CX047137
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: SEH1_YEAST (Nucleoporin SEH1 OS=Saccharomyces cerevisiae GN=SEH1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.179e-15 Identity = 80/326 (24.54%), Postives = 128/326 (39.26%), Query Frame = -3 Query: 88 IKIIGVGNNTSQHLAKLS--GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNE------WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADG---GWD-TSRI------DQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV------------------------------AREGDQWEGKV-------------LHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 882 IK+ + +TS S H ++ + WA P++G I+AS S+D TV +W+E E W K D K S+ S+ +AP LGL LAC +DG + ++ A W TS + H +SW PS P +KL + + + +G K+ L H +R ++WAP++G IA+ +DG++ I+ + R E K D V+ VSW+LTG IL+ A + V LW+ E++ ++ + Sbjct: 33 IKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSR----------FSP-EKLAVSALEQAIIYQRGKDG--KLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSVI 345
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIO1B_SALSA (Probable cytosolic iron-sulfur protein assembly protein ciao1-B OS=Salmo salar GN=ciao1b PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.179e-15 Identity = 78/273 (28.57%), Postives = 121/273 (44.32%), Query Frame = -3 Query: 97 NNTSQHLAKLSGHKGA-VWEVAWAHPKFGSILASCSFDGTVIIW-KEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD------CFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGK-VLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW--------EEAVDGEWRQV 861 N+T L K + H + W VAW +PK G++LASC D T+ IW +EG+S W V +D H+ +V + W+P G LA S D ++ + D ++ + + H V V+WAPS G L+ + C VW IW++D C + HT V+ V W P + +AS S D V ++ E D WE + L + V+ +++ +G LA + V +W +E D W+ V Sbjct: 2 NDTLALLQKFNAHPDSRCWYVAW-NPK-GTLLASCGGDRTIRIWGREGDS--WECKTVLQDGHQRTVRKVAWSP--CGNYLASASFDATTCIWKKKND-DFECLTVLEGHENEVKCVAWAPS---GNLLAT-------------CSRDKSVW-----IWEVDEENEYECVSVVNSHTQDVKHVVWHPT----QELLASCSYDNNVCVY--KEEDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDCTVKIWKECQPEGGQEGTDAAWKCV 240 HSP 2 Score: 68.1662 bits (165), Expect = 7.253e-11 Identity = 62/208 (29.81%), Postives = 86/208 (41.35%), Query Frame = -3 Query: 265 NNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKL---------YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 861 N+ + L L GH+ V VAWA G++LA+CS D +V IW+ NE+ V H V + W P + LA S D N+ V+ D W+ + H TS W + P Q+L S D TVK+WK + WK C H V D+AW P G +A+A D V ++ Sbjct: 92 NDDFECLTVLEGHENEVKCVAWAPS--GNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQ--ELLASCSYDNNVCVY-KEEDDDWECRATLEGH----TSTVWGLTFDPSG----------QRLASCSDDCTVKIWKECQPEGGQEGTDAAWKCVC-TLSGFHGRTVYDIAWCPLTG----ALATACGDDGVRVF 275
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CFD1_SCHPO (Probable cytosolic Fe-S cluster assembly factor C806.02c OS=Schizosaccharomyces pombe GN=SPAC806.02c PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.845e-15 Identity = 78/282 (27.66%), Postives = 114/282 (40.43%), Query Frame = -3 Query: 88 LAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGG----CDNTVKVWKLYNGIWK------MDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKV-LHDFKTPVYRVSWSLTGNILAVADGNNNVTLW------------------EEAVDGEWRQVTAV 843 + +SGH G +W VA AHP + A+ S D +V I+ NSN + HV + H S+ + W P E + LA S D +S+ + D W+ + + H V ++W+ C+G C VW IW+ DC LQ HT V+ V W P L + S S D + W +GD W L V+ +++S GN LA AD + NV LW A+ EW+Q T++ Sbjct: 283 ITTISGHTGRLWSVA-AHPML-PLFATSSQDKSVRIY---NSNTYNLVHVIDGFHTRSIRRVAWRPIERPV-LAVASFDSVVSI-NEKIDDDWECTAALEGHENEVKCIAWS--------------------CNGNYLATCSRDKSVW-----IWEATEDDEFDCLAVLQEHTQDVKVVTWHPTEDL----LVSGSYDNSICFWR--DDGDDWALTCQLQGHTNTVWALAFSPNGNTLASADNDGNVFLWIKISSNEDVATIDSTNILRPALQEEWKQQTSL 526
