CX069794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.233e-12 Identity = 47/141 (33.33%), Postives = 68/141 (48.23%), Query Frame = 3 Query: 117 AGELRLHRDISELNLPKTCSI-TFPNGKDD---LMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNIL-REDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESN 524 A RL +++ E+ + C + F N + D L+ ++ I PD Y G F YP + PK+ KTK+YHPNID +G VCL ++ E+WKP + +I L L P E PL + A + K F N Sbjct: 2 AASRRLMKELEEI---RKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKN 139
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.233e-12 Identity = 47/141 (33.33%), Postives = 68/141 (48.23%), Query Frame = 3 Query: 117 AGELRLHRDISELNLPKTCSI-TFPNGKDD---LMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNIL-REDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESN 524 A RL +++ E+ + C + F N + D L+ ++ I PD Y G F YP + PK+ KTK+YHPNID +G VCL ++ E+WKP + +I L L P E PL + A + K F N Sbjct: 2 AASRRLMKELEEI---RKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKN 139
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.233e-12 Identity = 47/141 (33.33%), Postives = 68/141 (48.23%), Query Frame = 3 Query: 117 AGELRLHRDISELNLPKTCSI-TFPNGKDD---LMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNIL-REDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESN 524 A RL +++ E+ + C + F N + D L+ ++ I PD Y G F YP + PK+ KTK+YHPNID +G VCL ++ E+WKP + +I L L P E PL + A + K F N Sbjct: 2 AASRRLMKELEEI---RKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKN 139
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.222e-12 Identity = 45/135 (33.33%), Postives = 65/135 (48.15%), Query Frame = 3 Query: 114 SAGELRLHRDISELNL--PKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPN-YEDPLNHEAAAVLRDNPK 509 SA R+ R+++ELN+ P CS P G + I P Y GG F YP + PK+ KT++YH N+D G++ +NILR+ W P L I ++ + +F +P Y L A L D K Sbjct: 35 SASGKRIQREMAELNIDPPPDCSAG-PKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREK 168
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.202e-12 Identity = 35/110 (31.82%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 195 KDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED--------WKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLR 497 +++L ++V ++ P + +Y GG F P YP+E PK+ ++++HPNI +G +C++IL D W P I T++ + LF +PN + P N +AA R Sbjct: 27 ENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGMTWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYR 136
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC84_DROME (Ubiquitin-conjugating enzyme E2-18 kDa OS=Drosophila melanogaster GN=Ubc84D PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 7.202e-12 Identity = 43/138 (31.16%), Postives = 68/138 (49.28%), Query Frame = 3 Query: 117 AGELRLHRDISELNLPKTCSITFPNGKDD-LMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED-WKPVLNINTIIYGLFHLFTQPNYEDPLNHE-AAAVLRDNPKLFES 521 A RL R++S+L K ++ D+ L+ + + P++ Y G F P YP PK+ KTK+YHPN+D +G VCL I+ D WKP ++ L + P E PL + A +R++ K ++ Sbjct: 2 AATRRLTRELSDLVEAKMSTLRNIESSDESLLMWTGLLVPEKAPYNKGAFRIEINFPPQYPFMPPKILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVREHKKFMKT 139
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.406e-12 Identity = 32/86 (37.21%), Postives = 49/86 (56.98%), Query Frame = 3 Query: 246 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDN 503 + GGTF ++ YP APKV+ TK+YHPN+D + L+IL++ W P L I T++ + L PN +DPL ++ + N Sbjct: 48 FEGGTFKRELLLAEEYPMAAPKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDVVEQWKTN 133
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.604e-11 Identity = 42/134 (31.34%), Postives = 65/134 (48.51%), Query Frame = 3 Query: 129 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGY-YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNIL----REDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLF 515 RL +++ L + IT KD + + I Y G F + YP E P+V+ T +YHPNID G +CL+IL + W+P LNI T++ + L +PN +DPL + ++ + N F Sbjct: 6 RLKKELHMLAIEPPPGITCWQEKDQVADLRAQILGGANTPYEKGVFTLEVIIPERYPFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFKYNKIAF 139
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.604e-11 Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 3 Query: 291 YPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAA 485 YP+ AP VK T +HPN+D GN+CL+IL++ W + ++ TI+ L L +PN E PLN AA Sbjct: 89 YPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAA 153
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.604e-11 Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 3 Query: 246 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAA 485 + G + + S YP + PKVK +T +HPN+D+ GN+CL+IL++ W ++ TI+ + L +PN PLN +AA Sbjct: 79 FEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAA 158 The following BLAST results are available for this feature:
BLAST of CX069794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069794 ID=CX069794; Name=CX069794; organism=Citrus sinensis; type=EST; length=794bpback to top |