CX047137

Overview
NameCX047137
Unique NameCX047137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: SEH1_YEAST (Nucleoporin SEH1 OS=Saccharomyces cerevisiae GN=SEH1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.179e-15
Identity = 80/326 (24.54%), Postives = 128/326 (39.26%), Query Frame = -3
Query:   88 IKIIGVGNNTSQHLAKLS--GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNE------WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADG---GWD-TSRI------DQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV------------------------------AREGDQWEGKV-------------LHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 882
            IK+  +  +TS      S   H  ++  + WA P++G I+AS S+D TV +W+E    E      W K     D K S+ S+ +AP  LGL LAC  +DG + ++ A        W  TS +         H      +SW PS             P +KL     +  +   +  +G  K+     L  H   +R ++WAP++G     IA+  +DG++ I+ +                               R     E K                D    V+ VSW+LTG IL+ A  +  V LW+     E++ ++ +
Sbjct:   33 IKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSR----------FSP-EKLAVSALEQAIIYQRGKDG--KLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSVI 345          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIO1B_SALSA (Probable cytosolic iron-sulfur protein assembly protein ciao1-B OS=Salmo salar GN=ciao1b PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.179e-15
Identity = 78/273 (28.57%), Postives = 121/273 (44.32%), Query Frame = -3
Query:   97 NNTSQHLAKLSGHKGA-VWEVAWAHPKFGSILASCSFDGTVIIW-KEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD------CFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGK-VLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW--------EEAVDGEWRQV 861
            N+T   L K + H  +  W VAW +PK G++LASC  D T+ IW +EG+S  W    V +D H+ +V  + W+P   G  LA  S D    ++  + D  ++   + + H   V  V+WAPS   G L+ +             C     VW     IW++D      C   +  HT  V+ V W P     +  +AS S D  V ++    E D WE +  L    + V+ +++  +G  LA    +  V +W        +E  D  W+ V
Sbjct:    2 NDTLALLQKFNAHPDSRCWYVAW-NPK-GTLLASCGGDRTIRIWGREGDS--WECKTVLQDGHQRTVRKVAWSP--CGNYLASASFDATTCIWKKKND-DFECLTVLEGHENEVKCVAWAPS---GNLLAT-------------CSRDKSVW-----IWEVDEENEYECVSVVNSHTQDVKHVVWHPT----QELLASCSYDNNVCVY--KEEDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDCTVKIWKECQPEGGQEGTDAAWKCV 240          

HSP 2 Score: 68.1662 bits (165), Expect = 7.253e-11
Identity = 62/208 (29.81%), Postives = 86/208 (41.35%), Query Frame = -3
Query:  265 NNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKL---------YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 861
            N+  + L  L GH+  V  VAWA    G++LA+CS D +V IW+    NE+    V   H   V  + W P +    LA  S D N+ V+    D  W+     + H    TS  W  +  P            Q+L S   D TVK+WK           +  WK  C      H   V D+AW P  G     +A+A  D  V ++
Sbjct:   92 NDDFECLTVLEGHENEVKCVAWAPS--GNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQ--ELLASCSYDNNVCVY-KEEDDDWECRATLEGH----TSTVWGLTFDPSG----------QRLASCSDDCTVKIWKECQPEGGQEGTDAAWKCVC-TLSGFHGRTVYDIAWCPLTG----ALATACGDDGVRVF 275          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CFD1_SCHPO (Probable cytosolic Fe-S cluster assembly factor C806.02c OS=Schizosaccharomyces pombe GN=SPAC806.02c PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.845e-15
Identity = 78/282 (27.66%), Postives = 114/282 (40.43%), Query Frame = -3
Query:   88 LAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGG----CDNTVKVWKLYNGIWK------MDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKV-LHDFKTPVYRVSWSLTGNILAVADGNNNVTLW------------------EEAVDGEWRQVTAV 843
