CX047137
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 1.174e-77 Identity = 141/264 (53.41%), Postives = 183/264 (69.32%), Query Frame = -3 Query: 106 IKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCDNTVKVWK-LYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEW 882 +KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGGCDN +K+W+ +G WK + L+ H+DWVRDVAWAP++GLP STIAS S+DG+V IWT G+ W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+VDG+W Sbjct: 37 VKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT-WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW 297
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3) HSP 1 Score: 290.041 bits (741), Expect = 1.174e-77 Identity = 141/264 (53.41%), Postives = 183/264 (69.32%), Query Frame = -3 Query: 106 IKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCDNTVKVWK-LYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEW 882 +KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGGCDN +K+W+ +G WK + L+ H+DWVRDVAWAP++GLP STIAS S+DG+V IWT G+ W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+VDG+W Sbjct: 37 VKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT-WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW 297
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 7.607e-77 Identity = 141/264 (53.41%), Postives = 182/264 (68.94%), Query Frame = -3 Query: 106 IKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCDNTVKVWK-LYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEW 882 +KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGGCDN +K+WK +G WK + L+ H+DWVRDVAWAP++GLP STIAS S+DG+V +WT G+ W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+VDG+W Sbjct: 37 VKIFDVRNGGQILVADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT-WEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW 297
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: SEC13_HUMAN (Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3) HSP 1 Score: 286.189 bits (731), Expect = 1.695e-76 Identity = 139/264 (52.65%), Postives = 182/264 (68.94%), Query Frame = -3 Query: 106 IKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCDNTVKVWK-LYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEW 882 +KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIW+E N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + +++ SGGCDN +K+WK +G WK + L+ H+DWVRDVAWAP++GLP STIAS S+DG+V IWT + W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+VDG+W Sbjct: 37 VKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT-WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW 297
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: SEC13_DICDI (Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 5.102e-73 Identity = 135/268 (50.37%), Postives = 174/268 (64.93%), Query Frame = -3 Query: 88 IKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG---FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 882 IKI VG QHL L GH+G VW+VAWAHPKFG ILAS S+D VI+WKE +N W H + H+ SVNSI WAPHE GL LAC SSDG++++ + W+ + Q +GV SVSW+P+ P +LV S P++++ +G CDN +K++K W +D L+ H DWVRDVAWAPN+GLP S IAS S+D VI+WT G W GK L F V+RVSWS+ GNILAV+ G+N VTLW+E VD EW+ ++ V Sbjct: 35 IKIFDVGGENPQHLVDLRGHEGPVWQVAWAHPKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLACASSDGSVTIHNYN-NNVWEAPQKIQVSQIGVNSVSWSPAAIPTSLVNSANTIIPAPIKRIVTGSCDNLIKIFKNVEDKWILD--KQLEDHKDWVRDVAWAPNIGLPYSKIASCSQDRSVIVWTQDENG-VWSGKPLPKFDDIVWRVSWSVIGNILAVSCGDNQVTLWKEGVDSEWKLISHV 298
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: SEC13_USTMA (Protein transport protein SEC13 OS=Ustilago maydis GN=SEC13 PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 9.645e-64 Identity = 133/314 (42.36%), Postives = 177/314 (56.37%), Query Frame = -3 Query: 94 IKIIGVGNNTSQHLAK-LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-----------------------GNSNEW--IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV------------GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVL-------------HDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVT 882 +K+ + N T A+ L GH+G VW+VAWAHP FG ILASCS+DG V+IWK+ ++ W IK+H H +SVNSI WAPHELG LAC SSDGN+SV T DG W + AHPVG +VSWAP+ PG+L+ +G V++ S GCDNTVK+W+ + ALQ H+DWVRDVA+APN+GLP+S +A+AS+D V+IWT W L + F V+RVSWS++GN+LAV+ G+ +TLW+E + G W V+ Sbjct: 50 VKVFDIVNGTPSTTAETLHGHQGPVWQVAWAHPTFGDILASCSYDGKVVIWKDNGAGASIGASAPYGSQSAYGAPTSSAGGWTKIKEHTL--HTASVNSISWAPHELGSILACASSDGNVSVLTFNNDGTWAVDLV-AAHPVGCNAVSWAPAVVPGSLISAQSVGANAGAASNGEAKLVKRFASAGCDNTVKIWEFSQEANRFVEVEALQGHSDWVRDVAFAPNVGLPRSYLATASQDRTVLIWTQDSPTAAWSKTALNPISASAAAGAGSNKFPDTVWRVSWSVSGNVLAVSCGDGKITLWKENLKGAWECVS 360
