CX046403

Overview
NameCX046403
Unique NameCX046403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAN (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain N315) GN=gnd PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.238e-43
Identity = 88/178 (49.44%), Postives = 122/178 (68.54%), Query Frame = 3
Query:   84 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            +IG+ GLAVMG+NLA NI  +G+ +SV+NR++ K D  VE +K +   P Y     E FV+S++KPR I+++V+AG   D TI +L   ++ GD +IDGGN  Y++T RR KA+A+  + ++GMGVSGGE GA  GPSLMPGG  EAY  + DIL  +AA+  D   CVTY+G  G+G
Sbjct:    4 QIGVIGLAVMGKNLAWNIESRGYSVSVFNRSSEKTDLMVEESKGKNIHPTYSL---EEFVNSLEKPRKILLMVQAGKATDATIDSLLPLLDDGDILIDGGNTNYQDTIRRNKALAQSAINFIGMGVSGGEIGALTGPSLMPGGQEEAYNKVADILDAIAAKAKDGASCVTYIGPNGAG 178          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAC (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain COL) GN=gnd PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.238e-43
Identity = 88/178 (49.44%), Postives = 122/178 (68.54%), Query Frame = 3
Query:   84 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            +IG+ GLAVMG+NLA NI  +G+ +SV+NR++ K D  VE +K +   P Y     E FV+S++KPR I+++V+AG   D TI +L   ++ GD +IDGGN  Y++T RR KA+A+  + ++GMGVSGGE GA  GPSLMPGG  EAY  + DIL  +AA+  D   CVTY+G  G+G
Sbjct:    4 QIGVIGLAVMGKNLAWNIESRGYSVSVFNRSSEKTDLMVEESKGKNIHPTYSL---EEFVNSLEKPRKILLMVQAGKATDATIDSLLPLLDDGDILIDGGNTNYQDTIRRNKALAQSAINFIGMGVSGGEIGALTGPSLMPGGQEEAYNKVADILDAIAAKAKDGASCVTYIGPNGAG 178          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_CUNEL (6-phosphogluconate dehydrogenase, decarboxylating OS=Cunninghamella elegans GN=6-PGD PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.238e-43
Identity = 88/177 (49.72%), Postives = 121/177 (68.36%), Query Frame = 3
Query:   87 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            IGL GLAVMGQNL LN+ + GF +  YNRTTSKVD+ +    +  N+   G H  E     +++PR +++LVKAGS VD  I  L  ++E+GD IIDGGN  + ++ RR K +   G+L++G GVSGGEEGARYGPSLMPGG+ +A++HI+ I   +AA+ PD   C  +VG+ G+G
Sbjct:    8 IGLIGLAVMGQNLILNMNDHGFVVCAYNRTTSKVDDFLANEAKGTNV--VGAHSVEELCAKLKRPRKVMLLVKAGSAVDAFIDQLLPHLEEGDIIIDGGNSHFPDSIRRTKELEAKGILFVGSGVSGGEEGARYGPSLMPGGNSKAWEHIQPIFQAIAAKAPDGASCCEWVGETGAG 182          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_HAEIN (6-phosphogluconate dehydrogenase, decarboxylating OS=Haemophilus influenzae GN=gnd PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.818e-43
Identity = 87/181 (48.07%), Postives = 126/181 (69.61%), Query Frame = 3
Query:   75 VQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            V+  IG+ GLAVMGQNL LN+ + GF +  YNRTTSKVDE ++ A +  N+   G +  E     ++KPR ++++V+AG  VDQ I+ L  ++E+GD IIDGGN  Y +T RR KA+AE G+ ++G GVSGGEEGAR+GPS+MPGG+ EA+++++ I   ++A+     PC  +VG  G+G
Sbjct:    3 VKGDIGVIGLAVMGQNLILNMNDHGFKVVAYNRTTSKVDEFLQGAAKGTNI--IGAYSLEDLAAKLEKPRKVMLMVRAGDVVDQFIEALLPHLEEGDIIIDGGNSNYPDTNRRVKALAEKGIRFIGSGVSGGEEGARHGPSIMPGGNQEAWQYVKPIFQAISAKTEQGEPCCDWVGGEGAG 181          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_CANAL (6-phosphogluconate dehydrogenase, decarboxylating OS=Candida albicans GN=DOR14 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.818e-43
