CX070097

Overview
NameCX070097
Unique NameCX070097
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_METAN (Tubulin beta chain OS=Metarhizium anisopliae PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.686e-34
Identity = 81/234 (34.62%), Postives = 133/234 (56.84%), Query Frame = 3
Query:  144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845
            + SD VV+PYN+ L++ +L  N+D    +DN AL  I +  L L NP++   N LVS VMS  TT LR+PG +N+DL  L  +++P PR HF M G+ PLT  R A+  R  +V ++ +++   KN+M +S  R       +Y++   I +G+V   +V + ++ ++ +    F+EW P +IQ AL    P      ++S   + + TSI+ LF +   Q+  + +++AFL  Y
Sbjct:  174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNYLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHSFRAVSVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPP---RGLKMSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWY 398          
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_EPITY (Tubulin beta chain OS=Epichloe typhina GN=TUBB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.686e-34
Identity = 81/234 (34.62%), Postives = 133/234 (56.84%), Query Frame = 3
Query:  144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845
            + SD VV+PYN+ L++ +L  N+D    +DN AL  I +  L L NP++   N LVS VMS  TT LR+PG +N+DL  L  +++P PR HF M G+ PLT  R A+  R  +V ++ +++   KN+M +S  R       +Y++   I +G+V   +V + ++ ++ +    F+EW P +IQ AL    P      ++S   + + TSI+ LF +   Q+  + +++AFL  Y
Sbjct:  174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNYLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHSFRAVSVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPP---RGLKMSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWY 398          
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_COPC7 (Tubulin beta chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_04743 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.686e-34
Identity = 80/234 (34.19%), Postives = 129/234 (55.13%), Query Frame = 3
Query:  144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845
            + SD VV+PYN+ L++ +L  N+D    +DN AL  I    L L  PT+   N LVS VMS  TT LR+PG +N+DL  L  +++P PR HF MTG+ PLT    A   R  TV ++ +++   KN+M +S  R       +Y+++  + +G+V   +V E +Q ++ +    F+EW P ++  A     P      +++   L + T+I+ LF +   Q+  + K++AFL  Y
Sbjct:  174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLSTPTYGDLNHLVSIVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMTGFAPLTARGSAQ-YRAVTVPELTQQMFDAKNMMAASDPR-----HGRYLTVAAVFRGKVSMKEVEEQMQNVQNKNSAYFVEWIPNNVLTAQCDIPP---RGLKMAVTFLGNSTAIQELFKRVSDQFTAMFKRKAFLHWY 398          
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_CANGA (Tubulin gamma chain OS=Candida glabrata GN=TUB4 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.427e-34
Identity = 79/238 (33.19%), Postives = 135/238 (56.72%), Query Frame = 3
Query:  150 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVER--QANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYV----QTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845
            S+VVV PYN++LTL+RL  +AD  ++ DN AL  +        N ++  TN L+S+ +S+ T +LR+P YM N +  + ++LIPTP  HFL   +TP T +        +K T  DV+  LL   N +V     T+ +    + ++ + + GEVD   +  +L ++++R  +N   W  +++ V + R+SPY+       + VSGLML++ ++I  +F +  S ++KL  K AFL+ +
Sbjct:  179 SEVVVGPYNTVLTLRRLCEDADASIIFDNNALLNLTARTFRDPNTSYEHTNQLISSALSSITNSLRFPSYMYNSMASIFSTLIPTPELHFLTPNFTPFTPDYIIGGQRYKKNTAYDVLLDLLDPFNSLV-----TQRSDMVTHFNVFSTVIGEVDQNHILRALPKMQQR--LNMPSWSTSALNVNIGRRSPYLPPLESRENSVSGLMLSNTSAITSVFERSASAFDKLFYKGAFLNQF 409          
