CX046403

Overview
NameCX046403
Unique NameCX046403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_SALTY (6-phosphogluconate dehydrogenase, decarboxylating OS=Salmonella typhimurium GN=gnd PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.895e-42
Identity = 84/182 (46.15%), Postives = 123/182 (67.58%), Query Frame = 3
Query:   72 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            M + +IG+ G+AVMG+NLALNI  +G+ +SV+NR+  K +E +     +  +P Y   +   FV S++ PR I+++VKAG+  D  I +L  Y+EKGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  +AY+ +  IL K+AA   D  PCVTY+G  G+G
Sbjct:    1 MSKQQIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLEKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKDAYELVAPILTKIAAVAEDGEPCVTYIGADGAG 179          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_BUCAP (6-phosphogluconate dehydrogenase, decarboxylating OS=Buchnera aphidicola subsp. Schizaphis graminum GN=gnd PE=3 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 1.895e-42
Identity = 81/182 (44.51%), Postives = 128/182 (70.33%), Query Frame = 3
Query:   72 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            M++ ++G+ G+AVMG+NLALNI  K + +S++NRT S  +E +   K++   P +   D   FV+S++KPR I+++VK+G P D+TI+ +  Y+ KGD +IDGGN +Y+++ RR   + + G+ ++GMGVSGGE GA  GPS+MPGGS EAY  +  +L K++A+  +  PCV+Y+G  G+G
Sbjct:    1 MLKQQVGVIGMAVMGRNLALNIESKKYTVSIFNRTQSVTEEVINNNKEKKIFPYFSIKD---FVNSLRKPRCILLMVKSGQPTDETIQFILPYLNKGDILIDGGNTFYKDSIRRSNDLMKCGINFIGMGVSGGELGALNGPSIMPGGSREAYDLVSSMLKKISAKFKNE-PCVSYIGPNGAG 178          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_AGGAC (6-phosphogluconate dehydrogenase, decarboxylating OS=Aggregatibacter actinomycetemcomitans GN=gnd PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.895e-42
Identity = 86/181 (47.51%), Postives = 123/181 (67.96%), Query Frame = 3
Query:   75 VQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            V+  IG+ GLAVMGQNL LN+ + GF +  YNRTTSKVDE +E A +  N+   G +  E   + ++KPR ++++V+AG  VD  I  L  ++E GD IIDGGN  Y +T RR  A+ E G+ ++G GVSGGEEGAR+GPS+MPGG+ EA++ ++ +L  ++A+     PC  +VGK G+G
Sbjct:    3 VKGDIGVIGLAVMGQNLILNMNDHGFKVVAYNRTTSKVDEFLEGAAKGTNI--IGAYSLEDLANKLEKPRKVMLMVRAGEVVDHFIDALLPHLEAGDIIIDGGNSNYPDTNRRVAALREKGIRFIGTGVSGGEEGARHGPSIMPGGNEEAWQFVKPVLQAISAKTEQGEPCCDWVGKDGAG 181          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD9_ECOLX (6-phosphogluconate dehydrogenase, decarboxylating OS=Escherichia coli GN=gnd PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.895e-42
Identity = 84/182 (46.15%), Postives = 123/182 (67.58%), Query Frame = 3
Query:   72 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            M + +IG+ G+AVMG+NLALNI  +G+ +SV+NR+  K +E +     +  +P Y   +   FV S++ PR I+++VKAGS  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL ++AA   D  PCVTY+G  G+G
Sbjct:    1 MSKQQIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPYYTVQE---FVESLETPRRILLMVKAGSGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILKQIAAVAEDGEPCVTYIGADGAG 179          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_ECOLI (6-phosphogluconate dehydrogenase, decarboxylating OS=Escherichia coli (strain K12) GN=gnd PE=1 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 2.475e-42
Identity = 83/182 (45.60%), Postives = 123/182 (67.58%), Query Frame = 3
Query:   72 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            M + +IG+ G+AVMG+NLALNI  +G+ +S++NR+  K +E +     +  +P Y   +   FV S++ PR I+++VKAG+  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL K+AA   D  PCVTY+G  G+G
Sbjct:    1 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAG 179          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_SHIFL (6-phosphogluconate dehydrogenase, decarboxylating OS=Shigella flexneri GN=gnd PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.232e-42
Identity = 84/182 (46.15%), Postives = 125/182 (68.68%), Query Frame = 3
Query:   72 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            M + +IG+ G+AVMG+NLALNI  +G+ +S++NR+  K +E +  A+  G   L  ++  + FV S++ PR I+++VKAG+  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL K+AA   D  PCVTY+G  G+G
Sbjct:    1 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVI--AENPGK-KLAPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAG 179          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD1_YEAST (6-phosphogluconate dehydrogenase, decarboxylating 1 OS=Saccharomyces cerevisiae GN=GND1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.232e-42
Identity = 87/176 (49.43%), Postives = 119/176 (67.61%), Query Frame = 3
