CX069794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.831e-15 Identity = 45/149 (30.20%), Postives = 77/149 (51.68%), Query Frame = 3 Query: 96 TPVKKQSAGELRLHRDISELNLPKTCSITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAM 539 TP +K RL RD L I+ +++M + I PD+ + GGTF + Q S YP++ P V+ ++++HPNI +G++CL+IL+ W P+ ++ I+ + L PN P N EAA + ++ + + VR + Sbjct: 3 TPARK------RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVV 145
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.392e-15 Identity = 47/147 (31.97%), Postives = 80/147 (54.42%), Query Frame = 3 Query: 54 KEKQRENAENANGKTPVKKQSAGEL-----RLHRDISELNL--PKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPL 470 +E +RE + + + ++A +L R+ ++++E+ L P CS P G D++ + +I P Y GG F SP YP + PKV +T++YH NI+ +G +CL+IL+++W P L I+ ++ + L T N DPL Sbjct: 29 QEPEREQVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLDPPPNCSAG-PKG-DNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPL 173
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.124e-15 Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 231 PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDN 503 P + + GGTF + YP APKV+ TK+YHPN+D G +CL+IL++ W P L I T++ + L + PN +DPL ++ A + N Sbjct: 42 PQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSN 132
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.124e-15 Identity = 45/146 (30.82%), Postives = 76/146 (52.05%), Query Frame = 3 Query: 96 TPVKKQSAGELRLHRDISELNLPKTCSITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 530 TP +K RL RD L I+ +++M + I PD+ + GGTF + Q S YP++ P V+ ++++HPNI +G++CL+IL+ W P+ ++ I+ + L PN P N EAA + ++ + + VR Sbjct: 3 TPARK------RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVR 142
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.080e-15 Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 231 PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDN 503 P + + GGTF + YP APKV+ TK+YHPN+D G +CL+IL++ W P L I T++ + L + PN +DPL ++ A + N Sbjct: 42 PQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTN 132
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.080e-15 Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 231 PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDN 503 P + + GGTF + YP APKV+ TK+YHPN+D G +CL+IL++ W P L I T++ + L + PN +DPL ++ A + N Sbjct: 42 PQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTN 132
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.080e-15 Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 231 PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDN 503 P + + GGTF + YP APKV+ TK+YHPN+D G +CL+IL++ W P L I T++ + L + PN +DPL ++ A + N Sbjct: 42 PQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTN 132
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.080e-15 Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 231 PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDN 503 P + + GGTF + YP APKV+ TK+YHPN+D G +CL+IL++ W P L I T++ + L + PN +DPL ++ A + N Sbjct: 42 PQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTN 132
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.080e-15 Identity = 43/126 (34.13%), Postives = 66/126 (52.38%), Query Frame = 3 Query: 129 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDN 503 R+ ++ L I+ ++++ F V I P + Y GG F + YP APKV+ TK+YHPNID G +CL+IL++ W P L I T++ + L + PN +DPL+ A + N Sbjct: 9 RIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSN 134
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.080e-15 Identity = 47/147 (31.97%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 54 KEKQRENAENANGKTPVKKQSAGEL-----RLHRDISELNL--PKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPL 470 +E RE + + + ++A +L R+ ++++E+ L P CS P G D++ + +I P Y GG F SP YP + PKV +T++YH NI+ +G +CL+IL+++W P L I+ ++ + L T N DPL Sbjct: 29 QEPDREQVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLDPPPNCSAG-PKG-DNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPL 173 The following BLAST results are available for this feature:
BLAST of CX069794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069794 ID=CX069794; Name=CX069794; organism=Citrus sinensis; type=EST; length=794bpback to top |