAL+++SPYV AHRVSGLMLA+HTSI LF + + QY+ +RK+ AF++ Y+ Sbjct: 180 DVVVHPYNSLLAMRRLTQNADSVVVLDNGALSHIAADRLHVQEPSFQQTNQLVSTVMSASTTTLRYPGYMHNDLVSILASLIPTPRCHFLMTSYTPFTGDQVEQAKTVRKTTVLDVMRRLLQPKNRMVS----TVPGKKSCYISILNVIQGDVDPTDVHKSLLRIRERRLATFIPWGPASIQVALTKRSPYVTMAHRVSGLMLANHTSIATLFKRIVRQYDGMRKRNAFMEAYK 409
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_USTVI (Tubulin gamma chain OS=Ustilago violacea GN=TUB4 PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 2.059e-84 Identity = 159/237 (67.09%), Postives = 193/237 (81.43%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVER--QANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 ++ DVVVQPYNSLL++KRLT +AD V+VLDN AL++I +RLH+Q +FAQTN LVSTVMSAST TLRYPGYMNNDLVG++ASLIPTPRCHFL T YTP T ++ QA +RKTTVLDVMRRLLQ KN +VS T + A YISILNIIQGEVDPT VH+SL RIRER FI WGPASIQVAL+++SPYVQT H+VSGLMLA+HT+I +F + ++QY++LRK+ AF+ Y+ Sbjct: 176 DSGDVVVQPYNSLLSMKRLTNHADSVIVLDNAALSKICQDRLHVQVASFAQTNQLVSTVMSASTQTLRYPGYMNNDLVGMIASLIPTPRCHFLTTSYTPFTSDKIEQAKAVRKTTVLDVMRRLLQPKNRLVS--MPTTPSRHACYISILNIIQGEVDPTDVHKSLLRIRERNSATFIPWGPASIQVALTKQSPYVQTTHKVSGLMLANHTNIASIFKRTVAQYDQLRKRNAFMPQYQ 410
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_RETFI (Tubulin gamma chain OS=Reticulomyxa filosa PE=2 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 1.169e-79 Identity = 148/235 (62.98%), Postives = 190/235 (80.85%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 E S VVV PYNS+L LKRL LNAD VVV+DNT+L+RIA ERL L +F +TNS++STVM+ASTTTLRYPGYMNNDLVGL+ASL+PTPR HFLMT +TPL ++ I+KT+VLDVMRRLLQ KNIMVS + + Y+SIL+II+G+VDPT +H+SLQRIRE+K+VNFI WGPASIQVALS++SPY +RVSG M+A+H+++ +LF++ + Y+ LRK+ AFL+ Y+ Sbjct: 176 ERSSVVVHPYNSVLALKRLILNADAVVVIDNTSLHRIADERLQLDFASFKETNSIISTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRAHFLMTSFTPLVIKGAQRRIQKTSVLDVMRRLLQPKNIMVSCGTK-----KGVYVSILDIIRGDVDPTDIHKSLQRIREKKIVNFIPWGPASIQVALSKQSPYANVPYRVSGCMMANHSNLGNLFARIIRTYDILRKRNAFLNVYK 405
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_COCHE (Tubulin gamma chain (Fragment) OS=Cochliobolus heterostrophus GN=TUB4 PE=3 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.821e-48 Identity = 105/158 (66.46%), Postives = 123/158 (77.85%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYT--PLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDP 611 + D+VVQPYNSLL+++RLT NAD VVVLDN AL RIA +RLH+ P+F QTN LVSTVMSASTTTLRYP Y +NDLVG++ASLIPTPRCHFLMT YT VE QA +RKTTVLDVMRRLLQ KN MVS+ + ++ Y+SILNIIQ + P Sbjct: 111 QDGDIVVQPYNSLLSMRRLTQNADSVVVLDNGALTRIAADRLHVMTPSFEQTNQLVSTVMSASTTTLRYPAYSHNDLVGIVASLIPTPRCHFLMTSYTFSGENVE-QAKTVRKTTVLDVMRRLLQPKNRMVST---NPTSHKSCYMSILNIIQAKPTP 264
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_ENCCU (Tubulin gamma chain OS=Encephalitozoon cuniculi GN=TUB4 PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.650e-47 Identity = 102/235 (43.40%), Postives = 145/235 (61.70%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 E+SDVVVQPYNS+LTL RL N+DC+VV+DN++L R ++ L + PTF N L+STVM+AST+T+R+PGYM + L+P F++ YTP + + V+RK T DVMRRLL K ++ Y +TK S +S+LNI+ G D +V ++ R ++ +VNF+ W P S VAL + RVSGL L + T + SK Q++KLRK++AFLD Y+ Sbjct: 170 ESSDVVVQPYNSVLTLHRLIENSDCIVVMDNSSLGRYTLDSLRIGTPTFDHINLLISTVMAASTSTIRFPGYMYCTHQSINNCLVPLDPLKFVVPSYTPFVCDEMSRVVRKATCSDVMRRLLLPKT-RLAGYEQTKAQS---VVSMLNILHGVEDSGEVSRTVMRFLDKGMVNFVPWMPPSFNVALGKCIANETRPSRVSGLSLTNSTGASLILSKISGQFDKLRKQRAFLDIYK 400
