EY701058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_CAPHI (40S ribosomal protein S18 OS=Capra hircus GN=RPS18 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 4.168e-43 Identity = 74/132 (56.06%), Postives = 100/132 (75.76%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG++KI FA+T+IKG+GRR A++V +KAD+D+ +RAGEL+ E++ ++ ++ NPRQ+KIPDWFLN KD KDGKYSQV++N LD KL +D+ERL IR HRGLRH+WGL +TVGVSKK+ Sbjct: 21 DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152 HSP 2 Score: 34.6538 bits (78), Expect = 4.168e-43 Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 57 MSLVANEDFQHILRVLNTNV 116 MSLV E FQHILRVLNTN+ Sbjct: 1 MSLVIPEKFQHILRVLNTNI 20
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_CANFA (40S ribosomal protein S18 OS=Canis familiaris GN=RPS18 PE=1 SV=3) HSP 1 Score: 162.54 bits (410), Expect = 4.168e-43 Identity = 74/132 (56.06%), Postives = 100/132 (75.76%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG++KI FA+T+IKG+GRR A++V +KAD+D+ +RAGEL+ E++ ++ ++ NPRQ+KIPDWFLN KD KDGKYSQV++N LD KL +D+ERL IR HRGLRH+WGL +TVGVSKK+ Sbjct: 21 DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152 HSP 2 Score: 34.6538 bits (78), Expect = 4.168e-43 Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 57 MSLVANEDFQHILRVLNTNV 116 MSLV E FQHILRVLNTN+ Sbjct: 1 MSLVIPEKFQHILRVLNTNI 20
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_BOVIN (40S ribosomal protein S18 OS=Bos taurus GN=RPS18 PE=2 SV=3) HSP 1 Score: 162.54 bits (410), Expect = 4.168e-43 Identity = 74/132 (56.06%), Postives = 100/132 (75.76%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG++KI FA+T+IKG+GRR A++V +KAD+D+ +RAGEL+ E++ ++ ++ NPRQ+KIPDWFLN KD KDGKYSQV++N LD KL +D+ERL IR HRGLRH+WGL +TVGVSKK+ Sbjct: 21 DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152 HSP 2 Score: 34.6538 bits (78), Expect = 4.168e-43 Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 57 MSLVANEDFQHILRVLNTNV 116 MSLV E FQHILRVLNTN+ Sbjct: 1 MSLVIPEKFQHILRVLNTNI 20
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_SPOFR (40S ribosomal protein S18 OS=Spodoptera frugiperda GN=RpS18 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.202e-42 Identity = 74/132 (56.06%), Postives = 100/132 (75.76%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DGK+K+MFA+T+IKG+GRR +NIV KKAD+D+++RAGE + E++ ++ +++NPRQ+KIPDWFLN KD DGKYSQ+ S+ LD KL +D+ERL IR HRG+RHYWGL +TVGVSKK+ Sbjct: 21 DGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 152 HSP 2 Score: 32.3426 bits (72), Expect = 1.202e-42 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 57 MSLVANEDFQHILRVLNTNV 116 MSLV + FQHILR++NTN+ Sbjct: 1 MSLVIPDKFQHILRIMNTNI 20
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_DROME (40S ribosomal protein S18 OS=Drosophila melanogaster GN=RpS18 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.410e-40 Identity = 72/132 (54.55%), Postives = 96/132 (72.73%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DGK+K+ A+T+IKG+GRR +NIV KKADVD+ +RAGE + E+D ++ +++NP Q+K+P+WFLN KD DGKY Q+ S+ LD KL DD+ERL IR+HRGLRHYWGL +TVGVSKK+ Sbjct: 21 DGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 152 HSP 2 Score: 33.4982 bits (75), Expect = 1.410e-40 Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 57 MSLVANEDFQHILRVLNTNV 116 MSLV E FQHILR++NTN+ Sbjct: 1 MSLVIPEKFQHILRIMNTNI 20
