CX046403

Overview
NameCX046403
Unique NameCX046403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_SYNE7 (6-phosphogluconate dehydrogenase, decarboxylating OS=Synechococcus elongatus (strain PCC 7942) GN=gnd PE=1 SV=4)

HSP 1 Score: 186.422 bits (472), Expect = 9.709e-47
Identity = 97/183 (53.01%), Postives = 128/183 (69.95%), Query Frame = 3
Query:   72 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETV-ERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            M   + GL GLAVMG+NLALNI   GF ++VYNRT  K +  + +RA+ +  +P Y   D   FV S+++PR I+++VKAG PVD  ++ L   ++ GD IIDGGN  + +TERR K +  LGL ++GMGVSGGEEGA  GPSLMPGG+  AY+ +E I+  +AAQV D GPCVTY+G GGSG
Sbjct:    1 MALQQFGLIGLAVMGENLALNIERNGFSLTVYNRTAEKTEAFMADRAQGKNIVPAYSLED---FVASLERPRRILVMVKAGGPVDAVVEQLKPLLDPGDLIIDGGNSLFTDTERRVKDLEALGLGFMGMGVSGGEEGALNGPSLMPGGTQAAYEAVEPIVRSIAAQV-DDGPCVTYIGPGGSG 179          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_SYNY3 (6-phosphogluconate dehydrogenase, decarboxylating OS=Synechocystis sp. (strain PCC 6803) GN=gnd PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 4.819e-46
Identity = 94/184 (51.09%), Postives = 129/184 (70.11%), Query Frame = 3
Query:   72 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQV--PDSGPCVTYVGKGGSG 617
            M +   G+ GLAVMG+NLALN+  +GFPI+V+NR+ +K ++ +  A++     +   +  E FV  +++PR I+++VKAG PVD  I  L   +E+GD IIDGGN  YE+TERR K +   GL ++GMGVSGGEEGA  GPSLMPGG+  AYK +E IL K+AAQV  PD+  CVT++G GG+G
Sbjct:    8 MTKRTFGVIGLAVMGENLALNVESRGFPIAVFNRSPNKTEKFM--AERAVGKDIKAAYTVEEFVQLLERPRKILVMVKAGGPVDAVINELKPLLEEGDMIIDGGNSLYEDTERRTKDLEATGLGFVGMGVSGGEEGALLGPSLMPGGTPAAYKELEPILTKIAAQVEDPDNPACVTFIGPGGAG 189          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_SCHPO (6-phosphogluconate dehydrogenase, decarboxylating OS=Schizosaccharomyces pombe GN=SPBC660.16 PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.402e-45
Identity = 94/176 (53.41%), Postives = 124/176 (70.45%), Query Frame = 3
Query:   90 GLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            GL GLAVMGQNL LN A+KGF +  YNRTTS+VDE +  A +     + G H  E FV  ++KPRV I+LVKAG PVD  I+ L+  +EKGD I+DGGN  Y +T RR + +A+ G+L++G GVSGGEEGARYGPSLMPGG+  A+  I+ I   +AA+  ++ PC  +VG+ G+G
Sbjct:   10 GLIGLAVMGQNLILNGADKGFTVCCYNRTTSRVDEFL--ANEAKGKSIVGAHSLEEFVSKLKKPRVCILLVKAGKPVDYLIEGLAPLLEKGDIIVDGGNSHYPDTTRRCEELAKKGILFVGSGVSGGEEGARYGPSLMPGGNPAAWPRIKPIFQTLAAKAGNNEPCCDWVGEQGAG 183          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_CHLPN (6-phosphogluconate dehydrogenase, decarboxylating OS=Chlamydia pneumoniae GN=gnd PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.391e-45
Identity = 89/181 (49.17%), Postives = 131/181 (72.38%), Query Frame = 3
Query:   75 VQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            +QT IGL GLAVMG+NL LN+ + GF +SVYNRT  K  + ++  +   +  L GF   E FV+S+++PR I+++++AG PVDQ+I  L  ++E GD IIDGGN +++++ERR K + E G+L+LG+G+SGGEEGAR+GPS+MPGG+ EA+  +  I   +AA+V    PC ++VG GG+G