            +  +SGH G +W VA AHP    + A+ S D +V I+   NSN +   HV +  H  S+  + W P E  + LA  S D  +S+   + D  W+ +   + H   V  ++W+                    C+G     C     VW     IW+       DC   LQ HT  V+ V W P   L    + S S D  +  W    +GD W     L      V+ +++S  GN LA AD + NV LW                    A+  EW+Q T++
Sbjct:  283 ITTISGHTGRLWSVA-AHPML-PLFATSSQDKSVRIY---NSNTYNLVHVIDGFHTRSIRRVAWRPIERPV-LAVASFDSVVSI-NEKIDDDWECTAALEGHENEVKCIAWS--------------------CNGNYLATCSRDKSVW-----IWEATEDDEFDCLAVLQEHTQDVKVVTWHPTEDL----LVSGSYDNSICFWR--DDGDDWALTCQLQGHTNTVWALAFSPNGNTLASADNDGNVFLWIKISSNEDVATIDSTNILRPALQEEWKQQTSL 526          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_ASHGO (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Ashbya gossypii GN=CIA1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.716e-15
Identity = 77/253 (30.43%), Postives = 116/253 (45.85%), Query Frame = -3
Query:  127 LAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGN-SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWK-------LYNGIWKMD-CFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYR---VSW-SLTGNILAVADGNNN-VTLWE 843
            LA + GH+  V  VAW+H   G+ LA+CS D +V IW+    S E+  + V ++H   V  I W  H   L LA  S D  + ++ A  D  W+ + +   H   V    W  S    A  G        +LCSG  D TV++W+       +++  W  +   PA  +HT  V  V+W+ +       IAS   DG + ++   + G +WE     D    VY    V W +L G +L V  G++  V +WE
Sbjct:   97 LAVIEGHENEVKSVAWSHD--GAYLATCSRDKSVWIWEADELSEEFECNSVLQEHSQDVKHIVW--HASRLLLASSSYDDTVRIW-AEQDDDWECAAVLSGHGGTV----WC-SDFERAETGI-------RLCSGSDDTTVRIWRCLTDDADVFDKEWIQETVLPA--VHTRAVYSVSWSAD-----GLIASVGSDGVLAVYKEVQAG-RWEVVARVDCAHTVYEINVVKWLALDGRVLLVTGGDDGCVNVWE 324          

HSP 2 Score: 68.9366 bits (167), Expect = 4.252e-11
Identity = 76/278 (27.34%), Postives = 119/278 (42.81%), Query Frame = -3
Query:   88 IKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW---KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTA-RADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMH--TDWVRDVAWAPNLGLPKSTIASASEDGKVIIW-TVAREGDQWEGKVLHDFKTP------VYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 882
            IK++ V N         + HK AV  VAW      ++LA+ SFD TV IW    +  S E     V E H++ V S+ W+ H+ G  LA  S D ++ ++ A      ++ + + Q H   V  + W  S                 L S   D+TV++W   +  W  +C   L  H  T W  D   A   G+    + S S+D  V IW  +  + D ++ + + +   P      VY VSWS  G ++A    +  + +++E   G W  V  V
Sbjct:   36 IKLVDVRNFKLVEELDDTAHKKAVRSVAWR--PHCNVLAAGSFDTTVSIWGRDDDDYSGETELLAVIEGHENEVKSVAWS-HD-GAYLATCSRDKSVWIWEADELSEEFECNSVLQEHSQDVKHIVWHASRL--------------LLASSSYDDTVRIWAEQDDDW--ECAAVLSGHGGTVWCSDFERA-ETGI---RLCSGSDDTTVRIWRCLTDDADVFDKEWIQETVLPAVHTRAVYSVSWSADG-LIASVGSDGVLAVYKEVQAGRWEVVARV 288          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CFD1_SCHJY (Probable cytosolic Fe-S cluster assembly factor SJAG_02895 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=SJAG_02895 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.716e-15
Identity = 72/244 (29.51%), Postives = 113/244 (46.31%), Query Frame = -3
Query:  109 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQW-EGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGE 834
            LSGH+G +W VA  HP    ++A+ S D +V ++ +  + E I  HV +  H  SV  + W P +  + LA  S D  +S++  + D  W+     + H   V  V+W+     G  + +         CS   D +V +W+      + DC   LQ HT  V+ VAW P   L    + S S D  +  W    +GD W +   L    + V+ +++S  G +LA  DG   V +WE+ V  E
