EY701058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_ARATH (40S ribosomal protein S18 OS=Arabidopsis thaliana GN=RPS18A PE=1 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 1.581e-61 Identity = 108/132 (81.82%), Postives = 112/132 (84.85%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMN+RAGELSAAE+DNLM +VANPRQFKIPDWFLN KDYKDGKYSQVVSNALDMKL DD+ERL IRNHRGLRHYWGL KTVGVSKKR Sbjct: 21 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152 HSP 2 Score: 41.2022 bits (95), Expect = 1.581e-61 Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = 3 Query: 57 MSLVANEDFQHILRVLNTNV 116 MSLVANE+FQHILRVLNTNV Sbjct: 1 MSLVANEEFQHILRVLNTNV 20
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_BRABE (40S ribosomal protein S18 OS=Branchiostoma belcheri GN=RPS18 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.311e-47 Identity = 83/132 (62.88%), Postives = 104/132 (78.79%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG++KIMFALTSIKG+GRR +NIVCKKAD+D+++RAGELS E++ L+ ++ NPRQ+KIPDWFLN KD KDGKYSQV++N+LD KL +D+ERL IR HRGLRHYWGL +TVGVSKK+ Sbjct: 21 DGRRKIMFALTSIKGVGRRYSNIVCKKADIDLSKRAGELSDEEVERLITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVMANSLDNKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 152 HSP 2 Score: 33.8834 bits (76), Expect = 2.311e-47 Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 57 MSLVANEDFQHILRVLNTNV 116 MSLV E FQHILRV+NTN+ Sbjct: 1 MSLVIPEKFQHILRVMNTNI 20
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_AEQIR (40S ribosomal protein S18 OS=Aequipecten irradians GN=RPS18 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.508e-46 Identity = 82/132 (62.12%), Postives = 104/132 (78.79%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DGK+KIMFA+T+IKG+GRR AN+VCKKADVD+ +RAGELS E++ ++ +++NPRQ+KIP+WFLN KD KDGKYSQV+SNALD KL +D+ERL IR HRGLRHYWGL +TVGV+KK+ Sbjct: 21 DGKRKIMFAMTAIKGMGRRYANVVCKKADVDITKRAGELSEDEIERVITIMSNPRQYKIPNWFLNRQKDVKDGKYSQVMSNALDNKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVAKKK 152 HSP 2 Score: 32.3426 bits (72), Expect = 2.508e-46 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 57 MSLVANEDFQHILRVLNTNV 116 M+L+ E FQHILRV+NTN+ Sbjct: 1 MALIIPEKFQHILRVMNTNI 20
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_DANRE (40S ribosomal protein S18 OS=Danio rerio GN=rps18 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 8.511e-44 Identity = 75/132 (56.82%), Postives = 101/132 (76.52%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG++KI FA+T+IKG+GRR A++V +KAD+D+N+RAGEL+ E++ ++ ++ NPRQ+KIPDWFLN KD KDGKYSQV++N LD KL +D+ERL IR HRGLRH+WGL +TVGVSKK+ Sbjct: 21 DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIMQNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152 HSP 2 Score: 34.6538 bits (78), Expect = 8.511e-44 Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 57 MSLVANEDFQHILRVLNTNV 116 MSLV E FQHILRVLNTN+ Sbjct: 1 MSLVIPEKFQHILRVLNTNI 20
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_CHLRE (40S ribosomal protein S18 OS=Chlamydomonas reinhardtii GN=RPS18 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.455e-43 Identity = 76/132 (57.58%), Postives = 98/132 (74.24%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DGK KIM+A+T+I+GIGRR +N+VCKKA+VD+ + AGE SA EL+ +M +VANPR +KIPDWFLN KD+K G++SQ+ S+ LD + DD+ERL IR HRGLRHYWGL KTVGV+KK+ Sbjct: 22 DGKNKIMYAMTAIRGIGRRFSNLVCKKAEVDLRKAAGECSADELERMMGIVANPRAYKIPDWFLNRQKDHKTGRFSQLTSSQLDTVMRDDLERLKKIRGHRGLRHYWGLRVRGQHTKTTGRAGKTVGVAKKK 153 HSP 2 Score: 34.2686 bits (77), Expect = 2.455e-43 Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = 3 Query: 60 SLVANEDFQHILRVLNTNV 116 SLV +DFQHILR+LNTNV Sbjct: 3 SLVQGDDFQHILRLLNTNV 21