Sbjct:    1 MQTNIGLIGLAVMGKNLVLNMIDHGFSVSVYNRTPEKTRDFLK--EYPNHRELVGFESLEDFVNSLERPRKIMLMIQAGKPVDQSIHALLPFLEPGDVIIDGGNSYFKDSERRCKELQEKGILFLGVGISGGEEGARHGPSIMPGGNPEAWPLVAPIFQSIAAKV-QGRPCCSWVGTGGAG 178          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_CHLMU (6-phosphogluconate dehydrogenase, decarboxylating OS=Chlamydia muridarum GN=gnd PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.123e-45
Identity = 92/183 (50.27%), Postives = 131/183 (71.58%), Query Frame = 3
Query:   72 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEG-NLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            M    IGL GLAVMG+NL LN+ + GF +SVYNR+  K +E +   K+ G N+ L GF   E FV S+++PR I++++KAG+PVD+ I +L  ++E+GD +IDGGN +Y ++ERR   + + G+L++GMGVSGGEEGAR GPS+MPGG+ EA+  I  I   +AAQV D  PC +++G GG+G
Sbjct:    1 MAPADIGLIGLAVMGKNLVLNMIDHGFAVSVYNRSPEKTEEFL---KEHGENISLQGFTAIEEFVQSLKRPRKIMIMIKAGAPVDEMISSLLPFLEEGDILIDGGNSYYLDSERRYIDLKKKGILFVGMGVSGGEEGARKGPSIMPGGNIEAWPVIAPIFQSIAAQV-DGQPCCSWIGTGGAG 179          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD2_BACSU (6-phosphogluconate dehydrogenase, decarboxylating 2 OS=Bacillus subtilis GN=yqjI PE=1 SV=4)

HSP 1 Score: 181.415 bits (459), Expect = 3.123e-45
Identity = 90/182 (49.45%), Postives = 133/182 (73.08%), Query Frame = 3
Query:   72 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            M + +IG+ GLAVMG+NLALNI  +GF +SVYNR++SK +E ++ AK +    + G +  E FV S++ PR I+++VKAG+  D TI++L  ++EK D +IDGGN +Y++T+RR K +AE G+ ++G GVSGGEEGA  GPS+MPGG  EA++ ++ IL  ++A+V D  PC TY+G  G+G
Sbjct:    1 MSKQQIGVIGLAVMGKNLALNIESRGFSVSVYNRSSSKTEEFLQEAKGKN---VVGTYSIEEFVQSLETPRKILLMVKAGTATDATIQSLLPHLEKDDILIDGGNTYYKDTQRRNKELAESGIHFIGTGVSGGEEGALKGPSIMPGGQKEAHELVKPILEAISAKV-DGEPCTTYIGPDGAG 178          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_CHLTR (6-phosphogluconate dehydrogenase, decarboxylating OS=Chlamydia trachomatis GN=gnd PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 5.890e-44
Identity = 87/179 (48.60%), Postives = 130/179 (72.63%), Query Frame = 3
Query:   81 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            T IGL GLAVMG+NL LN+ + GF +SVYNR+ +K +E ++   + G   L GF   + FV S+++PR I++++KAG+PVD+ I +L  ++E+GD +IDGGN +Y ++E+R   + + G+L++GMGVSGGEEGAR GPS+MPGG+ +A+  I  I   +AAQV D  PC +++G GG+G
Sbjct:    5 TDIGLIGLAVMGKNLVLNMVDHGFSVSVYNRSPAKTEEFLKDHGESG--ALQGFTTIQEFVQSLKRPRKIMIMIKAGAPVDEMIASLLPFLEEGDILIDGGNSYYLDSEQRYVDLKKEGILFVGMGVSGGEEGARKGPSIMPGGNIDAWPAIAPIFQSIAAQV-DGRPCCSWIGTGGAG 180          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAW (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain MW2) GN=gnd PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.238e-43
Identity = 88/178 (49.44%), Postives = 122/178 (68.54%), Query Frame = 3
Query:   84 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            +IG+ GLAVMG+NLA NI  +G+ +SV+NR++ K D  VE +K +   P Y     E FV+S++KPR I+++V+AG   D TI +L   ++ GD +IDGGN  Y++T RR KA+A+  + ++GMGVSGGE GA  GPSLMPGG  EAY  + DIL  +AA+  D   CVTY+G  G+G
Sbjct:    4 QIGVIGLAVMGKNLAWNIESRGYSVSVFNRSSEKTDLMVEESKGKNIHPTYSL---EEFVNSLEKPRKILLMVQAGKATDATIDSLLPLLDDGDILIDGGNTNYQDTIRRNKALAQSAINFIGMGVSGGEIGALTGPSLMPGGQEEAYNKVADILDAIAAKAKDGASCVTYIGPNGAG 178          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAS (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain MSSA476) GN=gnd PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.238e-43
