CX069970

Overview
NameCX069970
Unique NameCX069970
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069970 vs. ExPASy Swiss-Prot
Match: BXDC2_HUMAN (Brix domain-containing protein 2 OS=Homo sapiens GN=BXDC2 PE=1 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.954e-53
Identity = 99/177 (55.93%), Postives = 129/177 (72.88%), Query Frame = 1
Query:    7 LNELVELKSCSSCLFFECRKHKDLYLWMAKSPNGPSVKFLVNAVHTMEELKLTGNHLKASRPLLTFSSNFGKDAHWKLIKEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIR 537
            +NE+ E+K+C+ C++FE +K +DLY+W++ SP+GPS KFLV  +HT+ ELK+TGN LK SRPLL+F   F +  H+ L+KE++IQIF TP+ H KS+P+ DHVF F+I+D+ IWFRN+QI     E D           LVE+GPRF LN IKIF GSFGGPTLYENP Y SPN  R
Sbjct:  103 INEVCEMKNCNKCIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALLKELLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED---------AALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHR 266          
BLAST of CX069970 vs. ExPASy Swiss-Prot
Match: BXDC2_BOVIN (Brix domain-containing protein 2 OS=Bos taurus GN=BXDC2 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.954e-53
Identity = 99/177 (55.93%), Postives = 129/177 (72.88%), Query Frame = 1
Query:    7 LNELVELKSCSSCLFFECRKHKDLYLWMAKSPNGPSVKFLVNAVHTMEELKLTGNHLKASRPLLTFSSNFGKDAHWKLIKEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIR 537
            +NE+ E+K+C+ C++FE +K +DLY+W++ SP+GPS KFLV  +HT+ ELK+TGN LK SRPLL+F   F +  H+ L+KE++IQIF TP+ H KS+P+ DHVF F+I+D+ IWFRN+QI     E D           LVE+GPRF LN IKIF GSFGGPTLYENP Y SPN  R
Sbjct:  103 INEVCEMKNCNKCIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALLKELLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED---------AALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHR 266          
BLAST of CX069970 vs. ExPASy Swiss-Prot
Match: BXDC2_RAT (Brix domain-containing protein 2 OS=Rattus norvegicus GN=Bxdc2 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.685e-53
Identity = 99/177 (55.93%), Postives = 127/177 (71.75%), Query Frame = 1
Query:    7 LNELVELKSCSSCLFFECRKHKDLYLWMAKSPNGPSVKFLVNAVHTMEELKLTGNHLKASRPLLTFSSNFGKDAHWKLIKEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIR 537
            +NE+ E+K+C+ C++FE +K +DLY+W++ SP+GPS KFLV  +HT+ ELK+TGN LK SRPLL+F   F    H+ L+KE +IQIF TP+ H KS+P+ DHVF F+I+D+ IWFRN+QI     E D           LVE+GPRF LN IKIF GSFGGPTLYENP Y SPN  R
Sbjct:  102 INEVCEMKNCNKCIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDDLPHYALLKEFLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED---------AALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHR 265          
BLAST of CX069970 vs. ExPASy Swiss-Prot
Match: BXDC2_MOUSE (Brix domain-containing protein 2 OS=Mus musculus GN=Bxdc2 PE=2 SV=3)

HSP 1 Score: 207.608 bits (527), Expect = 5.685e-53
Identity = 99/177 (55.93%), Postives = 127/177 (71.75%), Query Frame = 1
Query:    7 LNELVELKSCSSCLFFECRKHKDLYLWMAKSPNGPSVKFLVNAVHTMEELKLTGNHLKASRPLLTFSSNFGKDAHWKLIKEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIR 537
            +NE+ E+K+C+ C++FE +K +DLY+W++ SP+GPS KFLV  +HT+ ELK+TGN LK SRPLL+F   F    H+ L+KE +IQIF TP+ H KS+P+ DHVF F+I+D+ IWFRN+QI     E D           LVE+GPRF LN IKIF GSFGGPTLYENP Y SPN  R
Sbjct:  103 INEVCEMKNCNKCIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDDLPHYALLKEFLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED---------AALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHR 266          
BLAST of CX069970 vs. ExPASy Swiss-Prot
