DN135274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_GEOSL (Threonyl-tRNA synthetase OS=Geobacter sulfurreducens GN=thrS PE=3 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.085e-66 Identity = 121/226 (53.54%), Postives = 161/226 (71.24%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697 ++RSYR+LPLR + G +HR+E +G L GL RVR F QDDAHI C Q+ E++GV+ F++ IFGF YE++LSTRPEK +G WE+A AL AL + G+P++INEGDGAFYGPKIDI + D+L RK+QCAT+Q DF LP+RF+L Y + + + +RPVM+HR ILGS+ER +L+EH+ G +P WLSP QAIV V+ QPYA QV + + G V Sbjct: 345 QLRSYRDLPLRFFELGTVHRHERAGVLHGLLRVRCFTQDDAHILCTPEQLDAEIKGVISFVNDVMGIFGFDYEMELSTRPEKSIGSDEDWERATGALLGALKDSGRPYEINEGDGAFYGPKIDIKLRDSLDRKWQCATIQCDFTLPERFDLTY-VDADGERKRPVMVHRVILGSIERFIGVLIEHFAGNFPLWLSPVQAIVLTVTDNQQPYAAQVFETLRTNGVRV 569
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT2_BACSU (Threonyl-tRNA synthetase 2 OS=Bacillus subtilis GN=thrZ PE=2 SV=2) HSP 1 Score: 251.521 bits (641), Expect = 3.158e-66 Identity = 121/220 (55.00%), Postives = 156/220 (70.91%), Query Frame = 2 Query: 29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688 SYR+LP+R+A+FG +HR+E SGAL G+ RVR F QDDAHIF RE QI+ E++ + ID YR FGF Y ++LSTRPE LGD + WE +E AL L E G ++INEGDGAFYGPKID + DALKR QCAT+QLDFQ+P++F+L Y E K RPV+IHRA+ GS++R F IL+EHY G +P WL+P Q + PVS Y +V+ + +AG Sbjct: 349 SYRDLPIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLIDEVYRTFGFEYSVELSTRPEDSLGDDSLWEASERALARVLEELGLSYEINEGDGAFYGPKIDFHIKDALKRSHQCATIQLDFQMPEKFDLTYINELNEKV-RPVVIHRAVFGSIDRFFGILIEHYGGAFPVWLAPIQVQIIPVSHVHLDYCRKVQAELKQAG 567
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_SYMTH (Threonyl-tRNA synthetase OS=Symbiobacterium thermophilum GN=thrS PE=3 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 4.124e-66 Identity = 121/227 (53.30%), Postives = 162/227 (71.37%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 ++RSYR+LPL++A++G L R EASG L GL RVR F QDDAH+F R QI++++R V+ +D Y G YE+KLSTRPE ++GD+ W +AEAAL AL+ G+ +++N GDGAFYGPK+D V+DAL RK+QCAT+QLDFQLP +F+L Y ED K RPVMIHRAI+G++ER IL EHY G +P W++P QA V P++ YA +V + AG V+ Sbjct: 346 QIRSYRDLPLKIAEYGPLSRFEASGTLHGLLRVRGFHQDDAHLFVRPDQIEEQIREVIGLVDTIYGTLGLEYEIKLSTRPEDFMGDIELWNEAEAALARALDGMGRSYKLNPGDGAFYGPKLDFDVTDALGRKWQCATVQLDFQLPIKFDLTYIGED-GKEHRPVMIHRAIMGTLERFIGILTEHYAGNFPLWMAPVQARVLPITDRHHAYAGEVVAKLQEAGLRVE 571