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_GIBZE (Tubulin beta chain OS=Gibberella zeae GN=TUB2 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.427e-34
Identity = 82/234 (35.04%), Postives = 132/234 (56.41%), Query Frame = 3
Query:  144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845
            + SD VV+PYN+ L++ +L  N+D    +DN AL  I +  L L NP++   N LVS VMS  TT LR+PG +N+DL  L  +++P PR HF M G+ PLT  R A+  R  +V ++ +++   KN+M +S  R       +Y++   I +G V   +V + ++ ++ +    F+EW P +IQ AL    P   T   +S   + + TSI+ LF +   Q+  + +++AFL  Y
Sbjct:  174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNYLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHSFRAVSVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAIFRGRVAMKEVEDQMRNVQSKNSSYFVEWIPNNIQTALCAIPPRGLT---MSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWY 398          
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_GIBFU (Tubulin beta chain OS=Gibberella fujikuroi GN=TUB2 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.427e-34
Identity = 82/234 (35.04%), Postives = 132/234 (56.41%), Query Frame = 3
Query:  144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845
            + SD VV+PYN+ L++ +L  N+D    +DN AL  I +  L L NP++   N LVS VMS  TT LR+PG +N+DL  L  +++P PR HF M G+ PLT  R A+  R  +V ++ +++   KN+M +S  R       +Y++   I +G V   +V + ++ ++ +    F+EW P +IQ AL    P   T   +S   + + TSI+ LF +   Q+  + +++AFL  Y
Sbjct:  174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNYLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHSFRAVSVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAIFRGRVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPPRGLT---MSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWY 398          
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_UROFA (Tubulin beta chain OS=Uromyces fabae GN=TBB1 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.699e-34
Identity = 80/234 (34.19%), Postives = 131/234 (55.98%), Query Frame = 3
Query:  144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845
            + SD VV+PYN+ L++ +L  N+D    +DN AL  I    L L  PT+   N LVS VMS  TT LR+PG +N+DL  L  +++P PR HF M G+ PLT  R +   R  TV ++  ++   KN+M +S  R       +Y+++    +G+V   +V E++  ++ +    F+EW P ++Q A    +P    AH++S   + + T+I+ LF +   Q+  + +++AFL  Y
Sbjct:  174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLATPTYGDLNHLVSIVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTA-RGSQQYRAITVPELTSQMFDAKNMMAASDPR-----HGRYLTVAAYFRGKVSMKEVEENMLSVQNKNSNYFVEWIPNNVQTAHCDIAP---RAHKMSVTFIGNSTAIQDLFKRVADQFTAMFRRKAFLHWY 398          
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_ACRCO (Tubulin beta chain OS=Acremonium coenophialum GN=TUB2 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.699e-34
Identity = 81/234 (34.62%), Postives = 133/234 (56.84%), Query Frame = 3
Query:  144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845
            + SD VV+PYN+ L++ +L  N+D    +DN AL  I +  L L NP++   N LVS VMS  TT LR+PG +N+DL  L  +++P PR HF M G+ PLT  R A+  R  +V ++ +++   KN+M +S  R       +Y++   I +G+V   +V + ++ ++ +    F+EW P +IQ AL    P      ++S   + + TSI+ LF +   Q+  + +++AFL  Y
Sbjct:  174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNYLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHSFRAVSVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPP---RDLKMSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWY 398          
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB1_TRIVE (Tubulin beta-1 chain OS=Trichoderma virens PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.654e-33
Identity = 79/234 (33.76%), Postives = 134/234 (57.26%), Query Frame = 3
