CX069794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 1.568e-91 Identity = 160/184 (86.96%), Postives = 171/184 (92.93%), Query Frame = 3 Query: 33 MIKLFKVKEKQRENAENAN-GKTPVKKQSAGELRLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 581 MI LFKVKEKQRE A+NA G VKKQSAGELRLH+DISELNLP +CSI+FPNGKDDLMNFEVSI+PD+GYY GTFVFTFQVSP+YPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINT+IYGLFHLFT+PN EDPLNH+AAAVLRDNPKLFE+NVRRAM GGYVGQTFF RCI Sbjct: 1 MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLMNFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFFPRCI 184
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 6.816e-87 Identity = 152/185 (82.16%), Postives = 169/185 (91.35%), Query Frame = 3 Query: 33 MIKLFKVKEKQRENAENANGK--TPVKKQSAGELRLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 581 MI LFKVKEKQRE +++ NG+ + VKKQSAGELRLH+DISELNLPK+C I+FPNGK+DLMNFEV+I+PDEGYY+ G FVF+FQVS +YPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINT+IYGLFHLFT+PNYEDPLNHEAAAVLRDNPK FE NVRRAM GG VGQT F RC+ Sbjct: 1 MIGLFKVKEKQREESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDLMNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQVGQTSFPRCM 185
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.806e-63 Identity = 115/183 (62.84%), Postives = 144/183 (78.69%), Query Frame = 3 Query: 33 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 581 MIKLF +K++++E K KK SA +LR+ +DI+ELNLPKTC I F + DDL+NF++ I PDEG+Y GG FVF+F+V YPH+ PKVKC+T VYHPNIDLEGNVCLNILREDWKPVL IN+IIYGL +LF +PN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+ Sbjct: 1 MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCEIEFSD-HDDLLNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.806e-63 Identity = 115/183 (62.84%), Postives = 144/183 (78.69%), Query Frame = 3 Query: 33 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 581 MIKLF +K++++E K KK SA +LR+ +DI+ELNLPKTC I F + DDL+NF++ I PDEG+Y GG FVF+F+V YPH+ PKVKC+T VYHPNIDLEGNVCLNILREDWKPVL IN+IIYGL +LF +PN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+ Sbjct: 1 MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDITELNLPKTCEIEFSD-HDDLLNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 5.255e-63 Identity = 114/183 (62.30%), Postives = 144/183 (78.69%), Query Frame = 3 Query: 33 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 581 MIKLF +K++++E K KK SA +LR+ +DI+ELNLPKTC I+F + DDL+NF++ I PDEG+Y G FVF+F+V YPH+ PKVKC+T VYHPNIDLEGNVCLNILREDWKPVL IN+IIYGL +LF +PN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+ Sbjct: 1 MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISFSD-PDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 5.255e-63 Identity = 114/183 (62.30%), Postives = 144/183 (78.69%), Query Frame = 3 Query: 33 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 581 MIKLF +K++++E K KK SA +LR+ +DI+ELNLPKTC I+F + DDL+NF++ I PDEG+Y G FVF+F+V YPH+ PKVKC+T VYHPNIDLEGNVCLNILREDWKPVL IN+IIYGL +LF +PN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+ Sbjct: 1 MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISFSD-PDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 5.255e-63 Identity = 114/183 (62.30%), Postives = 144/183 (78.69%), Query Frame = 3 Query: 33 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 581 MIKLF +K++++E K KK SA +LR+ +DI+ELNLPKTC I+F + DDL+NF++ I PDEG+Y G FVF+F+V YPH+ PKVKC+T VYHPNIDLEGNVCLNILREDWKPVL IN+IIYGL +LF +PN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+ Sbjct: 1 MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISFSD-PDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58 Identity = 107/183 (58.47%), Postives = 141/183 (77.05%), Query Frame = 3 Query: 33 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 581 MIKLF +K+++++ + + + KK SA +LR+ +DI+ELNLP TC+ FP+ +DL+NF++ I PDEG+Y G FVF F+V YPHE PKVKC T+VYHPNIDL+GNVCLNILREDW PVLNIN+I+YGL LF +PN EDPLN EAA VL+ N + FE+NV++AM GG VG+T+F C+ Sbjct: 1 MIKLFTLKQQKKDGEQKGSQQ---KKASAAQLRIQKDINELNLPNTCATDFPD-PNDLLNFKLIISPDEGFYRDGRFVFNFRVGSNYPHEPPKVKCATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPEDPLNKEAADVLQTNRRQFENNVKKAMRGGCVGETYFECCL 179
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.343e-50 Identity = 98/179 (54.75%), Postives = 132/179 (73.74%), Query Frame = 3 Query: 33 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYV-GQTF 566 M+K++ +KEKQ A G + KK +A +LR+ +D+SEL+LP T FP+ +D+MNFE+++RPDEG+Y GG F F+F V+P +PHE PKVKC KVYHPNIDLEGNVCLNILREDWKPVL++N ++ GL +LF +PN DPLN +AA + N + F+ NV+ +MAGG V G+ F Sbjct: 1 MLKIWSMKEKQA-----AEGGSAKKKVTAAQLRVQKDLSELSLPSTMKTHFPSA-EDIMNFELTVRPDEGFYQGGEFRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAHQMTANREEFKRNVKHSMAGGSVAGERF 173
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.897e-45 Identity = 90/180 (50.00%), Postives = 125/180 (69.44%), Query Frame = 3 Query: 33 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPNG-KDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFF 569 M K++++K+K+ + +NA+G +P ++R+ +D+++L +P T S ++P+ K ++++ E IRPDEGYY GG F F Q+ YPH+ PKVKC K+YHPNID+EGNVCLNILR+DW PVLN+N+I+ GL LF PN EDPLN EAAA L +P+ F S VR AM GG V F Sbjct: 1 MRKIWELKKKEAQKEKNASGISPA------QIRIQKDVTDLEIPSTMSTSWPDPIKLNVLHLE--IRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVRTAMKGGLVNGISF 172 The following BLAST results are available for this feature:
BLAST of CX069794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069794 ID=CX069794; Name=CX069794; organism=Citrus sinensis; type=EST; length=794bpback to top |