CX070097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_TRIRU (Tubulin beta chain OS=Trichophyton rubrum PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.161e-33 Identity = 78/229 (34.06%), Postives = 132/229 (57.64%), Query Frame = 3 Query: 150 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFL 836 SD VV+PYN+ L++ +L ++D +DN AL I + L L NP++ N LVS VMS +T+LR+PG +N+DL L +++P PR HF M G+ PLT R A R +V ++ +++ KN+M ++ R+ +Y++ I +G+V +V + ++ I+ + F+EW P ++Q AL P ++S + + TSI+ LF + Q+ + +K+AFL Sbjct: 176 SDTVVEPYNATLSIHQLVEHSDETFCIDNEALYNICMRTLKLTNPSYGDLNHLVSAVMSGVSTSLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRNAYSFRAVSVPELTQQMFDPKNMMAATDFRS-----GRYLTCSAIFRGKVSMKEVEDQMRNIQNKNSAYFVEWIPNNVQTALCSIPP---RGLQMSSTFVGNSTSIQELFKRVGDQFTAMFRKKAFL 395
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_CEPAC (Tubulin beta chain OS=Cephalosporium acremonium GN=TUB2 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.161e-33 Identity = 80/234 (34.19%), Postives = 133/234 (56.84%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L ++D +DN AL I + L L NP++ N LVS VMS TT LR+PG +N+DL L +++P PR HF M G+ PLT R A+ R +V ++ +++ KN+M +S R +Y++ I +G+V +V + ++ ++ + F+EW P +IQ AL P ++S + + TSI+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICMRTLKLSNPSYGDLNYLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHSFRAVSVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAIFRGKVAMKEVEDQMRNVQSKNSSYFVEWIPNNIQTALCAIPP---RGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB1_SUIBO (Tubulin beta-1 chain OS=Suillus bovinus GN=TUBB1 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.161e-33 Identity = 79/232 (34.05%), Postives = 129/232 (55.60%), Query Frame = 3 Query: 150 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 SD VV+PYN+ L++ +L N+D +DN AL I L L PT+ N LVS VMS TT LR+PG +N+DL L +++P PR HF MTG+ PLT R + R TV ++ +++ KN+M +S R +Y+++ + +G+V +V E +Q ++ + F+EW P ++ LS + +++ L + T+I+ LF + + + K++AFL Y Sbjct: 176 SDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLSTPTYGDLNHLVSFVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMTGFAPLTA-RGSQQYRAVTVPELTQQMFDAKNMMAASDPR-----HGRYLTVAAVFRGKVSMKEVEEQMQNVQNKNSAYFVEWIPNNV---LSAQCDIPPRGVKMAVTFLGNSTAIQELFKRVSDHFTAMFKRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_PNECA (Tubulin beta chain OS=Pneumocystis carinii GN=TUB-B PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.822e-33 Identity = 77/234 (32.91%), Postives = 132/234 (56.41%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N+D +DN AL I + L L +P + N LVS VMS TT LR+PG +N+DL L +++P PR HF + G+ PLT + ++ R TV ++ +++ KN+M +S R +Y+++ I +G V +V + + ++++ F+EW P ++Q AL P ++S + + TSI+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLPDPGYGDLNHLVSAVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFIVGFAPLT-SKGSHSFRSLTVPELTQQMFDAKNMMAASDPR-----HGRYLTVAAIFRGRVSMKEVEDQMHSVQQKNSSYFVEWIPNNVQTALCSIPP---RGLKMSSTFIGNSTSIQELFKRVGDQFSAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_NEUCR (Tubulin beta chain OS=Neurospora crassa GN=tub-2 PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.822e-33 Identity = 78/234 (33.33%), Postives = 133/234 (56.84%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N+D +DN AL I + L L NP++ N LVS VMS T +LR+PG +N+DL L +++P PR HF M G+ PLT R A+ R +V ++ +++ KN+M +S R +Y++ I +G+V +V + ++ ++ + F+EW P ++Q AL P ++S + + T+I+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTVSLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHHFRAVSVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTALCSIPP---RGLKMSSTFVGNSTAIQELFKRIGEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB2_COLGL (Tubulin beta-2 chain OS=Colletotrichum gloeosporioides GN=TUB2 