Match: BXDC2_XENLA (Brix domain-containing protein 2 OS=Xenopus laevis GN=bxdc2 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.425e-53
Identity = 96/179 (53.63%), Postives = 128/179 (71.51%), Query Frame = 1
Query:    7 LNELVELKSCSSCLFFECRKHKDLYLWMAKSPNGPSVKFLVNAVHTMEELKLTGNHLKASRPLLTFSSNFGKDAHWKLIKEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRAL 543
            +NE+ E+K+C+ C++FE +K +DLY+W++ SP GPS KFLV  +HT+ ELK++GN LK SRP+L+F   F ++  + L+KE++ QIFGTP+ H +S+P+ DH+F FSI D+ IWFRNYQI     E D           LVE+GPRF LN IKIF GSFGGPTLYENP Y SPN  R +
Sbjct:   96 VNEVCEMKNCNKCIYFEAKKKQDLYMWLSNSPEGPSAKFLVQNIHTLAELKMSGNCLKGSRPILSFDPAFDREPQYALLKELLTQIFGTPRYHPRSQPFVDHIFTFSIADNRIWFRNYQII----EED---------AALVEIGPRFVLNLIKIFKGSFGGPTLYENPHYQSPNMHRRM 261          
BLAST of CX069970 vs. ExPASy Swiss-Prot
Match: BXDC2_PONAB (Brix domain-containing protein 2 OS=Pongo abelii GN=BXDC2 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.697e-53
Identity = 98/177 (55.37%), Postives = 128/177 (72.32%), Query Frame = 1
Query:    7 LNELVELKSCSSCLFFECRKHKDLYLWMAKSPNGPSVKFLVNAVHTMEELKLTGNHLKASRPLLTFSSNFGKDAHWKLIKEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIR 537
            +NE+ E+K+C+ C++FE +K +DLY+W++ SP+GPS KFLV  +HT+ ELK+TGN LK SRPLL+F   F +  H+ L+KE++IQI  TP+ H KS+P+ DHVF F+I+D+ IWFRN+QI     E D           LVE+GPRF LN IKIF GSFGGPTLYENP Y SPN  R
Sbjct:  103 INEVCEMKNCNKCIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALLKELLIQILSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED---------AALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHR 266          
BLAST of CX069970 vs. ExPASy Swiss-Prot
Match: BRX1_YEAST (Ribosome biogenesis protein BRX1 OS=Saccharomyces cerevisiae GN=BRX1 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.022e-50
Identity = 95/179 (53.07%), Postives = 126/179 (70.39%), Query Frame = 1
Query:    7 LNELVELKSCSSCLFFECRKHKDLYLWMAKSPNGPSVKFLVNAVHTMEELKLTGNHLKASRPLLTFSSNFGKDAHWKLIKEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVA-RGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRA 540
            LNE+ EL +C++ LFFE RKH+DLYLW++K PNGP++KF +  +HTM+EL  TGN LK SRP+L+F   F    H++LIKE+++  F  P   RKSKP+ DHV  FSIVDD IW R Y+I+  H+  +K     G + ++LVE+GPRF +  I I  GSFGGP +YEN  YVSPN +RA
Sbjct:   74 LNEIAELYNCNNVLFFEARKHQDLYLWLSKPPNGPTIKFYIQNLHTMDELNFTGNCLKGSRPVLSFDQRFESSPHYQLIKELLVHNFCVPPNARKSKPFIDHVMSFSIVDDKIWVRTYEIS--HSTKNKEEYEDGEEDISLVEIGPRFVMTVILILEGSFGGPKIYENKQYVSPNVVRA 250          
BLAST of CX069970 vs. ExPASy Swiss-Prot
Match: BXDC2_DICDI (Brix domain-containing protein 2 homolog OS=Dictyostelium discoideum GN=bxdc2 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.958e-45
Identity = 89/178 (50.00%), Postives = 115/178 (64.61%), Query Frame = 1
Query:    7 LNELVELKSCSSCLFFECRKHKDLYLWMAKSPNGPSVKFLVNAVHTMEELKLTGNHLKASRPLLTFSSNFGKDAHWKLIKEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRA 540
            +NE  E+KSC+  + F+ RK  D +LWMAK+P GP+VKF +  VHT++EL++TGN LK SRP L F  +F  + H +LIKE+I QI+ TPK H KSKP+ DHVF F   D  IWFRNYQI+    + D +         L E+GPR  ++  KIF   FGG  LY NP YVSPN  R+
Sbjct:  118 INETCEMKSCNYAILFDVRKGTDCFLWMAKTPLGPTVKFHITNVHTLDELQMTGNCLKGSRPFLHFDKSFDSEVHLQLIKELITQIYSTPKGHVKSKPFFDHVFSFFYQDGRIWFRNYQISDQEFKKDSL---------LTEIGPRMIMHIDKIFSDGFGGSVLYSNPNYVSPNNTRS 286          
BLAST of CX069970 vs. ExPASy Swiss-Prot
Match: BXDC2_CAEEL (Brix domain-containing protein 2 homolog OS=Caenorhabditis elegans GN=K12H4.3 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.958e-45
Identity = 90/178 (50.56%), Postives = 120/178 (67.42%), Query Frame = 1
