CX046403

Overview
NameCX046403
Unique NameCX046403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_CITDI (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Citrobacter diversus GN=gnd PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 8.802e-40
Identity = 80/171 (46.78%), Postives = 115/171 (67.25%), Query Frame = 3
Query:  105 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            AVMG+NLALNI  +G+ +SV+NR+  K +E +     +  +P Y   +   FV S++ PR I+++VKAG+  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL K+AA   D  PCVTY+G  G+G
Sbjct:    1 AVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAG 168          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_SHISO (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella sonnei GN=gnd PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.150e-39
Identity = 79/171 (46.20%), Postives = 115/171 (67.25%), Query Frame = 3
Query:  105 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            AVMG+NLALNI  +G+ +S++NR+  K +E +     +  +P Y   +   FV S++ PR I+++VKAG+  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL K+AA   D  PCVTY+G  G+G
Sbjct:    1 AVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAG 168          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_SHIDY (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella dysenteriae GN=gnd PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.150e-39
Identity = 79/171 (46.20%), Postives = 115/171 (67.25%), Query Frame = 3
Query:  105 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            AVMG+NLALNI  +G+ +S++NR+  K +E +     +  +P Y   +   FV S++ PR I+++VKAG+  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL K+AA   D  PCVTY+G  G+G
Sbjct:    1 AVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAG 168          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_SHIBO (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella boydii GN=gnd PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.150e-39
Identity = 79/171 (46.20%), Postives = 115/171 (67.25%), Query Frame = 3
Query:  105 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            AVMG+NLALNI  +G+ +S++NR+  K +E +     +  +P Y   +   FV S++ PR I+++VKAG+  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL K+AA   D  PCVTY+G  G+G
Sbjct:    1 AVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAG 168          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_ESCVU (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Escherichia vulneris GN=gnd PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.961e-39
Identity = 80/171 (46.78%), Postives = 114/171 (66.67%), Query Frame = 3
Query:  105 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            AVMG+NLALNI  +G+ +SV+NR+  K +E V     +  +P Y   +   FV S++ PR I+++V+AG+  D  I +L  Y++KGD IIDGGN ++ +T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL K+AA   D  PCVTY+G  G+G
Sbjct:    1 AVMGRNLALNIESRGYTVSVFNRSREKTEEVVAENPGKKLVPYYTVQE---FVESLETPRRILLMVQAGAGTDAAINSLKPYLDKGDIIIDGGNTFFHDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAG 168          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_BUCAI (6-phosphogluconate dehydrogenase, decarboxylating OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=gnd PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.561e-39
Identity = 79/182 (43.41%), Postives = 124/182 (68.13%), Query Frame = 3
Query:   72 MVQTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            M + +IG+ G+AVMG+NLALNI  K + +S++NRT S  +E   + K++  +P +   D   F+ S+ KPR I+++V++G   D+TIK +  Y+EK D +ID GN +Y++T RR + +++  + ++GMGVSGGE GA  GPS+MPGG  EAYK +  +L K++A+     PCV+Y+G  G+G
Sbjct:    1 MSRQQIGVVGMAVMGRNLALNIESKNYSVSIFNRTRSVTEEVFNQNKKKNIVPYFSIKD---FIDSLLKPRCILLMVQSGKATDETIKMILPYLEKEDILIDAGNTFYKDTIRRNEKLSKYEINFIGMGVSGGELGALNGPSIMPGGQKEAYKLVLPMLEKISAKFKGE-PCVSYIGPNGAG 178          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_DROSI (6-phosphogluconate dehydrogenase, decarboxylating OS=Drosophila simulans GN=Pgd PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.368e-39
Identity = 88/180 (48.89%), Postives = 114/180 (63.33%), Query Frame = 3
Query:   78 QTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            Q  I L GLAVMGQNL LN+ EKGF +  YNRT +KV E +    +  N+   G    +  V  ++ PR +++LVK GS VD  I+ L   +  GD IIDGGN  Y++T RR   +A+LGLLY+G GVSGGEEGAR+GPSLMPGG   A+  I+ I   + A+  D  PC  +VG GG+G
