CX070097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_PLESA (Tubulin beta chain OS=Pleurotus sajor-caju PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.389e-32 Identity = 78/234 (33.33%), Postives = 128/234 (54.70%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N+D +DN AL I L L PT+ N L+S VMS TT LR+PG +N+DL L +++P PR HF M G PLT R + R TV ++ +++ KN+M +S R +Y+++ + +G+V +V E +Q ++ + F+EW P ++ A P +++ L + T+I+ LF + Q+ + K++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLTTPTYGDLNHLISIVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMPGVCPLTA-RGSQQYRAVTVPELTQQMFDAKNMMAASDPR-----HGRYLTVAAVFRGKVSMKEVEEQMQNVQNKNSAYFVEWIPNNVLTAQCDIPP---RGCKMAVTFLGNSTAIQELFKRVNDQFAAMFKRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_ENTDO (Tubulin beta chain OS=Enteroctopus dofleini PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.120e-32 Identity = 77/234 (32.91%), Postives = 129/234 (55.13%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N D +DN AL I++ L L NPT+ N LVS MS TT LR+PG +N DL L +++P PR HF M G+ PLT R + R +V D+ ++L KN+M + R +Y+++ + +G++ +V E + I+ + F+EW P +++ A+ P T +S + + T+I+ +F + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYDISLRTLKLPNPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT-SRGSQDYRMHSVSDLTQQLFDAKNMMTACDPR-----HGRYLTVAAVFRGKMSMKEVDEQMFSIQNKMSPYFVEWIPNNVKTAVCDIPP---TGLEMSATFIGNSTAIQEIFKRISEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_PORYE (Tubulin beta chain OS=Porphyra yezoensis GN=TUBB1 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.075e-32 Identity = 78/234 (33.33%), Postives = 125/234 (53.42%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN L++ +L NAD V +DN AL I L P + N LVS VMS T++LR+PG +N+DL L +L+P PR HF M GY PL+ + R TV D+ +++ KN+M R +Y++ +G+V +V E + I+ + FI+W P +I+ ++ +P T +S + + T+I+ +F + S + + K++AFL Y Sbjct: 174 KVSDTVVEPYNCTLSVHQLVENADAVFCIDNEALYNICYNTLKKPEPAYPDLNKLVSGVMSGITSSLRFPGQLNSDLRKLAVNLVPFPRLHFFMIGYAPLSAD-GVTAYRAKTVADLTKQMFDPKNMMADCDPR-----NGRYLTASAYFRGKVSTKEVEEQMDAIQTKNSGQFIDWIPNAIKASVCDVAP---TGETMSAAFIGNSTAIQDIFKRVGSHFSAMFKRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB2_HOMAM (Tubulin beta-2 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.075e-32 Identity = 77/234 (32.91%), Postives = 127/234 (54.27%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N D +DN AL I L LQNPT+ N LVS MS TT LR+PG +N DL L +++P PR HF M G+ PLT R + R TV ++ +++ KN+M + R +Y+++ I +G + +V + + I+ + F+EW P +++ A+ P ++S + + T+I+ LF + Q+ + +++AFL Y Sbjct: 179 KVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLQNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTA-RGSQQYRALTVPELTQQMFDAKNMMAACDPR-----HGRYLTVAAIFRGRMSMREVDDQMYNIQNKNSSFFVEWIPNNVKTAVCDIPP---RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWY 403
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB1_SOYBN (Tubulin beta-1 chain OS=Glycine max GN=TUBB1 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.075e-32 Identity = 78/234 (33.33%), Postives = 131/234 (55.98%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 E SD VV+PYN+ L++ +L NAD +VLDN AL I L L NP+F N L+ST MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + R T+ ++ +++ +N+M ++ R +Y++ + +G++ +V + + ++ + F+EW P +++ ++ P T +S + + TSI+ +F + Q+ + K++AFL Y Sbjct: 174 EGSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRSLTIPELTQQMWDARNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDQQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---TGLSMSSTFMGNSTSIQEMFRRVSEQFTVMFKRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_USTMA (Tubulin beta chain OS=Ustilago maydis GN=UM05828 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.322e-32 