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_ASHGO (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Ashbya gossypii GN=CIA1 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.716e-15 Identity = 77/253 (30.43%), Postives = 116/253 (45.85%), Query Frame = -3 Query: 127 LAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGN-SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWK-------LYNGIWKMD-CFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYR---VSW-SLTGNILAVADGNNN-VTLWE 843 LA + GH+ V VAW+H G+ LA+CS D +V IW+ S E+ + V ++H V I W H L LA S D + ++ A D W+ + + H V W S A G +LCSG D TV++W+ +++ W + PA +HT V V+W+ + IAS DG + ++ + G +WE D VY V W +L G +L V G++ V +WE Sbjct: 97 LAVIEGHENEVKSVAWSHD--GAYLATCSRDKSVWIWEADELSEEFECNSVLQEHSQDVKHIVW--HASRLLLASSSYDDTVRIW-AEQDDDWECAAVLSGHGGTV----WC-SDFERAETGI-------RLCSGSDDTTVRIWRCLTDDADVFDKEWIQETVLPA--VHTRAVYSVSWSAD-----GLIASVGSDGVLAVYKEVQAG-RWEVVARVDCAHTVYEINVVKWLALDGRVLLVTGGDDGCVNVWE 324 HSP 2 Score: 68.9366 bits (167), Expect = 4.252e-11 Identity = 76/278 (27.34%), Postives = 119/278 (42.81%), Query Frame = -3 Query: 88 IKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW---KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTA-RADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMH--TDWVRDVAWAPNLGLPKSTIASASEDGKVIIW-TVAREGDQWEGKVLHDFKTP------VYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 882 IK++ V N + HK AV VAW ++LA+ SFD TV IW + S E V E H++ V S+ W+ H+ G LA S D ++ ++ A ++ + + Q H V + W S L S D+TV++W + W +C L H T W D A G+ + S S+D V IW + + D ++ + + + P VY VSWS G ++A + + +++E G W V V Sbjct: 36 IKLVDVRNFKLVEELDDTAHKKAVRSVAWR--PHCNVLAAGSFDTTVSIWGRDDDDYSGETELLAVIEGHENEVKSVAWS-HD-GAYLATCSRDKSVWIWEADELSEEFECNSVLQEHSQDVKHIVWHASRL--------------LLASSSYDDTVRIWAEQDDDW--ECAAVLSGHGGTVWCSDFERA-ETGI---RLCSGSDDTTVRIWRCLTDDADVFDKEWIQETVLPAVHTRAVYSVSWSADG-LIASVGSDGVLAVYKEVQAGRWEVVARV 288
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CFD1_SCHJY (Probable cytosolic Fe-S cluster assembly factor SJAG_02895 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=SJAG_02895 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.716e-15 Identity = 72/244 (29.51%), Postives = 113/244 (46.31%), Query Frame = -3 Query: 109 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQW-EGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGE 834 LSGH+G +W VA HP ++A+ S D +V ++ + + E I HV + H SV + W P + + LA S D +S++ + D W+ + H V V+W+ G + + CS D +V +W+ + DC LQ HT V+ VAW P L + S S D + W +GD W + L + V+ +++S G +LA DG V +WE+ V E Sbjct: 289 LSGHRGRIWSVA-VHPTL-PLVATASEDKSVRVF-QAQTGELI--HVIDGYHTRSVRRVAWRPIDRPV-LAIASFDATVSIYE-KIDDDWECVAALEGHENEVKCVAWSHD---GVYLAT---------CSR--DKSVWIWEAMEDD-EFDCLAVLQEHTQDVKVVAWHPKDDL----LVSGSYDNTIRFWR--DDGDDWVQTCELTSHTSTVWALNFSPDGRLLASGDGEGEVFIWEKLVSNE 504
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_YEAST (Cytosolic iron-sulfur protein assembly protein 1 OS=Saccharomyces cerevisiae GN=CIA1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.339e-15 Identity = 76/256 (29.69%), Postives = 111/256 (43.36%), Query Frame = -3 Query: 103 SGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDH----VFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGG-WDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST--IASASEDGKVIIWTVAR--EGDQWEG---KVLHDF-KTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWR 831 + HK A+ VAW S+LA+ SFD TV IW + S + + + E H++ V + W+ G LA S D ++ ++ G ++ + Q H V V W PS A L S D+TV++WK Y+ W +C L H V W+ + + + S S+D V +W E DQ E +L D K VY V+W G I +V G + V E VDGEW+ Sbjct: 55 TAHKKAIRSVAWR--PHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA--------------LLASSSYDDTVRIWKDYDDDW--ECVAVLNGHEGTV----WSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASV--GADGVLAVYEEVDGEWK 284
