CX069794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.960e-15 Identity = 40/136 (29.41%), Postives = 75/136 (55.15%), Query Frame = 3 Query: 129 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRR 533 RL RD +L ++ +D+++ +E I P E + GTF + + + YP++ P VK +K++HPN+ +G++CL+IL+ W P ++ I+ + L +PN P N AA + ++N + +E V++ Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQ 143
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.960e-15 Identity = 52/156 (33.33%), Postives = 78/156 (50.00%), Query Frame = 3 Query: 114 SAGELRLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILR-------------EDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRR 533 SA E L + + E+ N P+ S+ + K + +EV I P++ Y GG F T YP PK+K T+++HPN+ G VC++IL E W PV + TI+ + + + PN E P N +AA R+NP+ F+ VRR Sbjct: 4 SASEQLLRKQLKEIQKNPPQGFSVGLVDDKS-IFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRR 158
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.090e-15 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 231 PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDN 503 P++ + GG F + YP APKV+ TK+YHPNID G +CL++L++ W P L I TI+ + L + PN +DPL ++ A + + N Sbjct: 42 PNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVN 132
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.090e-15 Identity = 39/134 (29.10%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 129 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGY-YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNV 527 RL RD L ++ ++++M + I EG + GTF + S YP++ P V+ +K++HPN+ +G++CL+IL+ W P ++++I+ + L +PN P N +AA + ++N + +E V Sbjct: 8 RLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.090e-15 Identity = 39/134 (29.10%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 129 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGY-YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNV 527 RL RD L ++ ++++M + I EG + GTF + S YP++ P V+ +K++HPN+ +G++CL+IL+ W P ++++I+ + L +PN P N +AA + ++N + +E V Sbjct: 8 RLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.090e-15 Identity = 39/134 (29.10%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 129 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGY-YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNV 527 RL RD L ++ ++++M + I EG + GTF + S YP++ P V+ +K++HPN+ +G++CL+IL+ W P ++++I+ + L +PN P N +AA + ++N + +E V Sbjct: 8 RLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.090e-15 Identity = 39/134 (29.10%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 129 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGY-YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNV 527 RL RD L ++ ++++M + I EG + GTF + S YP++ P V+ +K++HPN+ +G++CL+IL+ W P ++++I+ + L +PN P N +AA + ++N + +E V Sbjct: 8 RLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.090e-15 Identity = 39/134 (29.10%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 129 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGY-YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNV 527 RL RD L ++ ++++M + I EG + GTF + S YP++ P V+ +K++HPN+ +G++CL+IL+ W P ++++I+ + L +PN P N +AA + ++N + +E V Sbjct: 8 RLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.090e-15 Identity = 39/134 (29.10%), Postives = 74/134 (55.22%), Query Frame = 3 Query: 129 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGY-YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNV 527 RL RD L ++ ++++M + I EG + GTF T + + YP++ P V+ +K++HPN+ +G++CL+IL+ W P ++++I+ + L +PN P N +AA + ++N + +E V Sbjct: 8 RLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CX069794 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 9.090e-15 Identity = 39/134 (29.10%), Postives = 74/134 (55.22%), Query Frame = 3 Query: 129 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGY-YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNV 527 RL RD L ++ ++++M + I EG + GTF T + + YP++ P V+ +K++HPN+ +G++CL+IL+ W P ++++I+ + L +PN P N +AA + ++N + +E V Sbjct: 8 RLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141 The following BLAST results are available for this feature:
BLAST of CX069794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069794 ID=CX069794; Name=CX069794; organism=Citrus sinensis; type=EST; length=794bpback to top |