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_ENTHI (Tubulin gamma chain OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.721e-44 Identity = 101/239 (42.26%), Postives = 148/239 (61.92%), Query Frame = 3 Query: 135 MQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVI-RKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 M E DVVV PYNS+LTL+RL VVV DN+AL I + + T NS++S+ MSA T LR+P + N L L+ L P+ HFLMT YTPL RQ N I +T+ +DVM+RL+Q +NIM ART+ + KYIS+ + QG+V +++E+LQR +R+L F+ W +I+V +R SP V+ +R+SG++LA++TSIR+ F L ++++ KK+ +L R Sbjct: 169 MVKENPDVVVSPYNSILTLRRLITECQSVVVFDNSALADITHTQFGVDEATVFDMNSIISSSMSAFTANLRFPSTLYNSLNSLMIHLCPSRFSHFLMTSYTPL---RQVNQISSRTSAIDVMKRLIQPQNIM----ARTR-LKEGKYISMCDFFQGDVSYDEINEALQRFTDRRLAEFVPWNKEAIKVVHTRVSPLVKRGNRMSGMLLANNTSIRYYFQDILKAFDQMFKKRVYLQTDR 399
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_ASHGO (Tubulin gamma chain OS=Ashbya gossypii GN=TUB4 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.001e-38 Identity = 89/237 (37.55%), Postives = 142/237 (59.92%), Query Frame = 3 Query: 150 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVE--RQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHR--VSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYR 848 S+VVVQPYN++LTL+RL N+D V+ DN AL + L N ++ QTN L+++VMS+ T +LR+P YM N L + ++L+PTP HFL +TP T + A ++ + DV+ L N MV T++ Y++I + +QG V+ + V ++ + ++R + F W P S+ V L RKSPY +A+ VSG+MLA+ +SI +F K +S ++ + K+ AFL ++ Sbjct: 179 SEVVVQPYNTILTLRRLIDNSDASVLFDNDALLNLTARVLRDSNTSYQQTNQLIASVMSSVTNSLRFPSYMYNSLPSIFSTLVPTPELHFLAPSFTPFTSDFVPGAKDFKRLSAYDVILDLFDKNNSMV-----TRDTDTPVYLAIYDALQGAVEQSDVTRAILKTQQR--IKFAPWSPTSLHVNLGRKSPYNSSANSDYVSGMMLANTSSIVSVFQKTVSSFDVIFKRGAFLHKFQ 408
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB1_GEOCN (Tubulin beta-1 chain OS=Geotrichum candidum PE=3 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 6.075e-36 Identity = 83/234 (35.47%), Postives = 135/234 (57.69%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD +V+PYN+ L++ +L NAD +DN AL I L L+ PT A N LVS VMS TT LR+PG +N+DL L +L+P PR HF M GY PL+ Q + R TV ++ ++L +KN+M +S + + +Y+++ +G+V +V + ++ ++ER F+EW P ++Q A+ P ++S +A+ TSI+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTIVEPYNATLSVHQLIENADETFCIDNEALYDICQHTLKLKQPTHADLNQLVSGVMSGITTCLRFPGQLNSDLRKLAVNLVPFPRLHFFMVGYAPLSAPGQQS-FRSLTVPELTQQLFDSKNMMAAS-----DPKRGRYLTVAAFFRGKVSIKEVEDQMRSVQERNSAYFVEWIPNNVQTAICSVPP---KDVKMSATFIANSTSIQELFKRVGDQFSAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_MYCGR (Tubulin beta chain OS=Mycosphaerella graminicola GN=TUB1 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.309e-35 Identity = 81/234 (34.62%), Postives = 133/234 (56.84%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N+D +DN AL I + L L NP++ N LVS VMS TT LR+PG +N+DL L +++P PR HF M G+ PLT R A+ R TV ++ +++ KN+M +S R +Y++ I +G+V +V + ++ ++ + F+EW P ++Q AL P ++S + + TSI+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENSDATFCIDNEALYDICMRTLKLNNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHSFRAVTVPELTQQIFDPKNMMAASDFR-----NGRYLTCSAIYRGKVSMKEVEDQIRNVQNKNTAYFVEWIPNNVQTALCSIPP---RGLKMSSTFVGNSTSIQELFKRVGDQFSAMFRRKAFLHWY 398 The following BLAST results are available for this feature:
BLAST of CX070097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 417
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070097 ID=CX070097; Name=CX070097; organism=Citrus sinensis; type=EST; length=848bpback to top |