PE=3 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 3.686e-33 Identity = 79/234 (33.76%), Postives = 132/234 (56.41%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N+D +DN AL I + L L NP++ N LVS VMS TT LR+PG +N+DL L +++P PR HF M G+ PLT R A+ R +V ++ +++ KN+M +S R +Y++ I +G+V V + ++ ++ + F+EW P ++Q AL P ++S + + T+I+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHSFRAVSVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAIFRGKVAMKDVEDQMRNVQNKNSSYFVEWIPNNVQTALCSIPP---RGLKMSSTFVGNATAIQELFKRVGEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_MELLI (Tubulin beta chain OS=Melampsora lini GN=TUB1 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.211e-33 Identity = 79/234 (33.76%), Postives = 130/234 (55.56%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N+D +DN AL I L LQ PT+ N LVS VMS TT LR+PG +N+DL L +++P PR HF M G+ PLT R + R TV ++ ++ KN+M +S R +Y+++ +G+V +V E++ ++ + F+EW P ++Q A +P ++S + + T+I+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLQTPTYGDLNHLVSIVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTA-RGSQQYRAVTVPELTSQMFDAKNMMAASDPR-----HGRYLTVAAYFRGKVSMKEVEENMLSVQSKNSNYFVEWIPNNVQTAHCDIAP---RGLKMSVTFIGNSTAIQDLFKRIADQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_PENDI (Tubulin beta chain OS=Penicillium digitatum GN=TUB2 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.401e-32 Identity = 76/234 (32.48%), Postives = 133/234 (56.84%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L ++D +DN AL I + L L P++ N LVS VMS TT+LR+PG +N+DL L +++P PR HF M G+ PLT R + R+ +V ++ +++ KN+M +S R +Y++ + +G++ +V + ++ I+ + F+EW P ++Q AL P ++S + + TSI+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICMRTLKLSQPSYGDLNHLVSAVMSGVTTSLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGGSSYRQVSVPELTQQMFDPKNMMAASDFR-----NGRYLTCSALFRGKISMKEVEDQMRNIQNKNQSYFVEWIPNNVQTALCSVPP---RGLKMSSTFVGNSTSIQELFKRVGDQFAAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB2_COLGR (Tubulin beta-2 chain OS=Colletotrichum graminicola GN=TUB2 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.401e-32 Identity = 79/234 (33.76%), Postives = 131/234 (55.98%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N+D +DN AL I + L L NP++ N LVS VMS TT LR+PG +N+DL L +++P PR HF M G+ PLT R A+ R +V ++ +++ KN+M +S R +Y++ I +G+V V + ++ + + F+EW P ++Q AL P ++S + + T+I+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLT-SRGAHSFRAVSVPELTQQMFDPKNMMAASDFR-----NGRYLTCSAIFRGKVAMKDVEDQMRNVLNKNSSYFVEWIPNNVQTALCSIPP---RGLKMSFTFVGNSTAIQELFKRVGEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBG_YEAST (Tubulin gamma chain OS=Saccharomyces cerevisiae GN=TUB4 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.389e-32 Identity = 77/238 (32.35%), Postives = 139/238 (58.40%), Query Frame = 3 Query: 147 TSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVI--RKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYV---QTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 +S+VVVQ YN++L L+RL ++D VV DN +L I+ + N TN L+ST++S+ T ++R+P YM + + + ++LIP+P HFL +TP T + + I + + DVM LL N +VS+ + Y ++ N I G V+P Q+ ++ ++++R + F W +++ V + R+SPY+ + VSG+ML++ +++ ++F + ++K+ K AFL+NY Sbjct: 177 SSEVVVQSYNTILALRRLIEDSDATVVFDNASLLNISGKVFRNPNIDLQHTNQLISTIISSVTNSIRFPSYMYSSMSSIYSTLIPSPELHFLSPSFTPFTSDYIHDDIAHKGHSSYDVMLDLLDPSNSLVST-----AMNNPTYFNVYNTIIGNVEPRQISRAMTKLQQR--IKFPSWSSSAMHVNIGRRSPYLPLQPNENEVSGMMLSNMSTVVNVFENACNTFDKVFAKGAFLNNY 407 The following BLAST results are available for this feature:
BLAST of CX070097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 417
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070097 ID=CX070097; Name=CX070097; organism=Citrus sinensis; type=EST; length=848bpback to top |