Identity = 89/177 (50.28%), Postives = 125/177 (70.62%), Query Frame = 3
Query:   87 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            IGL GLAVMGQNL LN+A+ G+ +  YNRTT+KVD  +E   +  ++   G H  +  V  +++PR I++LVKAG+PVD+ I  L  Y+E+GD IIDGGN  + ++ RR + +A+ G+L++G GVSGGEEGAR GPSLMPGG+ +A+ HI++I   VAA+  D  PC  +VG  G+G
Sbjct:   31 IGLIGLAVMGQNLILNMADHGYTVVAYNRTTAKVDRFLENEAKGKSI--LGAHSIKELVDQLKRPRRIMLLVKAGAPVDEFINQLLPYLEEGDIIIDGGNSHFPDSNRRYEELAKKGILFVGSGVSGGEEGARTGPSLMPGGNEKAWPHIKEIFQDVAAK-SDGEPCCDWVGDAGAG 204          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAM (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gnd PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.987e-43
Identity = 88/178 (49.44%), Postives = 121/178 (67.98%), Query Frame = 3
Query:   84 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            +IG+ GLAVMG+NLA NI   G+ +SV+NR++ K D  VE +K +   P Y     E FV+S++KPR I+++V+AG   D TI +L   ++ GD +IDGGN  Y++T RR KA+A+  + ++GMGVSGGE GA  GPSLMPGG  EAY  + DIL  +AA+  D   CVTY+G  G+G
Sbjct:    4 QIGVIGLAVMGKNLAWNIESHGYSVSVFNRSSEKTDLMVEESKGKNIHPTYSL---EEFVNSLEKPRKILLMVQAGKATDATIDSLLPLLDDGDILIDGGNTNYQDTIRRNKALAQSAINFIGMGVSGGEIGALTGPSLMPGGQEEAYNKVADILDAIAAKAKDGASCVTYIGPNGAG 178          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD2_YEAST (6-phosphogluconate dehydrogenase, decarboxylating 2 OS=Saccharomyces cerevisiae GN=GND2 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.513e-43
Identity = 89/177 (50.28%), Postives = 121/177 (68.36%), Query Frame = 3
Query:   87 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            +GL GLAVMGQNL LN A+ GF +  YNRT SKVD  +  A +     + G    E  V  ++KPR I++L+KAG+PVD  IK L  +++KGD IIDGGN  + +T RR + + + G+L++G GVSGGE+GAR+GPSLMPGGS EA+ HI++I   +AA+  +  PC  +VG  GSG
Sbjct:    8 LGLVGLAVMGQNLILNAADHGFTVVAYNRTQSKVDRFL--ANEAKGKSIIGATSIEDLVAKLKKPRKIMLLIKAGAPVDTLIKELVPHLDKGDIIIDGGNSHFPDTNRRYEELTKQGILFVGSGVSGGEDGARFGPSLMPGGSAEAWPHIKNIFQSIAAK-SNGEPCCEWVGPAGSG 181          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_STAES (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gnd PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.451e-42
Identity = 88/178 (49.44%), Postives = 117/178 (65.73%), Query Frame = 3
Query:   84 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            +IG+ GLAVMG+NLA NI  +G+ +SVYNR+  K DE V+ +      P Y     E FV S++KPR I+++VKAG   D TI  L   ++  D +IDGGN  Y++T RR KA+AE  + ++GMGVSGGE GA  GPSLMPGG  +AY  + DIL  +AA+  D   CVTY+G  G+G
Sbjct:    4 QIGVVGLAVMGKNLAWNIESRGYSVSVYNRSRQKTDEMVKESPGREIYPTYSL---EEFVESLEKPRKILLMVKAGPATDATIDGLLPLLDDDDILIDGGNTNYQDTIRRNKALAESSINFIGMGVSGGEIGALTGPSLMPGGQKDAYNKVSDILDAIAAKAQDGASCVTYIGPNGAG 178          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_STAEQ (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gnd PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.451e-42