Query:    7 LNELVELKSCSSCLFFECRKHKDLYLWMAKSPNGPSVKFLVNAVHTMEELKLTGNHLKASRPLLTFSSNFGKDAHWKLIKEMIIQIFGTPKEHRKSKPYHDHVFVFSIVD-DHIWFRNYQITVPHNESDKVARGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIR 537
            LNE+ E+K+C+  ++FE RK KD YLWM+    GPS+KFLV+ VHTM+ELK++GN L+ASRP+L+F   F K    KLIK +++Q  GTP  H +S+P+ DHVF FS+ + D IWFRN+QI               + + L EVGPRF L  +++F GSF G  LY+NP YVSPN IR
Sbjct:  106 LNEIAEMKNCTKVMYFESRKRKDTYLWMSNVEKGPSIKFLVHNVHTMKELKMSGNCLRASRPVLSFDDAFDKKPQLKLIKAVLMQTLGTPHHHPRSQPFVDHVFNFSVGEGDKIWFRNFQIVD-------------ESLQLQEVGPRFVLEMVRLFAGSFEGAVLYDNPNYVSPNVIR 270          
BLAST of CX069970 vs. ExPASy Swiss-Prot
Match: BRX1_SCHPO (Ribosome biogenesis protein Brix homolog OS=Schizosaccharomyces pombe GN=SPBC800.06 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.269e-44
Identity = 87/178 (48.88%), Postives = 119/178 (66.85%), Query Frame = 1
Query:    7 LNELVELKSCSSCLFFECRKHKDLYLWMAKSPNGPSVKFLVNAVHTMEELKLTGNHLKASRPLLTFSSNFGKDAHWKLIKEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRA 540
            LNEL EL +C++  FFE R+ +DLYL +A++PNGP+VKF V  +HTM+EL +TGN LK SRP+L+F   F    H K++KE++ Q FG PK  R+SKP+ D V   +I D  IWFRNY+I    ++S        D +TL+E+GPRF +  I I  GSFGGP +Y+N  +VS   +RA
Sbjct:   86 LNELAELYNCNNIFFFESRRREDLYLHIARAPNGPTVKFHVENLHTMDELNMTGNALKGSRPILSFDKTFDTAPHLKVVKELLQQTFGIPKGARRSKPFIDRVCTLTIADGKIWFRNYEIRENEDKSK-------DPVTLIEIGPRFVMTIINILEGSFGGPVIYKNDTFVSSTMVRA 256          
The following BLAST results are available for this feature:
BLAST of CX069970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
BXDC2_HUMAN1.954e-5355.93Brix domain-containing protein 2 OS=Homo sapiens G... [more]
BXDC2_BOVIN1.954e-5355.93Brix domain-containing protein 2 OS=Bos taurus GN=... [more]
BXDC2_RAT5.685e-5355.93Brix domain-containing protein 2 OS=Rattus norvegi... [more]
BXDC2_MOUSE5.685e-5355.93Brix domain-containing protein 2 OS=Mus musculus G... [more]
BXDC2_XENLA7.425e-5353.63Brix domain-containing protein 2 OS=Xenopus laevis... [more]
BXDC2_PONAB9.697e-5355.37Brix domain-containing protein 2 OS=Pongo abelii G... [more]
BRX1_YEAST2.022e-5053.07Ribosome biogenesis protein BRX1 OS=Saccharomyces ... [more]
BXDC2_DICDI1.958e-4550.00Brix domain-containing protein 2 homolog OS=Dictyo... [more]
BXDC2_CAEEL1.958e-4550.56Brix domain-containing protein 2 homolog OS=Caenor... [more]
BRX1_SCHPO1.269e-4448.88Ribosome biogenesis protein Brix homolog OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14A05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14A05-A10-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069970 ID=CX069970; Name=CX069970; organism=Citrus sinensis; type=EST; length=737bp
GCTACTTTGAATGAGCTTGTTGAGCTCAAGAGCTGTTCGTCCTGCTTGTT
TTTTGAGTGTAGGAAACATAAAGACCTTTATCTGTGGATGGCCAAGAGCC
CCAATGGTCCATCTGTGAAATTTTTAGTAAATGCGGTGCACACAATGGAA
GAACTGAAGCTTACTGGAAACCATCTAAAAGCGTCACGACCTCTTCTGAC
ATTCTCGTCTAATTTTGGTAAAGATGCCCACTGGAAACTTATAAAGGAAA
TGATCATTCAGATATTTGGAACTCCTAAGGAGCACAGGAAGTCTAAGCCT
TACCATGATCATGTTTTTGTTTTCTCCATTGTTGATGATCACATATGGTT
CAGGAATTACCAGATTACAGTTCCTCATAATGAATCAGATAAGGTGGCTC
GGGGAGGTCTGGACAAAATGACCCTTGTTGAGGTTGGTCCAAGATTTTGT
TTGAATCCAATTAAGATATTTGGAGGCAGCTTCGGAGGACCAACACTATA
TGAGAATCCATTTTATGTATCACCAAATCAGATTAGAGCTCTGGAGAAGA
AGAATAAGGCCGGGAAGTATGCCAAGAAAGTTAAAGCTAATACAAGGAGA
AAGATGCACGAGCTTTCCAATCCATTGGAACCTGATGAATTTGCTGATAT
GTGGAAGGAATGATGTTTACATGATGCTTTCTGTTCCGGTGAAACAACAA
GCAGATTACAGTTTGACCACCTTTTTGTAGACATCTT
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