CX046729
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: SCL3_ARATH (Scarecrow-like protein 3 OS=Arabidopsis thaliana GN=SCL3 PE=2 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 1.267e-88 Identity = 173/295 (58.64%), Postives = 214/295 (72.54%), Query Frame = 2 Query: 2 NHVXXXXXXXXXXXXDQISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNST--RISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADD---------------------------YASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSNHHG 799 NHV +Q+S LASPDGDTMQRIAAYFTEALA RILKSWPGL+KALN+T R ++VSEE+ VR+LFF+MFP LKV+++LTN+AI+EAMEGEK+VHVIDL+A+EPAQW+AL+QA ++RPEGPPHLRITG+H QKEVL+QMAHRL EEAEKLDIPFQFN VVS+L+ L+ ++LRVKTGEALA+SSVLQLH+ LA+DD + S + + ++N GY + DSFLN++WGLSPKVMVVTEQDS+H+G Sbjct: 63 NHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKALNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWLALLQAFNSRPEGPPHLRITGVHHQKEVLEQMAHRLIEEAEKLDIPFQFNPVVSRLDCLNVEQLRVKTGEALAVSSVLQLHTFLASDDDLMRKNCALRFQNNPSGVDLQRVLMMSHGSAAEARENDMSNNNGY--SPSGDSASSLPLPSSGRTDSFLNAIWGLSPKVMVVTEQDSDHNG 355
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: SCR_ARATH (Protein SCARECROW OS=Arabidopsis thaliana GN=SCR PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.581e-30 Identity = 70/174 (40.23%), Postives = 108/174 (62.07%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVR--KLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAI 565 +ISQL++P G + QR+AAYF+EA++ R+L S G++ AL S + +V ++F + P +K + NQAI EA E E VH+IDL+ + QW L L++RP GPPH+R+TG+ E L RL++ A+KL +PF+F + K+ NLD ++L V+ EA+A+ Sbjct: 315 EISQLSTPYGTSAQRVAAYFSEAMSARLLNSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDSVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSMEALQATGKRLSDFADKLGLPFEFCPLAEKVGNLDTERLNVRKREAVAV 488
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: SCR_PEA (Protein SCARECROW OS=Pisum sativum GN=SCR PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.969e-29 Identity = 67/173 (38.73%), Postives = 110/173 (63.58%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVR-KLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAI 565 +ISQL++P G + QR+AAYF+EA++ R++ S G++ L + + ++++ ++F + PF+K + NQAI EA E E+ VH+IDL+ + QW L L++RP GPP++R+TG+ E L+ RL++ A KL +PF+F V K+ N+D +KL V EA+A+ Sbjct: 472 EISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPVSSHTPHNQKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMETLEATGKRLSDFANKLGLPFEFFPVAEKVGNIDVEKLNVSKSEAVAV 644
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: GAI1_VITVI (DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.614e-29 Identity = 82/255 (32.16%), Postives = 132/255 (51.76%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHP----QKEVLDQMAHRLTEEAEKLDIPFQFNS-VVSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSNHHG 799 QI LA M+++A YF E LA+RI + +P K L+S S +++ F++ P+LK A NQAI+EA EG+K VHVID + + QW AL+QAL+ RP GPP R+TGI P + L ++ +L + AE + + F++ V + L +LD L ++ GE++A++SV +LHSLLA ++ L+++ + P ++ + EQ++NH+G Sbjct: 239 QIGFLAVSQAGAMRKVATYFAEGLARRIYRLYPD--KPLDS------SFSDILQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMKQGMQWPALMQALALRPGGPPSFRLTGIGPPSTDNTDHLHEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRDGESVAVNSVFELHSLLA------------------------------------RPGGIERVLSAVKDMKPDIVTIVEQEANHNG 449
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: SCR_IPONI (Protein SCARECROW OS=Ipomoea nil GN=SCR PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.128e-28 Identity = 85/255 (33.33%), Postives = 130/255 (50.98%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKA--LNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLW---GLSPKVMVVTEQDSNHHG 799 Q+S+L++P G + QR+AAYF+EA++ R++ S G++ + LN+ +S + ++F + PF+K + NQAI EA E E VH+IDL+ + QW L L++RP GPP +R+TG+ E L+ RL++ A+KL +PF+F V K+ NLD +L V EA+A+ + HSL S N+LW L+PKV+ V EQD +H G Sbjct: 442 QVSELSTPYGTSAQRVAAYFSEAMSARLVNSCLGIYASAPLNALPLSLNQKMASAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPLVRLTGLGTSMEALEATGKRLSDFAQKLGLPFEFFPVADKVGNLDPQRLNVNKREAVAVHWL--QHSLYDV---------------------------------------TGSDTNTLWLLQRLAPKVVTVVEQDLSHAG 655