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_ICTPU (40S ribosomal protein S18 OS=Ictalurus punctatus GN=rps18 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.199e-43 Identity = 74/132 (56.06%), Postives = 101/132 (76.52%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG++KI FA+T+IKG+GRR A++V +KAD+D+++RAGEL+ E++ ++ ++ NPRQ+KIPDWFLN KD KDGKYSQV++N LD KL +D+ERL IR HRGLRH+WGL +TVGVSKK+ Sbjct: 21 DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152 HSP 2 Score: 34.6538 bits (78), Expect = 3.199e-43 Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 57 MSLVANEDFQHILRVLNTNV 116 MSLV E FQHILRVLNTN+ Sbjct: 1 MSLVIPEKFQHILRVLNTNI 20
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_RAT (40S ribosomal protein S18 OS=Rattus norvegicus GN=Rps18 PE=1 SV=3) HSP 1 Score: 162.54 bits (410), Expect = 4.168e-43 Identity = 74/132 (56.06%), Postives = 100/132 (75.76%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG++KI FA+T+IKG+GRR A++V +KAD+D+ +RAGEL+ E++ ++ ++ NPRQ+KIPDWFLN KD KDGKYSQV++N LD KL +D+ERL IR HRGLRH+WGL +TVGVSKK+ Sbjct: 21 DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152 HSP 2 Score: 34.6538 bits (78), Expect = 4.168e-43 Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 57 MSLVANEDFQHILRVLNTNV 116 MSLV E FQHILRVLNTN+ Sbjct: 1 MSLVIPEKFQHILRVLNTNI 20
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_PIG (40S ribosomal protein S18 OS=Sus scrofa GN=RPS18 PE=2 SV=3) HSP 1 Score: 162.54 bits (410), Expect = 4.168e-43 Identity = 74/132 (56.06%), Postives = 100/132 (75.76%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG++KI FA+T+IKG+GRR A++V +KAD+D+ +RAGEL+ E++ ++ ++ NPRQ+KIPDWFLN KD KDGKYSQV++N LD KL +D+ERL IR HRGLRH+WGL +TVGVSKK+ Sbjct: 21 DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152 HSP 2 Score: 34.6538 bits (78), Expect = 4.168e-43 Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 57 MSLVANEDFQHILRVLNTNV 116 MSLV E FQHILRVLNTN+ Sbjct: 1 MSLVIPEKFQHILRVLNTNI 20
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_MOUSE (40S ribosomal protein S18 OS=Mus musculus GN=Rps18 PE=2 SV=3) HSP 1 Score: 162.54 bits (410), Expect = 4.168e-43 Identity = 74/132 (56.06%), Postives = 100/132 (75.76%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG++KI FA+T+IKG+GRR A++V +KAD+D+ +RAGEL+ E++ ++ ++ NPRQ+KIPDWFLN KD KDGKYSQV++N LD KL +D+ERL IR HRGLRH+WGL +TVGVSKK+ Sbjct: 21 DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152 HSP 2 Score: 34.6538 bits (78), Expect = 4.168e-43 Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 57 MSLVANEDFQHILRVLNTNV 116 MSLV E FQHILRVLNTN+ Sbjct: 1 MSLVIPEKFQHILRVLNTNI 20
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_HUMAN (40S ribosomal protein S18 OS=Homo sapiens GN=RPS18 PE=1 SV=3) HSP 1 Score: 162.54 bits (410), Expect = 4.168e-43 Identity = 74/132 (56.06%), Postives = 100/132 (75.76%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG++KI FA+T+IKG+GRR A++V +KAD+D+ +RAGEL+ E++ ++ ++ NPRQ+KIPDWFLN KD KDGKYSQV++N LD KL +D+ERL IR HRGLRH+WGL +TVGVSKK+ Sbjct: 21 DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152 HSP 2 Score: 34.6538 bits (78), Expect = 4.168e-43 Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 57 MSLVANEDFQHILRVLNTNV 116 MSLV E FQHILRVLNTN+ Sbjct: 1 MSLVIPEKFQHILRVLNTNI 20 The following BLAST results are available for this feature:
BLAST of EY701058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >EY701058 ID=EY701058; Name=EY701058; organism=Citrus sinensis; type=EST; length=878bpback to top |