Sbjct:  289 LSGHRGRIWSVA-VHPTL-PLVATASEDKSVRVF-QAQTGELI--HVIDGYHTRSVRRVAWRPIDRPV-LAIASFDATVSIYE-KIDDDWECVAALEGHENEVKCVAWSHD---GVYLAT---------CSR--DKSVWIWEAMEDD-EFDCLAVLQEHTQDVKVVAWHPKDDL----LVSGSYDNTIRFWR--DDGDDWVQTCELTSHTSTVWALNFSPDGRLLASGDGEGEVFIWEKLVSNE 504          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_YEAST (Cytosolic iron-sulfur protein assembly protein 1 OS=Saccharomyces cerevisiae GN=CIA1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.339e-15
Identity = 76/256 (29.69%), Postives = 111/256 (43.36%), Query Frame = -3
Query:  103 SGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDH----VFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGG-WDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST--IASASEDGKVIIWTVAR--EGDQWEG---KVLHDF-KTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWR 831
            + HK A+  VAW      S+LA+ SFD TV IW +  S +   +     + E H++ V  + W+    G  LA  S D ++ ++     G  ++   + Q H   V  V W PS A               L S   D+TV++WK Y+  W  +C   L  H   V    W+ +    +    + S S+D  V +W      E DQ E     +L D  K  VY V+W   G I +V  G + V    E VDGEW+
Sbjct:   55 TAHKKAIRSVAWR--PHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA--------------LLASSSYDDTVRIWKDYDDDW--ECVAVLNGHEGTV----WSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASV--GADGVLAVYEEVDGEWK 284          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_YEAS7 (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Saccharomyces cerevisiae (strain YJM789) GN=CIA1 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.339e-15
Identity = 76/256 (29.69%), Postives = 111/256 (43.36%), Query Frame = -3
Query:  103 SGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDH----VFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGG-WDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST--IASASEDGKVIIWTVAR--EGDQWEG---KVLHDF-KTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWR 831
            + HK A+  VAW      S+LA+ SFD TV IW +  S +   +     + E H++ V  + W+    G  LA  S D ++ ++     G  ++   + Q H   V  V W PS A               L S   D+TV++WK Y+  W  +C   L  H   V    W+ +    +    + S S+D  V +W      E DQ E     +L D  K  VY V+W   G I +V  G + V    E VDGEW+
Sbjct:   55 TAHKKAIRSVAWR--PHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA--------------LLASSSYDDTVRIWKDYDDDW--ECVAVLNGHEGTV----WSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASV--GADGVLAVYEEVDGEWK 284          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_YARLI (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Yarrowia lipolytica GN=CIA1 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.081e-14
Identity = 65/205 (31.71%), Postives = 92/205 (44.88%), Query Frame = -3
Query:  238 QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEW-IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQW 849
            Q +  L GH    W  A  HP    +LA+CS D TV I+   N+N W +   + E H  SV S+ W P      LA GS D  +S++  + D  W      + H   V  VSW+     G L+ +         CS   D ++ VW+  +   + +C   LQ HT  V+ VAW P+    +   ASAS D  V +W    + D W
Sbjct:    2 QLIKALKGHTDRAW-AASVHPNL-PLLATCSGDKTVRIY---NTNNWELVTTITEGHNRSVRSVAWKPSGSSPSLALGSFDSTVSIW-GKEDDEWQFLAAIEGHENEVKGVSWS---CDGQLLAT---------CSR--DKSIWVWEADDMNDEFECISVLQDHTQDVKHVAWHPS----EMVFASASYDDTVRLW--REDDDDW 180          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_KLULA (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Kluyveromyces lactis GN=CIA1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.412e-14
Identity = 69/252 (27.38%), Postives = 112/252 (44.44%), Query Frame = -3
Query:  127 LAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKD-HVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLY--NGIWKMDCFPAL---QMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYR---VSWSLTGN----ILAVADGNNNVTLWE 843
