CX070097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB2_TRIVI (Tubulin beta-2 chain OS=Trichoderma viride GN=tub2 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.552e-34 Identity = 81/234 (34.62%), Postives = 132/234 (56.41%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N+D +DN AL I + L L NP + N LVS VMS TT LR+PG +N+DL L +++P PR HF M G+ PLT A+ R TV ++ +++ KN+M +S R +Y++ +I +G+V +V + ++ ++ + F+EW P +IQ AL P ++S + + TSI+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLNNPAYGDLNYLVSAVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SPGAHSFRAVTVPELTQQMFDPKNMMAASDFR-----NGRYLTCCSIFRGKVAMKEVEDQMRNVQNKNSTYFVEWIPNNIQTALCAIPP---RGLKMSSTFIGNSTSIQELFKRVGEQFSAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB2_TRIVE (Tubulin beta-2 chain OS=Trichoderma virens PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.552e-34 Identity = 81/234 (34.62%), Postives = 132/234 (56.41%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N+D +DN AL I + L L NP + N LVS VMS TT LR+PG +N+DL L +++P PR HF M G+ PLT A+ R TV ++ +++ KN+M +S R +Y++ +I +G+V +V + ++ ++ + F+EW P +IQ AL P ++S + + TSI+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPAYGDLNYLVSAVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SPGAHSFRAVTVPELTQQMFDPKNMMAASDFR-----NGRYLTCCSIFRGKVAMKEVEDQMRNVQNKNSTYFVEWIPNNIQTALCAIPP---RGLKMSSTFIGNSTSIQELFKRVGEQFSAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_YEAST (Tubulin beta chain OS=Saccharomyces cerevisiae GN=TUB2 PE=1 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 3.334e-34 Identity = 79/234 (33.76%), Postives = 134/234 (57.26%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 +TSD VV+PYN+ L++ +L ++D +DN AL I L L P++ N+LVS+VMS TT+LRYPG +N+DL L +L+P PR HF M GY PLT + R TV ++ +++ KN+M ++ R +Y+++ +G+V +V + + +++ + F+EW P ++Q A+ +P ++ +A+ TSI+ LF + Q+ + K++AFL Y Sbjct: 174 KTSDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICQRTLKLNQPSYGDLNNLVSSVMSGVTTSLRYPGQLNSDLRKLAVNLVPFPRLHFFMVGYAPLTAIGSQS-FRSLTVPELTQQMFDAKNMMAAADPR-----NGRYLTVAAFFRGKVSVKEVEDEMHKVQSKNSDYFVEWIPNNVQTAVCSVAP---QGLDMAATFIANSTSIQELFKRVGDQFSAMFKRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_PHANO (Tubulin beta chain OS=Phaeosphaeria nodorum GN=tubA PE=1 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 3.334e-34 Identity = 80/234 (34.19%), Postives = 132/234 (56.41%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N+D +DN AL I + L L NP++ N LVS VMS TT LR+PG +N+DL L +++P PR HF M G+ PLT R A+ R TV ++ +++ KN+M +S R +Y++ +G+V +V + ++ ++ + F+EW P ++Q AL P ++S + + TSI+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSIHQLVENSDETFCIDNEALYDICMRTLKLNNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHSFRAVTVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAYFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTALCSVPP---RGLKMSATFVGNSTSIQELFKRIGDQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_PESMI (Tubulin beta chain OS=Pestalotiopsis microspora GN=TUBB PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.334e-34 Identity = 80/234 (34.19%), Postives = 133/234 (56.84%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N+D +DN AL I + L L NP++ N LVS VMS TT LR+PG +N+DL L +++P PR HF M G+ PLT R A+ R TV ++ +++ KN+M +S R +Y++ I +G+V +V + ++ ++ + F+EW P ++Q AL P ++S + + T+I+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHSFRAVTVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTALCSIPP---RGLKMSSTFVGNSTAIQELFKRIGEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB1_TRIVI (Tubulin beta-1 chain OS=Trichoderma viride GN=tub1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.334e-34 Identity = 78/234 (33.33%), Postives = 134/234 (57.26%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N+D +DN AL I + L L NP++ N LVS VMS +T+LR+PG +N+DL L +++P PR HF M G+ PLT A+ R TV ++ ++++ KN+M +S R +Y++ I +G+V +V + ++ ++ + F+EW P +IQ A + P ++S + + T+I+ +F + Q+ + ++QAFL Y Sbjct: 176 KVSDTVVEPYNATLSMHQLVENSDKTFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVSTSLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SPGAHSFRAVTVPELTQQMMDPKNMMAASDFR-----NGRYLTCSTIFRGKVAMKEVEDQMRTVQNKNSAYFVEWIPNNIQTACALSPP---RGLKISSTFVGNSTAIQEIFRRVGEQFSAMFRRQAFLHWY 400
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_COCHE (Tubulin beta chain OS=Cochliobolus heterostrophus GN=TUB1 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.354e-34 Identity = 80/234 (34.19%), Postives = 132/234 (56.41%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N+D +DN AL I + L L NP++ N LVS VMS TT LR+PG +N+DL L +++P PR HF M G+ PLT R A+ R TV ++ +++ KN+M +S R +Y++ +G+V +V + ++ ++ + F+EW P ++Q AL P ++S + + TSI+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSIHQLVENSDETFCIDNEALYDICMRTLKLNNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHSFRAVTVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAYFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTALCSIPP---RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_ASPPA (Tubulin beta chain OS=Aspergillus parasiticus GN=benR PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.354e-34 Identity = 81/234 (34.62%), Postives = 133/234 (56.84%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L ++D +DN AL I + L L NP++ N LVS VMS TT LR+PG +N+DL L +++P PR HF M G+ PLT R A+ R +V ++ +++ KN+M +S R +Y++ I +G+V +V + ++ I+ + F+EW P +IQ AL P ++S + + TSI+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHSFRAVSVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAIFRGKVSMKEVEDQMRNIQSKNQTYFVEWIPNNIQTALCSIPP---RGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_ASPOR (Tubulin beta chain OS=Aspergillus oryzae GN=benA56 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.354e-34 Identity = 81/234 (34.62%), Postives = 133/234 (56.84%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L ++D +DN AL I + L L NP++ N LVS VMS TT LR+PG +N+DL L +++P PR HF M G+ PLT R A+ R +V ++ +++ KN+M +S R +Y++ I +G+V +V + ++ I+ + F+EW P +IQ AL P ++S + + TSI+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHSFRAVSVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAIFRGKVSMKEVEDQMRNIQSKNQTYFVEWIPNNIQTALCSIPP---RGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_ASPFL (Tubulin beta chain OS=Aspergillus flavus PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.354e-34 Identity = 81/234 (34.62%), Postives = 133/234 (56.84%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L ++D +DN AL I + L L NP++ N LVS VMS TT LR+PG +N+DL L +++P PR HF M G+ PLT R A+ R +V ++ +++ KN+M +S R +Y++ I +G+V +V + ++ I+ + F+EW P +IQ AL P ++S + + TSI+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHSFRAVSVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAIFRGKVSMKEVEDQMRNIQSKNQTYFVEWIPNNIQTALCSIPP---RGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWY 398 The following BLAST results are available for this feature:
BLAST of CX070097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 417
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070097 ID=CX070097; Name=CX070097; organism=Citrus sinensis; type=EST; length=848bpback to top |