CX069794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.711e-17 Identity = 46/122 (37.70%), Postives = 70/122 (57.38%), Query Frame = 3 Query: 129 RLHRDISELNL--PKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAA 485 R+ +++++L P CS P G DDL +++ +I P++ Y GG F T YP + PKV TK+YHPNI+ G++CL+ILR W P L ++ ++ + L PN +DPL E A Sbjct: 5 RIQKELTDLQRDPPAQCSAG-PVG-DDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIA 124
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.163e-16 Identity = 44/120 (36.67%), Postives = 66/120 (55.00%), Query Frame = 3 Query: 129 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAA 485 R+ ++ +L IT D+L F+V+I P++ Y G F + YP EAPKV+ TK+YHPNID G +CL++L+ +W P L I T++ + L PN DPL ++ A Sbjct: 7 RIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVA 126
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.163e-16 Identity = 43/135 (31.85%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 129 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 530 R+ ++I L I +D+L F++++ P + Y GG F + YP P V+ TK+YHPN+D G +CL+ L++DW P L I T++ + L PN +DPL+++ A + ++N +N R Sbjct: 6 RIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAR 140
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.826e-16 Identity = 45/126 (35.71%), Postives = 73/126 (57.94%), Query Frame = 3 Query: 129 RLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLR 497 R+++++S+L + P CS P G DD+ +++ +I P++ Y GG F T YP + PKV T++YHPNI+ ++CL+ILR W P L I+ ++ + L PN +DPL E A + + Sbjct: 5 RINKELSDLARDPPAQCSAG-PVG-DDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYK 128
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.295e-16 Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 3 Query: 96 TPVKKQSAGELRLHRDISELNLPKTCSITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAM 539 TP +K RL RD L I+ +++M + I PD+ + GGTF + Q S YP++ P V+ ++++HPNI +G++CL+IL+ W P+ ++ I+ + L PN P N EAA + +N + + VR + Sbjct: 3 TPARK------RLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREVV 145
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.221e-16 Identity = 46/149 (30.87%), Postives = 76/149 (51.01%), Query Frame = 3 Query: 96 TPVKKQSAGELRLHRDISELNLPKTCSIT-FPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAM 539 TP +K RL RD L I+ P+ + + V PD+ + GGTF T Q + YP++ P V+ ++++HPNI +G++CL+IL+ W P+ ++ I+ + L PN P N EAA + +N + + VR + Sbjct: 3 TPARK------RLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVV 145
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.221e-16 Identity = 47/154 (30.52%), Postives = 79/154 (51.30%), Query Frame = 3 Query: 78 ENANGKTPVKKQSAGEL---------RLHRDISELNLPKTCSIT-FPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNP 506 +N N T K S+ + RL ++ L + T I+ FP+ +L+++ +I P + YY G F + YP+ P + + ++HPN+D+ GN+CL+IL++ W V N+ TI+ L L +PN PLN +AA + +P Sbjct: 6 QNQNPHTNSKNSSSAGMAVDGHSVTKRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDP 159
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.074e-15 Identity = 44/128 (34.38%), Postives = 69/128 (53.91%), Query Frame = 3 Query: 129 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPK 509 R+ ++ L I+ D+ F+V+I P + + GG F ++ YP APKV+ TK+YHPNID G +CL+IL++ W P L I T++ + L + PN +DPL ++ A + N K Sbjct: 7 RIIKETQRLMTEPAPGISATPATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWKTNEK 134
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.402e-15 Identity = 44/126 (34.92%), Postives = 66/126 (52.38%), Query Frame = 3 Query: 129 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDN 503 R+ ++ L I+ +D++ F V I P + Y GG F + YP APKV+ TK+YHPNID G +CL+IL++ W P L I T++ + L + PN +DPL+ A + N Sbjct: 9 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSN 134
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.831e-15 Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 231 PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDN 503 P + + GGTF + YP APKV+ TK+YHPN+D G +CL+IL++ W P L I T++ + L + PN +DPL ++ A + N Sbjct: 42 PQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTN 132 The following BLAST results are available for this feature:
BLAST of CX069794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069794 ID=CX069794; Name=CX069794; organism=Citrus sinensis; type=EST; length=794bpback to top |