Identity = 88/178 (49.44%), Postives = 122/178 (68.54%), Query Frame = 3
Query:   84 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            +IG+ GLAVMG+NLA NI  +G+ +SV+NR++ K D  VE +K +   P Y     E FV+S++KPR I+++V+AG   D TI +L   ++ GD +IDGGN  Y++T RR KA+A+  + ++GMGVSGGE GA  GPSLMPGG  EAY  + DIL  +AA+  D   CVTY+G  G+G
Sbjct:    4 QIGVIGLAVMGKNLAWNIESRGYSVSVFNRSSEKTDLMVEESKGKNIHPTYSL---EEFVNSLEKPRKILLMVQAGKATDATIDSLLPLLDDGDILIDGGNTNYQDTIRRNKALAQSAINFIGMGVSGGEIGALTGPSLMPGGQEEAYNKVADILDAIAAKAKDGASCVTYIGPNGAG 178          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAR (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain MRSA252) GN=gnd PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.238e-43
Identity = 88/178 (49.44%), Postives = 122/178 (68.54%), Query Frame = 3
Query:   84 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            +IG+ GLAVMG+NLA NI  +G+ +SV+NR++ K D  VE +K +   P Y     E FV+S++KPR I+++V+AG   D TI +L   ++ GD +IDGGN  Y++T RR KA+A+  + ++GMGVSGGE GA  GPSLMPGG  EAY  + DIL  +AA+  D   CVTY+G  G+G
Sbjct:    4 QIGVIGLAVMGKNLAWNIESRGYSVSVFNRSSEKTDLMVEESKGKNIHPTYSL---EEFVNSLEKPRKILLMVQAGKATDATIDSLLPLLDDGDILIDGGNTNYQDTIRRNKALAQSAINFIGMGVSGGEIGALTGPSLMPGGQEEAYNKVADILDAIAAKAKDGASCVTYIGPNGAG 178          
The following BLAST results are available for this feature:
BLAST of CX046403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
6PGD_SYNE79.709e-4753.016-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SYNY34.819e-4651.096-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SCHPO1.402e-4553.416-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CHLPN2.391e-4549.176-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CHLMU3.123e-4550.276-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD2_BACSU3.123e-4549.456-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CHLTR5.890e-4448.606-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAAW2.238e-4349.446-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAAS2.238e-4349.446-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAAR2.238e-4349.446-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_7G05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-7G05-M9-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046403 ID=CX046403; Name=CX046403; organism=Citrus sinensis; type=EST; length=617bp
CTCAAATTTCCTAAATTCATTTCATTTTCAAGCATTCTTCGCAAGGTTGA
ATTTTTCTCAGGTGACTAAAGATGGTCCAGACAAGAATTGGCCTAGCTGG
CCTTGCTGTCATGGGTCAAAATCTTGCTCTCAACATTGCTGAGAAAGGAT
TCCCAATTTCTGTTTACAATCGGACCACCTCTAAAGTTGACGAGACTGTT
GAACGAGCCAAACAAGAAGGGAATCTGCCCTTATATGGTTTCCATGATCC
TGAATCCTTTGTTCATTCAATCCAGAAACCTCGTGTTATAATCATGCTTG
TAAAAGCTGGTTCTCCTGTTGATCAAACAATTAAAACATTATCTGTTTAT
ATGGAGAAAGGAGATTGTATCATTGATGGTGGTAATGAATGGTATGAGAA
TACTGAGAGGAGACAGAAAGCCGTGGCTGAATTGGGTCTGCTTTATCTGG
GAATGGGAGTTTCAGGTGGTGAAGAGGGTGCTAGGTATGGGCCTTCTTTA
ATGCCTGGAGGTTCCTTTGAGGCCTACAAGCATATAGAAGATATTCTTCT
TAAGGTGGCTGCTCAGGTTCCTGATAGCGGTCCTTGTGTTACTTATGTTG
GTAAAGGAGGATCTGGA
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