Identity = 88/178 (49.44%), Postives = 117/178 (65.73%), Query Frame = 3
Query:   84 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            +IG+ GLAVMG+NLA NI  +G+ +SVYNR+  K DE V+ +      P Y     E FV S++KPR I+++VKAG   D TI  L   ++  D +IDGGN  Y++T RR KA+AE  + ++GMGVSGGE GA  GPSLMPGG  +AY  + DIL  +AA+  D   CVTY+G  G+G
Sbjct:    4 QIGVVGLAVMGKNLAWNIESRGYSVSVYNRSRQKTDEMVKESPGREIYPTYSL---EEFVESLEKPRKILLMVKAGPATDATIDGLLPLLDDDDILIDGGNTNYQDTIRRNKALAESSINFIGMGVSGGEIGALTGPSLMPGGQKDAYNKVSDILDAIAAKAQDGASCVTYIGPNGAG 178          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_DICDI (6-phosphogluconate dehydrogenase, decarboxylating OS=Dictyostelium discoideum GN=gnd PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.451e-42
Identity = 90/178 (50.56%), Postives = 124/178 (69.66%), Query Frame = 3
Query:   87 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQV-PDSGPCVTYVGKGGSG 617
            IGL GLAVMG+NL LN+  +GF  SVYNRTTSKVDE V+  + +G     G H  E+ V S++ PR ++++VKAG  VD  I+ L   +EKGD IIDGGN  Y +++RR K +   G+L++G GVSGGEEGA  GPS+MPGG+ +A++H++ I   ++A+V P   PC  +VG GG+G
Sbjct:    8 IGLIGLAVMGENLVLNMESRGFTCSVYNRTTSKVDEFVQ-GRGKGK-KFIGCHSLETLVQSLKTPRRVMLMVKAGEVVDHFIQLLLPLLEKGDIIIDGGNSLYTDSDRRTKDLDAKGILFIGTGVSGGEEGALLGPSIMPGGNPKAWEHVKPIFQAISAKVQPGDQPCCDWVGDGGAG 183          
The following BLAST results are available for this feature:
BLAST of CX046403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
6PGD_STAAN2.238e-4349.446-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAAC2.238e-4349.446-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CUNEL2.238e-4349.726-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_HAEIN3.818e-4348.076-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CANAL3.818e-4350.286-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAAM4.987e-4349.446-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD2_YEAST6.513e-4350.286-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAES1.451e-4249.446-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAEQ1.451e-4249.446-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_DICDI1.451e-4250.566-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_7G05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-7G05-M9-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046403 ID=CX046403; Name=CX046403; organism=Citrus sinensis; type=EST; length=617bp
CTCAAATTTCCTAAATTCATTTCATTTTCAAGCATTCTTCGCAAGGTTGA
ATTTTTCTCAGGTGACTAAAGATGGTCCAGACAAGAATTGGCCTAGCTGG
CCTTGCTGTCATGGGTCAAAATCTTGCTCTCAACATTGCTGAGAAAGGAT
TCCCAATTTCTGTTTACAATCGGACCACCTCTAAAGTTGACGAGACTGTT
GAACGAGCCAAACAAGAAGGGAATCTGCCCTTATATGGTTTCCATGATCC
TGAATCCTTTGTTCATTCAATCCAGAAACCTCGTGTTATAATCATGCTTG
TAAAAGCTGGTTCTCCTGTTGATCAAACAATTAAAACATTATCTGTTTAT
ATGGAGAAAGGAGATTGTATCATTGATGGTGGTAATGAATGGTATGAGAA
TACTGAGAGGAGACAGAAAGCCGTGGCTGAATTGGGTCTGCTTTATCTGG
GAATGGGAGTTTCAGGTGGTGAAGAGGGTGCTAGGTATGGGCCTTCTTTA
ATGCCTGGAGGTTCCTTTGAGGCCTACAAGCATATAGAAGATATTCTTCT
TAAGGTGGCTGCTCAGGTTCCTGATAGCGGTCCTTGTGTTACTTATGTTG
GTAAAGGAGGATCTGGA
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