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.128e-27 Identity = 76/254 (29.92%), Postives = 123/254 (48.43%), Query Frame = 2 Query: 47 DQISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEV------LDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSN 790 +++ Q+ S G+ +QR+ AY E L ++ S ++KALN + +E + + +++ P+ K ++ N AI EAM+ E VH+ID + +QW+ LIQA + RP GPP +RITGI L + +RL + A++ ++PF+FNSV + + L V+ GEALA++ LH + D+ S D L + LSPKV+ + EQ+SN Sbjct: 143 EKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHM--PDESVS------------------------------TENHRDRLLRMVKSLSPKVVTLVEQESN 364
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: SCR2_ORYSJ (Protein SCARECROW 2 OS=Oryza sativa subsp. japonica GN=SCR2 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.779e-27 Identity = 69/175 (39.43%), Postives = 104/175 (59.43%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVR---KLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAI 565 +I++LA+P G + QR+AAYF EA++ R++ S GL+ L S + V ++F + PF+K + NQAI EA E E+ VH+IDL+ + QW L L++RP GPP +R+TG+ E L+ RL++ A+ L +PF+F V K NLD +KL V EA+A+ Sbjct: 317 EIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPSPSPAGARVHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGASMEALEATGKRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRREAVAV 491
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: SCR2_ORYSI (Protein SCARECROW 2 OS=Oryza sativa subsp. indica GN=SCR2 PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.779e-27 Identity = 69/175 (39.43%), Postives = 104/175 (59.43%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVR---KLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAI 565 +I++LA+P G + QR+AAYF EA++ R++ S GL+ L S + V ++F + PF+K + NQAI EA E E+ VH+IDL+ + QW L L++RP GPP +R+TG+ E L+ RL++ A+ L +PF+F V K NLD +KL V EA+A+ Sbjct: 317 EIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPSPSPAGARVHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGASMEALEATGKRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRREAVAV 491
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: RGL1_ARATH (DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.629e-27 Identity = 78/251 (31.08%), Postives = 126/251 (50.20%), Query Frame = 2 Query: 53 ISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSV-VSKLENLDFDKLRVKTG-EALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSNHHG 799 + LAS M+++A YF E LA+RI + +P + +SS S+ + + F++ P+LK A NQAI+E + VHVIDL QW ALIQAL+ RP GPP R+TGI + ++ +L + A + + F+F S+ ++ L +L + L ++ G E++A++SV +LH LLA +D FL+++ + P +M V EQ++NH+G Sbjct: 178 VGLLASSQAGAMRKVATYFAEGLARRIYRIYPR-----DDVALSSFSDTLQIH--FYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTDIQEVGWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLA------------------------------------HPGSIDKFLSTIKSIRPDIMTVVEQEANHNG 385
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSJ (Protein SCARECROW 1 OS=Oryza sativa subsp. japonica GN=SCR1 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.191e-27 Identity = 68/175 (38.86%), Postives = 105/175 (60.00%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVR---KLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAI 565 +I++LA+P G + QR+AAYF EA++ R++ S GL+ L + ++ V ++F + PF+K + NQAI EA E E+ VH+IDL+ + QW L L++RP GPP +R+TG+ E L+ RL++ A+ L +PF+F V K NLD +KL V EA+A+ Sbjct: 308 EIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPNPSPAAARLHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGASMEALEATGKRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRREAVAV 482 The following BLAST results are available for this feature:
BLAST of CX046729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046729 ID=CX046729; Name=CX046729; organism=Citrus sinensis; type=EST; length=802bpback to top |