EY701058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_HYPBU (30S ribosomal protein S13P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps13p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15 Identity = 47/129 (36.43%), Postives = 66/129 (51.16%), Query Frame = 1 Query: 121 GKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSK 507 G K+ + L +KGIG LA +C+ +D N+R G L+ AE++ + +ANP IP W LN KDY+ GK +V L + D+ER IR+ RG+RH GL T+GV K Sbjct: 20 GDLKVPYGLALVKGIGVNLAYALCRLLGIDPNKRIGFLTDAEIEKIEKAMANPLAIGIPVWMLNRRKDYETGKDLHLVGADLIYYVKRDIEREKRIRSWRGIRHALGLKVRGQRTATTGRIGMTIGVRK 148
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_SULSO (30S ribosomal protein S13P OS=Sulfolobus solfataricus GN=rps13p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.186e-15 Identity = 44/132 (33.33%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG K+ +AL +KGIG A + +K +D N R GELS AE+ + V+++ +P W N KDY+ G +V++ L + +D+ER R+ RG+RH GL T+GV++K+ Sbjct: 17 DGTMKLPYALAMVKGIGYNTAKAIIRKLGMDPNARLGELSDAEVKKVESVISDHTIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKVRGQRTRTTGRTGMTIGVARKK 148
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS18_ENCCU (40S ribosomal protein S18 OS=Encephalitozoon cuniculi GN=RPS18 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.063e-14 Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG ++I FALT I+GIG R+A +CK+ +D+ +RAGE+ E+ + + +P IP+ ++N +D DG S ++ LD L +ER + R R GL +++GVS+K+ Sbjct: 22 DGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMKRISDAILDPASVGIPESYMNHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYRLDVGLKVRGQRTKSNGRRGRSMGVSRKK 153
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_UNCMA (30S ribosomal protein S13P OS=Uncultured methanogenic archaeon RC-I GN=rps13p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.306e-14 Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG Q + FALT IKGIG R++ I+ ++A VD + G L ++D L V+ N + +P W LN +D G+ + L M + +D+ + IR+++G+RH G TVGV +K+ Sbjct: 81 DGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDKLRAVIDN-LEANVPVWMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRHERGQKVRGQRTKSTGRTGATVGVVRKK 211
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_METTP (30S ribosomal protein S13P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps13p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.182e-13 Identity = 44/132 (33.33%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DGK+++ ALT IKG+GRRLA + KA VD G+L +++ L V+ + R IP W +N KD G V+ + L +D++ + R+++G+RH GL TVGV++K+ Sbjct: 24 DGKKQVQMALTGIKGVGRRLARVFAVKAGVDPCATLGKLPEEQIEALKNVIESVRD-NIPAWMMNRRKDIITGVDKHVMGAEVLTTLREDLDIMKKTRSYKGIRHELGLRVRGQRTRSTGRSGATVGVTRKK 154
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_THEVO (30S ribosomal protein S13P OS=Thermoplasma volcanium GN=rps13p PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.895e-13 Identity = 37/132 (28.03%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 +G++ I AL+ +KGIG RL + ++ ++ ++ GEL E++ L V N +++ +PDW LN ++ GK +V+ LD+++ +D+ + IR+++G+RH G ++GV +K+ Sbjct: 40 NGERPIPLALSDLKGIGLRLGYAIAERLNLQPTKKIGELKEDEIEKLKEYVEN-KEYDLPDWLLNHRREPVTGKNLNLVTTDLDVQVQEDINLMKKIRSYKGIRHEKGKKVRGQRTRSNGRRGLSIGVVRKK 170 HSP 2 Score: 23.0978 bits (48), Expect = 1.895e-13 Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 72 NEDFQHILRVLNTNVGRE 125 N+DFQ+I+R+ N ++ E Sbjct: 25 NKDFQYIVRIANKDLNGE 42
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_THEAC (30S ribosomal protein S13P OS=Thermoplasma acidophilum GN=rps13p PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.895e-13 Identity = 35/132 (26.52%), Postives = 75/132 (56.82%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 +G++ + AL+ +KGIG RL ++ ++ D+ ++++ GEL +L+ L V +++ +P+W LN ++ GK +VS L++++ +D+ + IR+++G+RH G ++GV +K+ Sbjct: 40 NGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLREYV-EAKEYDLPEWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKGKKVRGQRTRSNGRKGLSIGVVRKK 170 HSP 2 Score: 23.0978 bits (48), Expect = 1.895e-13 Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 72 NEDFQHILRVLNTNVGRE 125 N+DFQ+I+R+ N ++ E Sbjct: 25 NKDFQYIVRIANKDLNGE 42
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_SULTO (30S ribosomal protein S13P OS=Sulfolobus tokodaii GN=rps13p PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.439e-13 Identity = 40/132 (30.30%), Postives = 67/132 (50.76%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG K+ +AL +KGIG A + K +D + R GELS ++ + + + + ++P+W N KDY+ G +V++ L + +D+ER I++ RG+RH GL TVGV + + Sbjct: 19 DGTMKVPYALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKIENYLTDKKILEVPNWMYNRRKDYESGIDMHLVTSDLIFYVRNDIEREKKIKSWRGVRHSLGLKVRGQRTRTTGRTGVTVGVRRSK 150
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_NATPD (30S ribosomal protein S13P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps13p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.492e-13 Identity = 40/129 (31.01%), Postives = 66/129 (51.16%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVS 504 DG + + ALT + GIGRR+A I+ +KA+VD + G L ++D+++ V ++P+W N KD+ G+ + + N L M D+ R+ I +RG+RH G T+GV+ Sbjct: 27 DGTKSVERALTDMNGIGRRVARIIAEKAEVDRRDVLGALDEEKIDDVVAAVEEYGD-EVPEWLTNHQKDFFTGETTHEIGNDLQMSRRQDINRMKKIDAYRGVRHKRGQKVRGQRTKSTGRTEGTIGVN 154
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_METAC (30S ribosomal protein S13P OS=Methanosarcina acetivorans GN=rps13p PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 5.418e-13 Identity = 40/131 (30.53%), Postives = 62/131 (47.33%), Query Frame = 1 Query: 121 GKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 G + + +ALT + G+GRR A ++ K A VD + G L E+ L + +P W LN KD G+ ++ + + +D+ L +R +RGLRH GL TVGVS+K+ Sbjct: 33 GAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAKLDTAIGKFEDI-VPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRGQRTKSTGRRGSTVGVSRKK 162 HSP 2 Score: 23.0978 bits (48), Expect = 5.418e-13 Identity = 6/15 (40.00%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 72 NEDFQHILRVLNTNV 116 NE+ +H++R++NT++ Sbjct: 17 NEELRHLVRIMNTDL 31 The following BLAST results are available for this feature:
BLAST of EY701058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >EY701058 ID=EY701058; Name=EY701058; organism=Citrus sinensis; type=EST; length=878bpback to top |