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: SEC13_CHAGB (Protein transport protein SEC13 OS=Chaetomium globosum GN=SEC13 PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.806e-63 Identity = 132/271 (48.71%), Postives = 172/271 (63.47%), Query Frame = -3 Query: 88 IKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPV---QKLCSGGCDNTVKVWKL--YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 882 IKI + T + L GH GAVW V+WAHPK+G+ILAS +DG V+IW+E N W + + F HK+SVN + W+PHE G LAC SSDGN+SV + + W+ S I AH +GV SVSWAP+T PG++V S ++ +GG DN +K+W G +K++ P L HTDWVRDVAW+P + L KS IASASED V IWT QW KVL F V+RVSWSL+GN+LA + G+N VTLW+E + GEW V ++ Sbjct: 23 IKIFEIEGETQRLTETLKGHDGAVWCVSWAHPKYGNILASAGYDGKVLIWREQN-GAWQRIYDFSLHKASVNVVSWSPHEAGCVLACASSDGNVSVLEFKDNNSWEHS-IFHAHGLGVNSVSWAPATNPGSIVSSKPSPKSTGNRRFVTGGSDNALKIWAFDAATGAYKLEREP-LTGHTDWVRDVAWSPTV-LQKSYIASASEDRTVRIWTSDPANPQQWNCKVL-GFDAAVWRVSWSLSGNVLAASGGDNKVTLWKENLKGEWECVKSI 288
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: SEC13_NEUCR (Protein transport protein sec-13 OS=Neurospora crassa GN=sec-13 PE=3 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 5.292e-62 Identity = 131/272 (48.16%), Postives = 173/272 (63.60%), Query Frame = -3 Query: 88 IKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG---FLDPVQKLCSGGCDNTVKVWKL---YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 882 IKI + + + + L GH GAVW VAWAHPK+G+ILAS +DG V+IW+E + W + F HK+SVN + W+PHE G LAC SSDGN+SV + D W+ I AH +GV SVSWAP+T PG++V S ++ +GG DN +K+W NG +K++ P L HTDWVRDVAW+P + L KS IASAS+D V IWT A +W+ KVL +F V+RVSWSL+GN+LA + NN VTLW+E + GEW V + Sbjct: 38 IKIFEIEGESQRLVETLKGHDGAVWSVAWAHPKYGNILASAGYDGKVLIWRE-QAGSWQRIFDFALHKASVNIVSWSPHEAGCLLACASSDGNVSVLEFK-DNSWE-HNIFHAHGLGVNSVSWAPATTPGSIVSSNPGPGSTGNRRFVTGGSDNLLKIWTFDPATNG-YKLEREP-LAGHTDWVRDVAWSPTV-LQKSYIASASQDKTVRIWTSDAANPGEWKCKVL-NFDAAVWRVSWSLSGNVLAASSDNNKVTLWKENLKGEWENVKTI 302
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: SEC13_ASPNC (Protein transport protein sec13 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sec13 PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.179e-61 Identity = 131/273 (47.99%), Postives = 173/273 (63.37%), Query Frame = -3 Query: 97 IKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN--------EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQ--KLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQV 882 IKI + T + + L GH+GAVW VAWAHPKFG+ILAS S+DG V+IW+E + N W K F H +SVN + WAPHE G LAC SSDG++SV R D W T +I AH +GV S+SWAP+ APG+L+ S P Q + +GG DN +K+W + L+ H+DWVRDVAW+P++ L KS IASAS+D V IWT A QW + L +F T ++RVSWS +GNILAV+ G+N V+LW+E + G+W +V Sbjct: 36 IKIFEIEGETHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQNATSPVAGGAWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAAAPGSLISSN-PGPGQQRRFVTGGSDNLLKIWDYNPETKTYNNTQTLEGHSDWVRDVAWSPSV-LSKSYIASASQDKTVRIWTSDASNPGQWTSQQL-EFDTVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKV 303
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: SEC13_ASPFU (Protein transport protein sec13 OS=Aspergillus fumigatus GN=sec13 PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.540e-61 Identity = 130/273 (47.62%), Postives = 173/273 (63.37%), Query Frame = -3 Query: 97 IKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN--------EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQ--KLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQV 882 IKI + T + + L GH+GAVW VAWAHPKFG+ILAS S+DG V+IW+E + N W K F H +SVN + WAPHE G LAC SSDG++SV R D W T +I AH +GV S+SWAP+ +PG+L+ S P Q + +GG DN +K+W + L+ H+DWVRDVAW+P++ L KS IASAS+D V IWT A QW + L +F T ++RVSWS +GNILAV+ G+N V+LW+E + G+W +V Sbjct: 34 IKIFEIEGETHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQNATSPVAGSTWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAASPGSLISSN-PGPGQQRRFVTGGSDNLLKIWDYNPESKTYNLSQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRIWTSDASNPGQWTSQQL-EFDTVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKV 301 The following BLAST results are available for this feature:
BLAST of CX047137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047137 ID=CX047137; Name=CX047137; organism=Citrus sinensis; type=EST; length=884bpback to top |