Query:   90 GLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            GL GLAVMGQNL LN A+ GF +  YNRT SKVD  +  A +     + G    E F+  +++PR +++LVKAG+PVD  I  +   +EKGD IIDGGN  + ++ RR + + + G+L++G GVSGGEEGARYGPSLMPGGS EA+ HI++I   ++A+  D  PC  +VG  G+G
Sbjct:    6 GLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFL--ANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGPSLMPGGSEEAWPHIKNIFQSISAK-SDGEPCCEWVGPAGAG 178          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_KLEPN (6-phosphogluconate dehydrogenase, decarboxylating OS=Klebsiella pneumoniae GN=gnd PE=3 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 4.221e-42
Identity = 83/182 (45.60%), Postives = 123/182 (67.58%), Query Frame = 3
Query:   72 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            M + +IG+ G+AVMG+NLALNI  +G+ +SV+NR+  K +E +     +  +P Y   +   FV S++ PR I+++VKAG+  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL ++AA   D  PCVTY+G  G+G
Sbjct:    1 MSKQQIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENTGKKLVPYYTVQE---FVESLETPRRILLMVKAGAGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILKQIAAVAEDGEPCVTYIGADGAG 179          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_SHEEP (6-phosphogluconate dehydrogenase, decarboxylating OS=Ovis aries GN=PGD PE=1 SV=4)

HSP 1 Score: 170.629 bits (431), Expect = 5.513e-42
Identity = 90/182 (49.45%), Postives = 119/182 (65.38%), Query Frame = 3
Query:   72 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            M Q  I L GLAVMGQNL LN+ + GF +  +NRT SKVD+ +  A +     + G H  E  V  ++KPR II+LVKAG  VD  I+ L   ++ GD IIDGGN  Y +T RR + + + G+L++G GVSGGE+GARYGPSLMPGG+ EA+ HI+ I   +AA+V    PC  +VG  G+G
Sbjct:    1 MAQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFL--ANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGPSLMPGGNKEAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAG 180          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_LACLA (6-phosphogluconate dehydrogenase, decarboxylating OS=Lactococcus lactis subsp. lactis GN=gnd PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.513e-42
Identity = 87/183 (47.54%), Postives = 125/183 (68.31%), Query Frame = 3
Query:   72 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSG-PCVTYVGKGGSG 617
            M Q   G+ G+AVMG+NLALN+  +G+ +++YNRTTSK +E V +  Q+ NL L      E FV S++KPR I+++V+AG+  D TIK+L   ++KGD +IDGGN  + +T RR   +A+ G+ ++G GVSGGE+GA  GPS+MPGG  EAY  +  I  ++AA+ P  G PCV Y+G  G+G
Sbjct:    1 MAQANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEE-VYKEHQDKNLVLT--KTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPLLDKGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGPSMMPGGQKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAG 180          
The following BLAST results are available for this feature:
BLAST of CX046403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
6PGD_SALTY1.895e-4246.156-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_BUCAP1.895e-4244.516-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_AGGAC1.895e-4247.516-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD9_ECOLX1.895e-4246.156-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_ECOLI2.475e-4245.606-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHIFL3.232e-4246.156-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD1_YEAST3.232e-4249.436-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_KLEPN4.221e-4245.606-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHEEP5.513e-4249.456-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_LACLA5.513e-4247.546-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_7G05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-7G05-M9-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046403 ID=CX046403; Name=CX046403; organism=Citrus sinensis; type=EST; length=617bp
CTCAAATTTCCTAAATTCATTTCATTTTCAAGCATTCTTCGCAAGGTTGA
ATTTTTCTCAGGTGACTAAAGATGGTCCAGACAAGAATTGGCCTAGCTGG
CCTTGCTGTCATGGGTCAAAATCTTGCTCTCAACATTGCTGAGAAAGGAT
TCCCAATTTCTGTTTACAATCGGACCACCTCTAAAGTTGACGAGACTGTT
GAACGAGCCAAACAAGAAGGGAATCTGCCCTTATATGGTTTCCATGATCC
TGAATCCTTTGTTCATTCAATCCAGAAACCTCGTGTTATAATCATGCTTG
TAAAAGCTGGTTCTCCTGTTGATCAAACAATTAAAACATTATCTGTTTAT
ATGGAGAAAGGAGATTGTATCATTGATGGTGGTAATGAATGGTATGAGAA
TACTGAGAGGAGACAGAAAGCCGTGGCTGAATTGGGTCTGCTTTATCTGG
GAATGGGAGTTTCAGGTGGTGAAGAGGGTGCTAGGTATGGGCCTTCTTTA
ATGCCTGGAGGTTCCTTTGAGGCCTACAAGCATATAGAAGATATTCTTCT
TAAGGTGGCTGCTCAGGTTCCTGATAGCGGTCCTTGTGTTACTTATGTTG
GTAAAGGAGGATCTGGA
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