Identity = 76/234 (32.48%), Postives = 128/234 (54.70%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N+D +DN AL I + L L PT+ N LVS VMS TT LR+PG +N+DL L +++P PR HF M G++PLT R + R T+ ++ ++ +KN+M + R +Y++ +G+V V + +Q +++ F+EW P ++Q A P ++S + + T+I+ +F + Q+ + K++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYNICFKTLKLNAPTYGDLNHLVSLVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFSPLTA-RGSQSYRAVTIPEITQQAFDSKNMMTACDTRL-----GRYLTCAAYFRGKVSMKDVEDQMQSFQQKHSTQFVEWIPNNVQTAQCDIPP---RGLKMSVTFIGNSTAIQDVFKRIAEQFSAMFKRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB_PORPU (Tubulin beta chain OS=Porphyra purpurea GN=TUBB1 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.322e-32 Identity = 78/234 (33.33%), Postives = 124/234 (52.99%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN L++ +L NAD V +DN AL I L P + N LVS VMS T++LR+PG +N+DL L +L+P PR HF M GY PL+ + R TV D+ +++ KN+M R +Y++ +G V +V E + I+ + FI+W P +I+ ++ +P T +S + + T+I+ +F + S + + K++AFL Y Sbjct: 174 KVSDTVVEPYNCTLSVHQLVENADAVFCIDNEALYNICYNTLKKPEPAYPDLNKLVSGVMSGITSSLRFPGQLNSDLRKLAVNLVPFPRLHFFMIGYAPLSAD-GVTAYRAKTVADLTKQMFDPKNMMADCDPR-----NGRYLTASAYFRGHVSTKEVEEQMDAIQTKNSGQFIDWIPNAIKASVCDVAP---TGETMSAAFIGNSTAIQDIFKRVGSHFSAMFKRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB1_PEA (Tubulin beta-1 chain OS=Pisum sativum GN=TUBB1 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.322e-32 Identity = 77/234 (32.91%), Postives = 131/234 (55.98%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L NAD V+VLDN AL I L L NP+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + R +V ++ +++ KN+M ++ R +Y++ + +G++ +V E + ++ + F+EW P +++ + P T +++ + + TSI+ +F + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENADEVMVLDNEALYDICFRILKLSNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRTLSVPELTQQMWDAKNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPP---TGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB9_ARATH (Tubulin beta-9 chain OS=Arabidopsis thaliana GN=TUBB9 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.951e-32 Identity = 76/234 (32.48%), Postives = 131/234 (55.98%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L NAD +VLDN AL I L L NPTF N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + +V ++ +++ KN+M ++ R +Y++ + +G++ +V E + ++ + F+EW P +++ ++ +P T +++ + + TSI+ +F + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYSALSVPELTQQMWDAKNMMCAADPR-----HGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIAP---TGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 398
BLAST of CX070097 vs. ExPASy Swiss-Prot
Match: TBB4_CHICK (Tubulin beta-4 chain OS=Gallus gallus PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.951e-32 Identity = 76/234 (32.48%), Postives = 127/234 (54.27%), Query Frame = 3 Query: 144 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLQNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNY 845 + SD VV+PYN+ L++ +L N D +DN AL I L L PT+ N LVS MS TT+LR+PG +N DL L +++P PR HF M G+ PLT R + R TV ++ +++ KN+M + R +Y+++ + +G + +V E + I+ + F+EW P +++VA+ P ++S + + T+I+ LF + Q+ + +++AFL Y Sbjct: 174 KVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT-RRGSQQYRALTVPELTQQMFDAKNMMAACDPR-----HGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPP---RGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 398 The following BLAST results are available for this feature:
BLAST of CX070097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 417
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070097 ID=CX070097; Name=CX070097; organism=Citrus sinensis; type=EST; length=848bpback to top |