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_SCHPO (40S ribosomal protein S18 OS=Schizosaccharomyces pombe GN=rps18a PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 5.296e-40 Identity = 73/132 (55.30%), Postives = 93/132 (70.45%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DGK K+MFA+T IKG+GRR ANIVCKKAD+DM++RAGEL+ EL+ ++ ++ NP QFKIP WFLN KD DGK Q+++N +D KL +D+ERL I+ HRGLRH L KTVGVSKK+ Sbjct: 21 DGKVKVMFAMTQIKGVGRRYANIVCKKADIDMSKRAGELTTEELERIVTIIQNPSQFKIPSWFLNRQKDINDGKSFQLLANNVDSKLREDLERLKKIQTHRGLRHALDLRVRGQHTKTTGRRGKTVGVSKKK 152 HSP 2 Score: 33.8834 bits (76), Expect = 5.296e-40 Identity = 15/20 (75.00%), Postives = 18/20 (90.00%), Query Frame = 3 Query: 57 MSLVANEDFQHILRVLNTNV 116 MSLV ++FQHILR+LNTNV Sbjct: 1 MSLVVPDNFQHILRLLNTNV 20
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_DICDI (40S ribosomal protein S18 OS=Dictyostelium discoideum GN=rps18 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 3.945e-37 Identity = 67/132 (50.76%), Postives = 94/132 (71.21%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG++KI +ALT +KG+GRR AN+VCKKAD+D ++RAGELS E++ L ++ +PRQ+ IP WFLN KD KDGKYS ++N +D+K +D+ERL IR HRG+RH++GL +TVGV+ +R Sbjct: 23 DGRRKIQYALTCVKGVGRRFANLVCKKADIDTSKRAGELSKDEVERLTTIMNHPRQYNIPTWFLNRQKDIKDGKYSHCLANQIDVKFREDLERLKKIRAHRGVRHHFGLRVRGQKTKTTGRRGRTVGVAGRR 154 HSP 2 Score: 29.6462 bits (65), Expect = 3.945e-37 Identity = 15/27 (55.56%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 60 SLVANEDFQHILRVLNTNV-GREAEDY 137 SLV +FQHI+R+ NTNV GR Y Sbjct: 4 SLVFQGEFQHIIRIYNTNVDGRRKIQY 30
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_YEAST (40S ribosomal protein S18 OS=Saccharomyces cerevisiae GN=RPS18A PE=1 SV=4) HSP 1 Score: 135.576 bits (340), Expect = 8.458e-34 Identity = 60/109 (55.05%), Postives = 83/109 (76.15%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGL 444 DG KI++ALT+IKG+GRR +N+VCKKADVD+++RAGEL+ EL+ ++ ++ NP +KIP WFLN D DGK ++N ++ KL DD+ERL IR HRG+RH+WGL Sbjct: 23 DGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNPTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGL 131 HSP 2 Score: 30.4166 bits (67), Expect = 8.458e-34 Identity = 16/22 (72.73%), Postives = 17/22 (77.27%), Query Frame = 3 Query: 57 MSLVANED--FQHILRVLNTNV 116 MSLV E FQHILR+LNTNV Sbjct: 1 MSLVVQEQGSFQHILRLLNTNV 22
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_ENTHI (40S ribosomal protein S18 OS=Entamoeba histolytica GN=RPS18 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.010e-32 Identity = 61/132 (46.21%), Postives = 91/132 (68.94%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG++K+ +ALT IKG GRR A +VCK+A +D+N+RAG ++ AE++ ++ ++ +KIP WFLN KD KDGK SQ+++NA++ +L +D+E L +R HRGLRHYWGL +TVGVS+ + Sbjct: 22 DGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDILTTQLNYKIPVWFLNRQKDNKDGKDSQLIANAVETRLREDIEALKKMRAHRGLRHYWGLRVRGQNTKTTGRRGRTVGVSRTK 153 HSP 2 Score: 26.5646 bits (57), Expect = 2.010e-32 Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 60 SLVANEDFQHILRVLNTNV-GREAEDY 137 ++ + +FQH+LRV NTN+ GR Y Sbjct: 3 TVTSESEFQHMLRVCNTNLDGRRKVPY 29
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_METST (30S ribosomal protein S13P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps13p PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.212e-19 Identity = 47/132 (35.61%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG I ALT I+GIG+ A +CK D+D + + G + + + V+ NP++F IP+WFLN DY+ G+ ++ + L+M L DD+ R+ IR+++G RH GL +VGVS+ R Sbjct: 18 DGNSTIATALTEIRGIGKAFAIAICKVLDLDQDAQIGYIDDESVKQIEAVLENPQEFGIPEWFLNRRNDYETGETKHLIESDLNMTLRDDLNRMKMIRSYKGKRHEVGLPVRGQRTKSTFRHGSSVGVSRTR 149 The following BLAST results are available for this feature:
BLAST of EY701058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >EY701058 ID=EY701058; Name=EY701058; organism=Citrus sinensis; type=EST; length=878bpback to top |