DN135274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_MYXXD (Threonyl-tRNA synthetase OS=Myxococcus xanthus (strain DK 1622) GN=thrS PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.733e-64 Identity = 120/227 (52.86%), Postives = 161/227 (70.93%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 K SYR+LPLR VLHRNEA+G+L GLTRVR+F QDDAHI+C E+QI DEVR ++ +D+ Y+ G TY +KLSTRPE+ LGD + W++AE L AL G +++ GDGAFYGPKID +VSD++ R++Q T+QLD+ P+RF+L Y ED A+ RPV++HRAI GS ER AIL+EH+ G +P WL+P QA++ V+ YA +VRD + GY V+ Sbjct: 352 KKHSYRDLPLRYHTQDVLHRNEAAGSLGGLTRVRQFAQDDAHIYCTEAQITDEVRRFVKLLDHVYKAVGLTYAVKLSTRPEQRLGDDSLWDRAEGGLKAALESLGLEYELAPGDGAFYGPKIDFAVSDSIGRRWQLGTMQLDYLAPERFDLTYVGEDNAE-HRPVVLHRAIFGSFERFTAILIEHFAGAFPAWLAPIQAVLVTVADRQNDYARKVRDSLRAKGYRVE 577
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_SYNWW (Threonyl-tRNA synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=thrS PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.263e-64 Identity = 119/226 (52.65%), Postives = 157/226 (69.47%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 + SY+ELPLR+ + G++HR+E SG L GL RVR F QDDAHIF QI DE++GV++ +D Y +FGF Y ++LST+PEK +G WE A AL +AL E G +++NEGDGAFYGPKID + D+L R +QC T+QLDFQ+P++F+L Y ED K RPVMIHR I GS+ER IL EH+ G +P WL+P Q V P++ SQ YA QV + +AG V+ Sbjct: 344 LHSYKELPLRMGEMGLVHRHEMSGVLHGLMRVRAFTQDDAHIFMLPEQIIDEIKGVMDLVDRFYSLFGFPYHVELSTKPEKAMGSDEIWEVATNALIKALEERGMEYKVNEGDGAFYGPKIDFHLQDSLDRTWQCGTIQLDFQMPEKFDLTYVGEDGGK-HRPVMIHRVIYGSIERFIGILTEHFGGAFPLWLAPVQVRVLPITQRSQDYARQVVAELEQAGIRVE 568
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC_ENTBH (Probable threonyl-tRNA synthetase, cytoplasmic OS=Enterocytozoon bieneusi (strain H348) GN=EBI_22768 PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.263e-64 Identity = 124/213 (58.22%), Postives = 149/213 (69.95%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQV 664 RSY+ELPLR ADFGVLHRNE SG+LTGLTRVRRFQQDDAHIF +S IK+E+ + F+ Y IF F YEL LSTRP K+LG + W+ AE +L +A+ + G + +NEGDGAFYGPKIDI + D L RK QCAT+QLDFQLP RF+L + E E PV+IHRAILGS ER AIL+E Y PFWL PRQ + + + Y V Sbjct: 339 RSYKELPLRYADFGVLHRNECSGSLTGLTRVRRFQQDDAHIFTSKSSIKEEIENAIGFLKTVYSIFNFKYELFLSTRPTKFLGTIEEWDVAEKSLKDAIIDSGHTYTLNEGDGAFYGPKIDIILHDILNRKIQCATIQLDFQLPQRFDLKFKNE-LGMYETPVIIHRAILGSFERFIAILIESYGKHLPFWLHPRQVGLVTIDCKHENYMYTV 550
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_CLOD6 (Threonyl-tRNA synthetase OS=Clostridium difficile (strain 630) GN=thrS PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.956e-64 Identity = 120/227 (52.86%), Postives = 151/227 (66.52%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 ++ SYR+ P+R+A+ G +HR+E SGAL GL RVR F QDD+HIF QIKDE++GV ID Y+ FGF Y L+LSTRPE +G WE AE L EAL E G P+ INEGDGAFYGPKID + D L R +QC T+QLD QLP +F+ Y +D K RPVMIHR GS+ER IL+EHY GK+P WLSP Q + P+S YA +V+ ++ G V+ Sbjct: 343 QLHSYRDFPMRVAELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDEIKGVANLIDGIYKTFGFEYNLELSTRPENSMGSDEEWEAAENGLREALEELGLPYTINEGDGAFYGPKIDFHLKDCLGRTWQCGTIQLDMQLPRQFDNTYIGQDGEK-HRPVMIHRVAFGSIERFIGILIEHYAGKFPVWLSPTQVKILPISDKFMDYANEVKKELFDKGIRVE 568
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_KOSOT (Threonyl-tRNA synthetase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=thrS PE=3 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 3.860e-64 Identity = 116/227 (51.10%), Postives = 154/227 (67.84%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 + SYR+LPL+L +FG +HR E SG L GL RVR F QDDAHIFC Q+K++++ V+ F+D Y FGF Y L TRPE ++GD+ W+ A AL +A+ G +++NEGDGAFYGPKID V+D++ R++QCAT+QLDF +P+RF L Y D K RPVMIHRAI GS++R F IL+EHY G +P WL+P Q + P+S YA +V D + G VD Sbjct: 347 RAMSYRDLPLKLFEFGKVHRYERSGVLHGLLRVRGFIQDDAHIFCTREQLKEQLKDVIRFVDMIYTPFGFEYRADLCTRPEDFMGDVEIWDLATEALKDAIESIGLEYKVNEGDGAFYGPKIDFHVTDSIGREWQCATIQLDFMMPERFELTYVGPDN-KEYRPVMIHRAIYGSLDRFFGILIEHYAGAFPTWLAPVQVVAIPISDKHVDYAREVADALAAEGVRVD 572
