EY701058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_SULAC (30S ribosomal protein S13P OS=Sulfolobus acidocaldarius GN=rps13p PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 5.867e-13 Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG K+ +AL IKGIG A I+ +K ++D ++R GE+S ++ + ++ N + P+W N KDY+ G +V++ L + +D+ER R+ RG+RH GL T+GV + + Sbjct: 18 DGTMKLPYALAMIKGIGYNTAMIIIRKLNLDKDKRLGEISDEDIKKIENLLNNKIIPESPNWIYNRQKDYESGADMHLVTSDLIFYVRNDIERERRSRSWRGVRHSLGLKVRGQRTRTTGRTGATIGVRRAK 149
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_AERPE (30S ribosomal protein S13P OS=Aeropyrum pernix GN=rps13p PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 5.867e-13 Identity = 44/132 (33.33%), Postives = 64/132 (48.48%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG K+ + L SIKGIG A V + +D ++ G L+ E+ L V+ + Q +P W N KDY+ GK ++ + L D+ER I + RG+RH +GL T+GV KKR Sbjct: 19 DGDLKLPYGLASIKGIGYTTAMAVIRMLGLDPEKKVGFLTEEEIRRLDEVLRDITQLGLPKWLYNRRKDYETGKDLHLIGSELIFYARRDIEREMKIGSWRGIRHKYGLKVRGQRTRTTGRLGMTIGVRKKR 150
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_METMA (30S ribosomal protein S13P OS=Methanosarcina mazei GN=rps13p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 9.142e-13 Identity = 41/131 (31.30%), Postives = 62/131 (47.33%), Query Frame = 1 Query: 121 GKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 G + + +ALT + GIGRR A ++ K A VD G L E+ L + + +P W LN KD G+ ++ + + +D+ L +R +RGLRH GL TVGVS+K+ Sbjct: 33 GAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDAAIGKFEEI-VPSWMLNRQKDLTTGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRGQRTKSTGRRGSTVGVSRKK 162 HSP 2 Score: 23.0978 bits (48), Expect = 9.142e-13 Identity = 6/15 (40.00%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 72 NEDFQHILRVLNTNV 116 NE+ +H++R++NT++ Sbjct: 17 NEELRHLVRIMNTDL 31
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_METBF (30S ribosomal protein S13P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps13p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.602e-12 Identity = 41/131 (31.30%), Postives = 62/131 (47.33%), Query Frame = 1 Query: 121 GKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 G + + +ALT + GIGRR A ++ K A VD G L E+ L + N +P W LN KD G+ ++ + + +D+ L +R +RGLRH GL TVGVS+++ Sbjct: 33 GAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDRAIGNFEGI-VPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRGQRTKSTGRRGSTVGVSRRK 162 HSP 2 Score: 23.0978 bits (48), Expect = 2.602e-12 Identity = 6/15 (40.00%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 72 NEDFQHILRVLNTNV 116 NE+ +H++R++NT++ Sbjct: 17 NEEIRHLVRIMNTDL 31
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_METHJ (30S ribosomal protein S13P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps13p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.912e-12 Identity = 42/132 (31.82%), Postives = 64/132 (48.48%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG + ++ +LT IKG+GR A + + A V+ N G+L A +D + VV+N +IP W N KD G ++ + M + DD+ L IR +RG+RH G VGV +K+ Sbjct: 20 DGTKPVLISLTGIKGVGRHTAKFIAETAGVEKNVLMGKLDEASVDRIREVVSNYAD-RIPVWMSNRPKDVYTGVKRHLLGADVTMTVDDDINLLKKIRAYRGIRHETGQKVRGQRTKSTGRTGLIVGVKRKK 150
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_ARCFU (30S ribosomal protein S13P OS=Archaeoglobus fulgidus GN=rps13p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.486e-12 Identity = 42/132 (31.82%), Postives = 65/132 (49.24%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG + +MFALT IKGIG R A + + VD + GEL ++ + V + +P W LN KD G+ ++S +D D+ERL ++ +RG+RH G +TVGV +++ Sbjct: 15 DGNKSLMFALTGIKGIGLRAARCIVNELGVDGRAKLGELDDETIEKVKKFVEEEIE-SLPSWLLNRRKDPYSGQDLHLLSKDVDFARMLDIERLIKMKAYRGVRHARGKKVRGQRTRSTGRKGRTVGVVRRK 145
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_NANEQ (30S ribosomal protein S13P OS=Nanoarchaeum equitans GN=rps13p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11 Identity = 41/132 (31.06%), Postives = 61/132 (46.21%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG + I L + G+ A+ VC +D + G LS EL+ L + NP ++ IP W N +D + GK +V N + + D++R I + RG RH GL +TVGV KK+ Sbjct: 22 DGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDALRNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPVRGQRTRSHHRKGRTVGVIKKK 153
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_PYRIL (30S ribosomal protein S13P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps13p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.465e-11 Identity = 39/132 (29.55%), Postives = 66/132 (50.00%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG +++ ++LT I+GIG A +C+K +D + G LS +++ L V N + P WFLN KD + GK ++ L + DV+ + +++ +G+RH GL GV+KK+ Sbjct: 17 DGNKQVAYSLTKIRGIGIATAYAICRKLGIDPHAILGALSEEQINKLDWAVRNLHELA-PAWFLNRRKDPETGKDLHLIGAELVLAAKRDVDLMKKLKSWKGVRHSLGLKVRGQRTVTTGRLGPVAGVTKKK 147
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_HALMA (30S ribosomal protein S13P OS=Haloarcula marismortui GN=rps13p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11 Identity = 40/129 (31.01%), Postives = 62/129 (48.06%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVS 504 DG + + ALT + GIG R A I+ +KADVD G+L ++ ++ V N +P+W N KDY G+ + N L + D+ R+ I ++RG+RH G T+GV+ Sbjct: 32 DGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIERVVERVENFAD-DVPEWMTNHQKDYFTGETTHETGNDLQLTRRQDINRMKMIDSYRGVRHKRGQKVRGQRTKSTGRTEGTIGVN 159
BLAST of EY701058 vs. ExPASy Swiss-Prot
Match: RS13_PYRCJ (30S ribosomal protein S13P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps13p PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11 Identity = 38/132 (28.79%), Postives = 65/132 (49.24%), Query Frame = 1 Query: 118 DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNERAGELSAAELDNLMVVVANPRQFKIPDWFLNIHKDYKDGKYSQVVSNALDMKLTDDVERLNNIRNHRGLRHYWGLXXXXXXXXXXXXXXKTVGVSKKR 513 DG + + +AL I+GIG A +C+K +D + G L +++ L V N + P WFLN KD + G+ ++ + L + DV+ + +++ +G+RH GL T GV+KK+ Sbjct: 17 DGNKTVAYALAKIRGIGIATAYAICRKLGIDPHATLGLLPEDQINKLDWAVRNLHELA-PAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVRGQRTVTTGRFGATAGVTKKK 147 The following BLAST results are available for this feature:
BLAST of EY701058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >EY701058 ID=EY701058; Name=EY701058; organism=Citrus sinensis; type=EST; length=878bpback to top |