EY701058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_PYRHO (30S ribosomal protein S13P OS=Pyrococcus horikoshii GN=rps13p PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.594e-18 Identity = 48/132 (36.36%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG +++ +ALT+IKG+G A +VC+ A +D +AG L+ ++ + ++ +P IP W +N KDY+ GK +++ LDM + +D+ RL IR +RG+RH GL +TVGVSKK+ Sbjct: 16 DGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILQDPVSHGIPRWAVNRPKDYETGKDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPVRGQRTRSNFRRGQTVGVSKKK 147
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_PYRFU (30S ribosomal protein S13P OS=Pyrococcus furiosus GN=rps13p PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.082e-18 Identity = 48/132 (36.36%), Postives = 78/132 (59.09%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG +++ +ALT+IKGIG A +VC+ A +D +AG L+ ++ + ++A+P IP W +N KDY+ G+ +++ LDM + +D+ RL IR +RG+RH GL +TVGVS+K+ Sbjct: 16 DGNKQLRWALTAIKGIGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILADPVAHGIPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPVRGQRTRSNFRRGQTVGVSRKK 147
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_METTH (30S ribosomal protein S13P OS=Methanobacterium thermoautotrophicum GN=rps13p PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.551e-18 Identity = 44/132 (33.33%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG + + ALTSIKG+G+ L+ + A D+N+R G LS E++ L + NP ++ IP W +N DY+ G+ ++ + L+M L +D+ R+ R+++G RH GL +VGV +K+ Sbjct: 17 DGNKTMENALTSIKGVGKALSRAIIMSAGYDLNQRIGYLSDEEIERLEEAIKNPAKYNIPSWMINRRNDYETGEDKHLIESDLEMCLREDLNRMRKTRSYKGRRHELGLPVRGQRTKSTFRKGSSVGVRRKK 148
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_METKA (30S ribosomal protein S13P OS=Methanopyrus kandleri GN=rps13p PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.551e-18 Identity = 48/134 (35.82%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVA--NPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG +K+ +ALT IKGIG R+A +C++ +D ++ GELS E++ + + + + IP W N KDY+ G+ +V L+M + D++RL IR +RG+RH GL +TVGV KK+ Sbjct: 18 DGHKKVPYALTGIKGIGIRMAYAICRELGLDEEKKLGELSDEEIERIEEEIKKLSEGESNIPSWMYNRQKDYETGEDMHLVGAELEMTVKQDIDRLKKIRAYRGIRHELGLPVRGQRTKSSFRRGRTVGVKKKQ 151
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_PYRAB (30S ribosomal protein S13P OS=Pyrococcus abyssi GN=rps13p PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.033e-17 Identity = 46/132 (34.85%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG +++ +ALT+IKG+G A +VC+ A +D +AG L+ ++ + ++ +P IP W +N KDY+ G+ +++ LDM + +D+ RL IR +RG+RH GL +TVGVS+K+ Sbjct: 16 DGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILQDPVAHGIPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPVRGQRTRSNFRRGQTVGVSRKK 147
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_METJA (30S ribosomal protein S13P OS=Methanocaldococcus jannaschii GN=rps13p PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.926e-17 Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG +K++ AL I G+G +A + + A +D N+ AG L+ E+ + V+A+P +F IP W N KDY G+ V+ + L + +D+ RL IR +RG+RH GL TVGVS+++ Sbjct: 18 DGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVLADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPCRGQRTKSTFRRGPTVGVSRRK 149
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_METS3 (30S ribosomal protein S13P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps13p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.142e-16 Identity = 42/130 (32.31%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSK 507 DG + I ALT IKG+G L+ +C+ D+D + G ++ ++ + ++ NP++F IP+W LN +DY+ G+ ++ + LDM L DD+ R+ R+++G RH GL +VGV + Sbjct: 17 DGNKTIEQALTEIKGVGISLSTTMCRTLDLDSEAQIGYIADEDVLKIEEILENPQKFNIPNWMLNRREDYETGENIHLIESDLDMTLRDDLNRMKKTRSYKGRRHEAGLPVRGQRTKSTFRNSSSVGVKR 146
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_STAMF (30S ribosomal protein S13P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps13p PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16 Identity = 46/132 (34.85%), Postives = 67/132 (50.76%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG K ++ L IKG+G LA +C++ +D R G L+ E+ + +++NP + IP W LN KDY GK ++ L + D+ER I++ RG+RH GL TVGV KKR Sbjct: 19 DGSLKTVYGLAEIKGVGVNLAYGICRRLGIDPEMRIGYLTDEEIKRIEDLLSNPSAYDIPSWMLNRRKDYVTGKDMHLIGAELIFYVKQDIEREKKIKSWRGIRHALGLKVRGQRTRTTGRLGLTVGVRKKR 150
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_PYRKO (30S ribosomal protein S13P OS=Pyrococcus kodakaraensis GN=rps13p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.341e-16 Identity = 47/132 (35.61%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG +++ +ALT IKGIG A +V + A +D +AG L+ ++ + ++A+P IP W +N KDY+ GK +++ L M +DV RL IR +RG+RH GL TVGVS+++ Sbjct: 17 DGHKQVRWALTGIKGIGINFATMVLRVAGIDPFMKAGYLTDEQVKKIEEILADPVAHGIPAWAVNRPKDYETGKDMHLITAKLVMAWREDVNRLRRIRAYRGIRHELGLPVRGQRTRSNFRHGTTVGVSRRK 148
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_PICTO (30S ribosomal protein S13P OS=Picrophilus torridus GN=rps13p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.009e-15 Identity = 41/132 (31.06%), Postives = 70/132 (53.03%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 +G++ + AL +KGIG RL+ + KK D+D ++R GEL +++ L + IP W N +D GK +VSN LD+++ DD+ + +R+++G+RH GL +GV +K+ Sbjct: 23 NGERPLKLALADLKGIGLRLSETIAKKLDLDPDQRIGELGEDKIEELRKYIEGKVYDGIPYWMYNHRRDITTGKDFNLVSNDLDLQINDDINLMKKMRSYKGIRHERGLKVRGQRMRSNGRKGLAIGVVRKK 154 HSP 2 Score: 22.7126 bits (47), Expect = 1.009e-15 Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 72 NEDFQHILRVLNTNVGRE 125 NE+FQ+I+R+ N ++ E Sbjct: 8 NENFQYIVRIANKDLNGE 25 The following BLAST results are available for this feature:
BLAST of EY701058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >EY701058 ID=EY701058; Name=EY701058; organism=Citrus sinensis; type=EST; length=878bpback to top |