CX069970

Overview
NameCX069970
Unique NameCX069970
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX069970 vs. ExPASy Swiss-Prot
Match: BXDC2_DROME (Brix domain-containing protein 2 homolog OS=Drosophila melanogaster GN=CG11583 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.828e-44
Identity = 86/181 (47.51%), Postives = 120/181 (66.30%), Query Frame = 1 
Query:    1 ATLNELVELKSCSSCLFFECRKHKDLYLWMAKSPN--GPSVKFLVNAVHTMEELKLTGNHLKASRPLLTFSSNFGKDAHWKLIKEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIR 537
            + +NE+ E+K C+  + FE R+ +DLY+W++ +    GPS KFL+  +HTM ELK+TGN L+ SRPLL+F S F +  H KL+KE+ +Q +  P  H KS+P+ DHVF F+ +D  IWFRN+QI            GGL      EVGPR+ +NP+KIF GSF G T++ENP YVSP++ R
Sbjct:   91 SVVNEMCEMKHCNKAMLFEGRRKRDLYMWISNTSGSTGPSAKFLIENIHTMAELKMTGNCLRGSRPLLSFDSKFDELPHLKLLKELFVQTYSVPNHHPKSQPFVDHVFTFTYLDKRIWFRNFQILSED--------GGLS-----EVGPRYVMNPVKIFDGSFTGKTIWENPDYVSPSKQR 258
The following BLAST results are available for this feature:
BLAST of CX069970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
BXDC2_DROME2.828e-4447.51Brix domain-containing protein 2 homolog OS=Drosop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14A05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14A05-A10-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069970 ID=CX069970; Name=CX069970; organism=Citrus sinensis; type=EST; length=737bp
GCTACTTTGAATGAGCTTGTTGAGCTCAAGAGCTGTTCGTCCTGCTTGTT
TTTTGAGTGTAGGAAACATAAAGACCTTTATCTGTGGATGGCCAAGAGCC
CCAATGGTCCATCTGTGAAATTTTTAGTAAATGCGGTGCACACAATGGAA
GAACTGAAGCTTACTGGAAACCATCTAAAAGCGTCACGACCTCTTCTGAC
ATTCTCGTCTAATTTTGGTAAAGATGCCCACTGGAAACTTATAAAGGAAA
TGATCATTCAGATATTTGGAACTCCTAAGGAGCACAGGAAGTCTAAGCCT
TACCATGATCATGTTTTTGTTTTCTCCATTGTTGATGATCACATATGGTT
CAGGAATTACCAGATTACAGTTCCTCATAATGAATCAGATAAGGTGGCTC
GGGGAGGTCTGGACAAAATGACCCTTGTTGAGGTTGGTCCAAGATTTTGT
TTGAATCCAATTAAGATATTTGGAGGCAGCTTCGGAGGACCAACACTATA
TGAGAATCCATTTTATGTATCACCAAATCAGATTAGAGCTCTGGAGAAGA
AGAATAAGGCCGGGAAGTATGCCAAGAAAGTTAAAGCTAATACAAGGAGA
AAGATGCACGAGCTTTCCAATCCATTGGAACCTGATGAATTTGCTGATAT
GTGGAAGGAATGATGTTTACATGATGCTTTCTGTTCCGGTGAAACAACAA
GCAGATTACAGTTTGACCACCTTTTTGTAGACATCTT
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