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTM_SCHPO (Probable threonyl-tRNA synthetase, mitochondrial OS=Schizosaccharomyces pombe GN=SPAC24C9.09 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 2.673e-65 Identity = 128/226 (56.64%), Postives = 155/226 (68.58%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGY--SAEDEAKTER----PVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQ--PYALQVRDHI 676 RSY+ELPLR ADF LHRNEASGAL+GLTR+R F QDD HIFC IKDE++ L F+ Y + G +L LSTRPE+++G L TW +AE L EAL E G+ W INEGDGAFYGPKID+ V+DA + Q AT+QLDF LP RF L Y A D A +E+ PVMIHRAI GS+ER IL+EH G WPFWLSPR A++ PV+ + YA QV+ + Sbjct: 158 RSYKELPLRFADFSPLHRNEASGALSGLTRLRCFHQDDGHIFCSPESIKDEIKNTLTFVKQVYSLLGMNKLKLYLSTRPEEHIGSLDTWNEAENGLREALQESGETWIINEGDGAFYGPKIDVMVADARGKWHQTATIQLDFNLPQRFKLYYRTDAGDNAGSEKLIKQPVMIHRAIFGSLERFMGILIEHLNGHWPFWLSPRHAVILPVNQTDRILTYAKQVQKEL 383
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_NITOC (Threonyl-tRNA synthetase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=thrS PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.560e-65 Identity = 121/225 (53.78%), Postives = 164/225 (72.89%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGY 691 ++RSYRELP+R A+ G ++R+E SGAL GL RVR F QDDAHIFCRE QI++E+ G+L+ FGF YE+ LSTRPEK +G A WE+A AL AL++ G + ++EG GAFYGPKIDI + DA+ RK+QC+T+QLDF LP+RF + Y AED A+ RP+MIHRA+LGS+ER F +L+EHY+GK+P WL+P Q +V ++ + YA QV + + G+ Sbjct: 345 RLRSYRELPIRWAELGTVYRHEMSGALHGLMRVRGFTQDDAHIFCREEQIENEILGILDLTLEMLAAFGFDRYEIDLSTRPEKSVGPEAIWEQATQALRSALDKKGLDYAVDEGGGAFYGPKIDIKIEDAIGRKWQCSTVQLDFNLPERFAMEYVAEDGAR-HRPIMIHRAVLGSLERFFGVLIEHYEGKFPPWLAPVQVVVMSITDRQEGYARQVEEAMRNKGF 568
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_CARHZ (Threonyl-tRNA synthetase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=thrS PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 7.778e-65 Identity = 120/227 (52.86%), Postives = 154/227 (67.84%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 K+ SYRE P+RLA+ G++HR+E SG L GL RVR F QDDAHIF Q+KDE+ GV+ ID YR+FGF Y ++LSTRPE +G WE A +L EAL E G P++INEGDGAFYGPKID + D L R +QC T+QLDFQ+P++F+L Y ED K RPVMIHR + GS+ER IL+EHY G +P WLSP Q V V+ + Y ++ ++ G V+ Sbjct: 343 KLHSYREFPIRLAELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPEQVKDEIIGVINLIDEFYRLFGFEYHVELSTRPENSMGSDELWELATNSLKEALEERGLPYKINEGDGAFYGPKIDFHLKDCLGRTWQCGTIQLDFQMPEKFDLTYIGEDGQK-HRPVMIHRVVFGSIERFIGILIEHYAGAFPVWLSPVQVRVITVAERHREYGQEIYQKLFNQGVRVE 568
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_NAUPA (Threonyl-tRNA synthetase OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=thrS PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.016e-64 Identity = 120/222 (54.05%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRA 685 KVRSY+ELPLRL +FG +HR+E SG L GL RVR F QDDAHIFCR QI++EV VLEF+D FGF YE+++STRPEK +G WEKA +L +ALN + + I+EG GAFYGPKIDI ++DA+ RK+QC T+Q+DF LP+RF++ Y E+ + RPVMIHRAI+GS ER AIL EHY G++P +++P +AI P++ YA +++ + A Sbjct: 320 KVRSYKELPLRLFEFGTVHRHEKSGVLHGLLRVREFTQDDAHIFCRPDQIEEEVIKVLEFVDSIMERFGFNYEMEISTRPEKSIGSDEIWEKATESLKKALNSLNREYGIDEGGGAFYGPKIDIKITDAIGRKWQCGTIQVDFNLPERFDITYVDENNERV-RPVMIHRAIIGSFERFIAILTEHYAGEFPTFIAPIKAIFVPIAESHVEYAKKLQKELLEA 540