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTM_YEAST (Threonyl-tRNA synthetase, mitochondrial OS=Saccharomyces cerevisiae GN=MST1 PE=1 SV=2) HSP 1 Score: 243.817 bits (621), Expect = 6.585e-64 Identity = 117/215 (54.42%), Postives = 153/215 (71.16%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAY-RIFGFT---------YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVS 634 K RSY ELPLR +DF LHRNEASGAL+GLTR+R+F QDD HIFC SQ+K E+ L+ ID Y +IF F Y + STRP+ ++GDL W AE L E L E GKPW++N GDGAFYGPK+DI V+D L++ Q AT+QLDFQLP+RF+L + +D + +RP+MIHRA GS+ER A+L++ +G+WPFWL+P QA++ PV+ Sbjct: 143 KDRSYNELPLRFSDFSPLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGSGAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWKLNPGDGAFYGPKLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNS-YKRPIMIHRATFGSIERFMALLIDSNEGRWPFWLNPYQAVIIPVN 356
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_THENN (Threonyl-tRNA synthetase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=thrS PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 8.600e-64 Identity = 119/223 (53.36%), Postives = 155/223 (69.51%), Query Frame = 2 Query: 29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697 SYR+LPLR +FG +HR E SG L GL RVR F QDDAHIFC QI+DE+ GVLE I+ Y FGFTY ++LST PE ++GD A WEKA AL +AL+ G P+++NEG+GAFYGPKID + D+L R++QCAT+QLDF +P++FN+ Y D + VMIHRAI GS+ER F IL+EH+ G +P W++P Q V P+S A +V + R G+ V Sbjct: 345 SYRDLPLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFCTPDQIEDEILGVLELINTIYSQFGFTYRVELSTMPEDHMGDEAIWEKATNALKKALDRAGLPYRVNEGEGAFYGPKIDFHIKDSLGREWQCATIQLDFMMPEKFNVTYIGPDN-REHTAVMIHRAIYGSLERFFGILIEHFAGAFPTWIAPVQVAVIPISDKHSEGAKKVATMLSREGFRV 566
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_GEOSM (Threonyl-tRNA synthetase OS=Geobacter sp. (strain M21) GN=thrS PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 8.600e-64 Identity = 117/226 (51.77%), Postives = 157/226 (69.47%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697 ++RSYR+LPLR + G +HR+E +G L GL RVR F QDDAHI C Q+ E++GV++F+ IFGF +E++LSTRPEK +G WE A +AL AL + G+P++INEGDGAFYGPKIDI + DAL R++QCAT+Q DF LP+RF+L Y D K +RPVM+HR ILG++ER +L+EH+ G +P WL+P QA + V+ PYA D + AG V Sbjct: 345 QLRSYRDLPLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCTPDQLDAEIKGVIQFVTEVMGIFGFEFEMELSTRPEKSIGSDDAWELATSALLNALKDSGRPYEINEGDGAFYGPKIDIKLRDALDRRWQCATIQCDFTLPERFDLTYVDADGEK-KRPVMVHRVILGAIERFIGVLIEHFAGNFPTWLAPVQATIVTVTDNQIPYAQAAFDKLRAAGIRV 569
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_HELHP (Threonyl-tRNA synthetase OS=Helicobacter hepaticus GN=thrS PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.467e-63 Identity = 122/226 (53.98%), Postives = 157/226 (69.47%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIY-RAGYYVD 700 RSYRELPLR ++G++HR+E SG L GL RVR F QDDAHIFC SQIK EV +L+F FGF YE++LSTRP+K +G+ WE A AAL AL E +QI+EG GAFYGPKIDI ++DALKRK+QC T+Q+D LP+RF L Y+ E + + PVMIHRAILGS ER AIL EH+ G++P +++P Q I+ P+ YA +RD I ++G Y + Sbjct: 313 RSYRELPLRFYEYGIVHRHERSGVLHGLLRVREFTQDDAHIFCMTSQIKSEVNQILDFTKGIMNAFGFHYEMELSTRPQKSIGNDEVWENATAALKSALEENHISYQIDEGGGAFYGPKIDIKITDALKRKWQCGTIQIDMNLPERFELSYTDEHNVQVQ-PVMIHRAILGSFERFVAILTEHFGGEFPLFIAPTQVILIPIGEAQLEYARILRDKIITQSGAYAE 537
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_GEOBB (Threonyl-tRNA synthetase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=thrS PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.916e-63 Identity = 117/226 (51.77%), Postives = 156/226 (69.03%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697 ++RSYR+LPLR + G +HR+E +G L GL RVR F QDDAHI C Q+ E++GV++F+ IFGF +E++LSTRPEK +G WE A AL AL + G+P++INEGDGAFYGPKIDI + DAL R++QCAT+Q DF LP+RF+L Y D K +RPVM+HR ILG++ER +L+EH+ G +P WL+P QA + V+ PYA D + AG V Sbjct: 345 QLRSYRDLPLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCTPEQLDAEIKGVIQFVTEVMGIFGFEFEMELSTRPEKSIGSDDAWELATNALLNALKDSGRPYEINEGDGAFYGPKIDIKLRDALDRRWQCATIQCDFTLPERFDLTYVDADGEK-KRPVMVHRVILGAIERFIGVLIEHFAGNFPTWLAPVQATIVTVTDNQIPYAQAAFDKLRAAGIRV 569 The following BLAST results are available for this feature:
BLAST of DN135274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135274 ID=DN135274; Name=DN135274; organism=Citrus sinensis; type=EST; length=701bpback to top |