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_YEAS7 (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Saccharomyces cerevisiae (strain YJM789) GN=CIA1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.339e-15 Identity = 76/256 (29.69%), Postives = 111/256 (43.36%), Query Frame = -3 Query: 103 SGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDH----VFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGG-WDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST--IASASEDGKVIIWTVAR--EGDQWEG---KVLHDF-KTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWR 831 + HK A+ VAW S+LA+ SFD TV IW + S + + + E H++ V + W+ G LA S D ++ ++ G ++ + Q H V V W PS A L S D+TV++WK Y+ W +C L H V W+ + + + S S+D V +W E DQ E +L D K VY V+W G I +V G + V E VDGEW+ Sbjct: 55 TAHKKAIRSVAWR--PHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA--------------LLASSSYDDTVRIWKDYDDDW--ECVAVLNGHEGTV----WSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASV--GADGVLAVYEEVDGEWK 284
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_YARLI (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Yarrowia lipolytica GN=CIA1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.081e-14 Identity = 65/205 (31.71%), Postives = 92/205 (44.88%), Query Frame = -3 Query: 238 QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEW-IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQW 849 Q + L GH W A HP +LA+CS D TV I+ N+N W + + E H SV S+ W P LA GS D +S++ + D W + H V VSW+ G L+ + CS D ++ VW+ + + +C LQ HT V+ VAW P+ + ASAS D V +W + D W Sbjct: 2 QLIKALKGHTDRAW-AASVHPNL-PLLATCSGDKTVRIY---NTNNWELVTTITEGHNRSVRSVAWKPSGSSPSLALGSFDSTVSIW-GKEDDEWQFLAAIEGHENEVKGVSWS---CDGQLLAT---------CSR--DKSIWVWEADDMNDEFECISVLQDHTQDVKHVAWHPS----EMVFASASYDDTVRLW--REDDDDW 180
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_KLULA (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Kluyveromyces lactis GN=CIA1 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.412e-14 Identity = 69/252 (27.38%), Postives = 112/252 (44.44%), Query Frame = -3 Query: 127 LAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKD-HVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLY--NGIWKMDCFPAL---QMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYR---VSWSLTGN----ILAVADGNNNVTLWE 843 LA + GH+ + VAW+H G +LA+CS D +V IW+ E + V ++H V + W H+ LA S D + ++ D W+ + H V S + S + +LCSG D TV++W L NG ++ + + HT V V W+P K IAS DG+++I+ + +G W + +H+ VY V W G+ +L A + +V +W+ Sbjct: 102 LAIIEGHENEIKCVAWSHD--GELLATCSRDKSVWIWEADEMGEEFECISVLQEHSQDVKHVIW--HQSLPLLASSSYDDTVRIWKD-CDDDWECCAVLNGHEGTVWSSDFEKSNSN------------VRLCSGSDDGTVRIWCLEDDNGEYEQEWIQESILPKAHTRAVYSVNWSP-----KGYIASTGSDGRLVIYKESEDG--WIVECIHELTHGVYETNMVKWVEYGSKDVILLITAGDDGHVNVWK 329
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_DROVI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila virilis GN=Ciao1 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.412e-14 Identity = 65/237 (27.43%), Postives = 105/237 (44.30%), Query Frame = -3 Query: 130 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWE-GKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW 834 L GHKG +W VAW HPK G+ ASC D + IW + N W + D HK ++ + W+P G LA S D ++++ + + + H V SVSW+ S G L+ + CS D +V +W++ G + +C L H+ V+ V W P K +ASAS D + ++ + W+ L + V+ + + G L + + +W Sbjct: 10 LQGHKGRIWGVAW-HPK-GNSFASCGEDKAIRIWSL-SGNTWTTKTILSDGHKRTIREVRWSP--CGEYLASASFDATTAIWSKH-----ECTATLEGHENEVKSVSWSRS---GGLLAT---------CSR--DKSVWIWEV-AGDDEFECAAVLNAHSQDVKRVVWHPT----KEVLASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDATLKIW 217 The following BLAST results are available for this feature:
BLAST of CX047137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047137 ID=CX047137; Name=CX047137; organism=Citrus sinensis; type=EST; length=884bpback to top |