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PELCD (Threonyl-tRNA synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=thrS PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.327e-64 Identity = 120/224 (53.57%), Postives = 153/224 (68.30%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697 RSYR+LPLR + G +HR+E SG L GL RVR F QDDAHI C Q+ +E++ VLEF+ IFGF YE+++STRPEK +G A WE+A AL AL + P +NEGDGAFYGPKIDI + DAL R++QCAT+Q DF LP+RF+L Y +D K RPVM+HR ILG++ER +L+EHY G +P WL+P QA+V V+ YA V D + AG V Sbjct: 349 RSYRDLPLRYFELGTVHRHEKSGVLHGLLRVRGFTQDDAHIICTPDQLDEEIKRVLEFVRDVMAIFGFEYEIEISTRPEKSIGSDADWERATGALMNALKDLELPHDVNEGDGAFYGPKIDIKLKDALDRRWQCATIQCDFTLPERFDLTYVGKDGEK-HRPVMLHRVILGAIERFIGVLIEHYAGNFPLWLAPVQAVVINVTDNQADYAKSVSDALRAAGVRV 571
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_FINM2 (Threonyl-tRNA synthetase OS=Finegoldia magna (strain ATCC 29328) GN=thrS PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.327e-64 Identity = 119/226 (52.65%), Postives = 158/226 (69.91%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697 ++ SYRELP+++A+ G +HR+E SGAL GL RVR F QDDAH+FC QI++EV ++F DY Y FGF YE++LSTRPE +G W+ A ++L AL G P++INEGDGAFYGPKID + DA+ R +QC T+QLDFQ+P+RF++ Y A D +K +RP MIHRAILGS ER IL+EHY GK+P WLSP Q + P+S YA +++ + G V Sbjct: 343 ELHSYRELPIKVAELGQVHRHELSGALHGLFRVRTFVQDDAHVFCLPEQIEEEVSKTIDFCDYIYSKFGFKYEVELSTRPEDSMGSDEDWDLAISSLKNALEHKGLPYKINEGDGAFYGPKIDFHLEDAIGRTWQCGTIQLDFQMPERFDMTYIASDGSK-KRPAMIHRAILGSEERFMGILIEHYAGKFPLWLSPVQVEILPISDKFNDYAYELQQKMKARGLRV 567
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PARUW (Threonyl-tRNA synthetase OS=Protochlamydia amoebophila (strain UWE25) GN=thrS PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.733e-64 Identity = 123/225 (54.67%), Postives = 155/225 (68.89%), Query Frame = 2 Query: 29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEK-YLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 SYRELPLR+A+ G +HR E SG+L+GL RVR F QDDAHIF + S I+ E+ GVL D Y FG +Y L+LSTRPEK +G WE A A L AL+E GK ++INEGDGAFYGPKID + DA+ R +QC T+QLD LP++F L Y+ D + +RPVMIHRAI GS+ER F IL+EHY GK+P WLSP Q V+ +PYA ++ AG++VD Sbjct: 350 SYRELPLRIAEIGNVHRYEPSGSLSGLFRVRSFHQDDAHIFMKPSDIQQEILGVLALADEIYSTFGLSYRLELSTRPEKNTIGTDHEWEVATAGLKGALDEMGKEYRINEGDGAFYGPKIDFHIRDAINRSWQCGTIQLDMALPEKFELEYTFSDGTR-QRPVMIHRAIFGSIERFFGILIEHYVGKFPLWLSPSQIRFITVADRHEPYARELAKRFKNAGFHVD 573 The following BLAST results are available for this feature:
BLAST of DN135274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135274 ID=DN135274; Name=DN135274; organism=Citrus sinensis; type=EST; length=701bpback to top |