CX069794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.147e-17 Identity = 47/137 (34.31%), Postives = 78/137 (56.93%), Query Frame = 3 Query: 129 RLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 530 R+H+++++L + P CS P G DD+ +++ +I P++ Y GG F T YP + PKV T++YHPNI+ G++CL+ILR W P L I+ ++ + L PN +DPL E A + + + + + R Sbjct: 5 RIHKELNDLARDPPAQCSAG-PVG-DDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAR 139
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.147e-17 Identity = 47/137 (34.31%), Postives = 78/137 (56.93%), Query Frame = 3 Query: 129 RLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 530 R+H+++++L + P CS P G DD+ +++ +I P++ Y GG F T YP + PKV T++YHPNI+ G++CL+ILR W P L I+ ++ + L PN +DPL E A + + + + + R Sbjct: 5 RIHKELNDLARDPPAQCSAG-PVG-DDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAR 139
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.147e-17 Identity = 47/137 (34.31%), Postives = 78/137 (56.93%), Query Frame = 3 Query: 129 RLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 530 R+H+++++L + P CS P G DD+ +++ +I P++ Y GG F T YP + PKV T++YHPNI+ G++CL+ILR W P L I+ ++ + L PN +DPL E A + + + + + R Sbjct: 5 RIHKELNDLARDPPAQCSAG-PVG-DDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAR 139
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.498e-17 Identity = 46/143 (32.17%), Postives = 77/143 (53.85%), Query Frame = 3 Query: 75 AENANGKTPVKKQSAGELRLHRDISELNLPKTCSIT-FPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRD 500 +++++ PVK A RLH+++ L + I+ FP+G++ P Y G T+ + YP+ AP VK T +HPN+DL+G +CL+IL++ W + ++ TI+ + L +PN E PLN +AA + D Sbjct: 18 SKHSDDSMPVKDNHAVSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMWND 160
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC12_CAEEL (NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis elegans GN=ubc-12 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.498e-17 Identity = 46/116 (39.66%), Postives = 68/116 (58.62%), Query Frame = 3 Query: 204 LMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED------WKPVLNINTIIYGLFHLFTQ-PNYEDPLNHEAAAVLRDNPKLFESNVR 530 L E+++ P EG Y GG F F V P Y + P VKC TKV+HPNI+ +G++CL+ILR++ W+P N+ +++GL LF ++ D LN +AA + N + F VR Sbjct: 58 LHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVR 173
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.498e-17 Identity = 46/126 (36.51%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 129 RLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLR 497 R+H+++++L + P CS P G DD+ +++ +I P++ Y GG F T YP + PKV T++YHPNI+ G++CL+ILR W P L I+ ++ + L PN +DPL E A + + Sbjct: 5 RIHKELNDLARDPPAQCSAG-PVG-DDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYK 128
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.957e-17 Identity = 47/140 (33.57%), Postives = 74/140 (52.86%), Query Frame = 3 Query: 114 SAGELRLHRDISELNLPKTCSIT-FPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 530 +A RL RD L I+ P + LM V PD+ + G TF + Q S YP++AP VK +K++HPN+ +G++CL+IL+ W P+ +I I+ + L PN P N E+A + R+N + + V+ Sbjct: 3 TAARRRLMRDFKRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHPNVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVK 142
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.957e-17 Identity = 46/137 (33.58%), Postives = 79/137 (57.66%), Query Frame = 3 Query: 129 RLHRDISELNL--PKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 530 R+++++++L P +CS P G +DL +++ +I P + Y GG F YP + PKV T++YHPNI+ G++CL+ILR+ W P L I+ ++ + + T PN ++PL E A V + + +E+ R Sbjct: 5 RINKELTDLGRDPPSSCSAG-PVG-EDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDEPLVPEIAHVYKTDRARYEATAR 139
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.957e-17 Identity = 46/137 (33.58%), Postives = 76/137 (55.47%), Query Frame = 3 Query: 129 RLHRDISELNL--PKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 530 R+ +++S+L P CS P G DDL +++ +I P + Y GG F T YP + PK+ TK+YHPNI+ G++CL+ILR W P L ++ ++ + L PN +DPL + A + + + + + + R Sbjct: 5 RIQKELSDLQRDPPAHCSAG-PVG-DDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAR 139
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.957e-17 Identity = 46/137 (33.58%), Postives = 76/137 (55.47%), Query Frame = 3 Query: 129 RLHRDISELNL--PKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 530 R+ +++S+L P CS P G DDL +++ +I P + Y GG F T YP + PK+ TK+YHPNI+ G++CL+ILR W P L ++ ++ + L PN +DPL + A + + + + + + R Sbjct: 5 RIQKELSDLQRDPPAHCSAG-PVG-DDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAR 139 The following BLAST results are available for this feature:
BLAST of CX069794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069794 ID=CX069794; Name=CX069794; organism=Citrus sinensis; type=EST; length=794bpback to top |