            LA + GH+  +  VAW+H   G +LA+CS D +V IW+     E  +   V ++H   V  + W  H+    LA  S D  + ++    D  W+   +   H   V S  +  S +              +LCSG  D TV++W L   NG ++ +        + HT  V  V W+P     K  IAS   DG+++I+  + +G  W  + +H+    VY    V W   G+    +L  A  + +V +W+
Sbjct:  102 LAIIEGHENEIKCVAWSHD--GELLATCSRDKSVWIWEADEMGEEFECISVLQEHSQDVKHVIW--HQSLPLLASSSYDDTVRIWKD-CDDDWECCAVLNGHEGTVWSSDFEKSNSN------------VRLCSGSDDGTVRIWCLEDDNGEYEQEWIQESILPKAHTRAVYSVNWSP-----KGYIASTGSDGRLVIYKESEDG--WIVECIHELTHGVYETNMVKWVEYGSKDVILLITAGDDGHVNVWK 329          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_DROVI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila virilis GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.412e-14
Identity = 65/237 (27.43%), Postives = 105/237 (44.30%), Query Frame = -3
Query:  130 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWE-GKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW 834
            L GHKG +W VAW HPK G+  ASC  D  + IW   + N W    +  D HK ++  + W+P   G  LA  S D   ++++       + +   + H   V SVSW+ S   G L+ +         CS   D +V +W++  G  + +C   L  H+  V+ V W P     K  +ASAS D  + ++  +     W+    L    + V+ + +   G  L     +  + +W
Sbjct:   10 LQGHKGRIWGVAW-HPK-GNSFASCGEDKAIRIWSL-SGNTWTTKTILSDGHKRTIREVRWSP--CGEYLASASFDATTAIWSKH-----ECTATLEGHENEVKSVSWSRS---GGLLAT---------CSR--DKSVWIWEV-AGDDEFECAAVLNAHSQDVKRVVWHPT----KEVLASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDATLKIW 217          
The following BLAST results are available for this feature:
BLAST of CX047137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
SEH1_YEAST2.179e-1524.54Nucleoporin SEH1 OS=Saccharomyces cerevisiae GN=SE... [more]
CIO1B_SALSA2.179e-1528.57Probable cytosolic iron-sulfur protein assembly pr... [more]
CFD1_SCHPO2.845e-1527.66Probable cytosolic Fe-S cluster assembly factor C8... [more]
CIAO1_ASHGO3.716e-1530.43Probable cytosolic iron-sulfur protein assembly pr... [more]
CFD1_SCHJY3.716e-1529.51Probable cytosolic Fe-S cluster assembly factor SJ... [more]
CIAO1_YEAST6.339e-1529.69Cytosolic iron-sulfur protein assembly protein 1 O... [more]
CIAO1_YEAS76.339e-1529.69Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_YARLI1.081e-1431.71Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_KLULA1.412e-1427.38Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROVI1.412e-1427.43Probable cytosolic iron-sulfur protein assembly pr... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_12D02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12D02-G3-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047137 ID=CX047137; Name=CX047137; organism=Citrus sinensis; type=EST; length=884bp
TTTTTTTTTTTTTTTTTAAGAGGTTCTAAAATGCAATCTTGTATTTCACG
ATAAAAATTTGAAAAACTTAAAAGAGTCTTACGGCCCAACTGCAGTCACC
TGTCGCCACTCCCCATCCACTGCTTCTTCCCACAGTGTTACATTGTTGTT
TCCATCAGCCACAGCCAATATGTTTCCAGTCAGTGACCAGCTGACTCTAT
AAACAGGGGTCTTGAAGTCATGCAACACCTTACCTTCCCATTGATCTCCT
TCCCTGGCCACAGTCCATATAATAACTTTCCCATCCTCCGATGCACTTGC
AATAGTAGATTTTGGAAGCCCCAAGTTGGGAGCCCAAGCAACATCTCTAA
CCCAATCAGTATGCATTTGAAGAGCTGGAAAGCAGTCCATCTTCCAAATT
CCATTGTACAGCTTCCACACCTTCACGGTATTATCACAACCACCTGAACA
AAGCTTCTGAACTGGGTCAAGAAAACCAGAACCCACAAGTGCACCGGGAG
CTGTTGATGGGGCCCATGAAACTGAAGTCACACCAACCGGATGAGCTTGG
TCAATCCTAGATGTATCCCAGCCGCCATCAGCTCTAGCCGTAAAAACTGA
TATGTTCCCATCTGACGAACCACAAGCCAAACATAGACCGAGCTCATGAG
GCGCCCAATCAATCGAATTGACTGACGATTTGTGGTCCTCAAAAACATGA
TCTTTGATCCACTCATTACTGTTACCCTCCTTCCATATTATGACAGTCCC
GTCAAAAGAACAGGATGCAAGTATAGACCCAAATTTTGGGTGAGCCCAAG
CCACCTCCCAAACAGCACCTTTATGACCACTAAGCTTTGCGAGATGCTGA
GAGGTGTTATTGCCCACACCAATGATCTTAATTG
back to top