Sbjct:    4 QADIALIGLAVMGQNLILNMDEKGFVVCAYNRTVAKVKEFLANEAKGTNV--IGADSLKDMVSKLKSPRKVMLLVKGGSAVDDFIQQLVPLLSAGDVIIDGGNSEYQDTSRRCDELAKLGLLYVGSGVSGGEEGARHGPSLMPGGHEAAWPLIQPIFQAICAKA-DGEPCCEWVGDGGAG 180          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_CITFR (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Citrobacter freundii GN=gnd PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.368e-39
Identity = 79/171 (46.20%), Postives = 114/171 (66.67%), Query Frame = 3
Query:  105 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            AVMG+NLALNI  +G+ +S++NR+  K +E V     +  +P Y   +   FV S++ PR I+++VKAG+  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL K+AA   D  PCV Y+G  G+G
Sbjct:    1 AVMGRNLALNIESRGYTVSIFNRSREKTEEVVAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVIYIGADGAG 168          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_KLETE (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Klebsiella terrigena GN=gnd PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.271e-38
Identity = 78/171 (45.61%), Postives = 115/171 (67.25%), Query Frame = 3
Query:  105 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            AVMG+NLALNI  +G+ +SV+NR+  K +E +     +  +P Y   +   FV S++ PR I+++VKAG+  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL ++AA+  D  PCV Y+G  G+G
Sbjct:    1 AVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPHYTVKE---FVESLETPRRILLMVKAGAGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSADGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILEQIAARAEDGEPCVAYIGADGAG 168          
BLAST of CX046403 vs. ExPASy Swiss-Prot
Match: 6PGD_KLEPL (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Klebsiella planticola GN=gnd PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.660e-38
Identity = 78/171 (45.61%), Postives = 114/171 (66.67%), Query Frame = 3
Query:  105 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVHSIQKPRVIIMLVKAGSPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRQKAVAELGLLYLGMGVSGGEEGARYGPSLMPGGSFEAYKHIEDILLKVAAQVPDSGPCVTYVGKGGSG 617
            AVMG+NLALNI  +G+ +SV+NR+  K +E +     +  +P Y   +   FV S++ PR I+++VKAG+  D  I +L  Y+ KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL ++AA+  D  PCV Y+G  G+G
Sbjct:    1 AVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPHYTVKE---FVESLETPRRILLMVKAGAGTDSAIDSLKPYLNKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILEQIAARAEDGEPCVAYIGADGAG 168          
The following BLAST results are available for this feature:
BLAST of CX046403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
6PGD_CITDI8.802e-4046.786-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHISO1.150e-3946.206-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHIDY1.150e-3946.206-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHIBO1.150e-3946.206-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_ESCVU1.961e-3946.786-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_BUCAI2.561e-3943.416-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_DROSI4.368e-3948.896-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CITFR4.368e-3946.206-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_KLETE1.271e-3845.616-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_KLEPL1.660e-3845.616-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_7G05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-7G05-M9-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046403 ID=CX046403; Name=CX046403; organism=Citrus sinensis; type=EST; length=617bp
CTCAAATTTCCTAAATTCATTTCATTTTCAAGCATTCTTCGCAAGGTTGA
ATTTTTCTCAGGTGACTAAAGATGGTCCAGACAAGAATTGGCCTAGCTGG
CCTTGCTGTCATGGGTCAAAATCTTGCTCTCAACATTGCTGAGAAAGGAT
TCCCAATTTCTGTTTACAATCGGACCACCTCTAAAGTTGACGAGACTGTT
GAACGAGCCAAACAAGAAGGGAATCTGCCCTTATATGGTTTCCATGATCC
TGAATCCTTTGTTCATTCAATCCAGAAACCTCGTGTTATAATCATGCTTG
TAAAAGCTGGTTCTCCTGTTGATCAAACAATTAAAACATTATCTGTTTAT
ATGGAGAAAGGAGATTGTATCATTGATGGTGGTAATGAATGGTATGAGAA
TACTGAGAGGAGACAGAAAGCCGTGGCTGAATTGGGTCTGCTTTATCTGG
GAATGGGAGTTTCAGGTGGTGAAGAGGGTGCTAGGTATGGGCCTTCTTTA
ATGCCTGGAGGTTCCTTTGAGGCCTACAAGCATATAGAAGATATTCTTCT
TAAGGTGGCTGCTCAGGTTCCTGATAGCGGTCCTTGTGTTACTTATGTTG
GTAAAGGAGGATCTGGA
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