Query:  144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845
            + SD VV+PYN+ L++ +L  N+D    +DN AL  I +  L L NP++   N LVS VMS  +T+LR+PG +N+DL  L  +++P PR HF M G+ PLT    A+  R  +V ++ +++L  KN+M +S  R       +Y++   I +G+V   +V + ++ I+ +    F+EW P +IQ AL    P      ++S   + + T+I+ +F +   Q+  + +++AFL  Y
Sbjct:  174 KVSDTVVEPYNATLSMHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVSTSLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SPGAHSFRAVSVPELTQQMLDPKNMMAASDFR-----NGRYLTCSTIFRGKVAMKEVEDQMRSIQNKNSTYFVEWIPNNIQTALCSIPP---KGLKISSTFVGNSTAIQEIFRRVGEQFTAMFRRKAFLHWY 398          
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB1_EMENI (Tubulin beta-1 chain OS=Emericella nidulans GN=benA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.654e-33
Identity = 81/234 (34.62%), Postives = 132/234 (56.41%), Query Frame = 3
Query:  144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845
            + SD VV+PYN+ L++ +L  ++D    +DN AL  I +  L L NP++   N LVS VMS  TT LR+PG +N+DL  L  +++P PR HF M G+ PLT  R A   R  +V ++ +++   KN+M +S  R       +Y++   I +G+V   +V + ++ I+ +    F+EW P +IQ AL    P      ++S   + + TSI+ LF +   Q+  + +++AFL  Y
Sbjct:  174 KVSDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAYSFRAVSVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAIFRGKVSMKEVEDQMRNIQSKNQSYFVEWIPNNIQTALCSIPP---RGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWY 398          
The following BLAST results are available for this feature:
BLAST of CX070097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 417
Match NameE-valueIdentityDescription
TBB_METAN5.686e-3434.62Tubulin beta chain OS=Metarhizium anisopliae PE=3 ... [more]
TBB_EPITY5.686e-3434.62Tubulin beta chain OS=Epichloe typhina GN=TUBB PE=... [more]
TBB_COPC75.686e-3434.19Tubulin beta chain OS=Coprinopsis cinerea (strain ... [more]
TBG_CANGA7.427e-3433.19Tubulin gamma chain OS=Candida glabrata GN=TUB4 PE... [more]
TBB_GIBZE7.427e-3435.04Tubulin beta chain OS=Gibberella zeae GN=TUB2 PE=3... [more]
TBB_GIBFU7.427e-3435.04Tubulin beta chain OS=Gibberella fujikuroi GN=TUB2... [more]
TBB_UROFA9.699e-3434.19Tubulin beta chain OS=Uromyces fabae GN=TBB1 PE=3 ... [more]
TBB_ACRCO9.699e-3434.62Tubulin beta chain OS=Acremonium coenophialum GN=T... [more]
TBB1_TRIVE1.654e-3333.76Tubulin beta-1 chain OS=Trichoderma virens PE=2 SV... [more]
TBB1_EMENI1.654e-3334.62Tubulin beta-1 chain OS=Emericella nidulans GN=ben... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14G03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14G03-M6-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070097 ID=CX070097; Name=CX070097; organism=Citrus sinensis; type=EST; length=848bp
TTTAAGTGAAATATTTCACTCATGAATTTTGAAGTTTACTGTTTGGTTAT
ATGAATCTTATTTGGATGAATCCATAAGTACTCTGGAAAACAAAAAGACA
AATAAAATGACCGCTCAGTAGGGGCAGATGAACTATGCAGATGGAGACAA
GTGATGTGGTGGTCCAACCGTACAACTCTCTCTTGACACTCAAGCGACTG
ACCCTAAATGCTGATTGTGTTGTTGTTCTTGACAATACTGCACTGAATCG
AATTGCTGTGGAGCGCCTACATCTGCAAAATCCTACATTTGCTCAAACTA
ATTCATTGGTTTCCACTGTAATGTCTGCAAGCACAACCACATTGAGGTAT
CCAGGATACATGAATAATGACTTGGTTGGTCTTCTTGCCTCTCTAATTCC
AACGCCGAGATGCCATTTTCTCATGACAGGATACACACCCCTAACTGTGG
AACGTCAAGCTAATGTGATCCGTAAAACTACTGTACTAGATGTTATGAGA
AGACTGCTGCAGACCAAAAATATCATGGTTTCTTCTTACGCTCGTACAAA
AGAAGCTAGTCAGGCTAAGTACATTTCTATATTGAATATCATTCAAGGAG
AGGTGGACCCTACTCAGGTGCATGAAAGTTTACAGAGGATTCGTGAAAGA
AAGCTTGTCAACTTTATTGAGTGGGGCCCTGCAAGTATTCAGGTTGCTCT
CTCTAGAAAGTCGCCATACGTTCAAACTGCACATAGGGTTAGTGGTCTCA
TGCTGGCAAGCCATACTAGTATCAGGCATCTCTTCAGCAAATGTTTGAGC
CAATATGAGAAGTTGCGAAAAAAGCAAGCCTTTCTTGACAACTACCGA
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