DN135274

Overview
NameDN135274
Unique NameDN135274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_LEPBL (Threonyl-tRNA synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=thrS PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.068e-54
Identity = 104/227 (45.81%), Postives = 149/227 (65.64%), Query Frame = 2
Query:   23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700
            + SYRELPLR A+FG +HR+E  G L GL RVR F QDD+HI+     ++ EV  +++F    Y+ FGF+ ++  ++TRPEK  G    WE A   L ++L + G P+ I EG+GAFYGPKI+ ++ D++ R +QC T+Q+DF +P+RF L Y+  D  K +RPVMIHRAI GS+ER   IL+EHY+GK+P W+SP Q  +  ++     YA  V   +  AG+ V+
Sbjct:  348 LHSYRELPLRFAEFGSVHRHELHGVLHGLFRVRAFTQDDSHIYAPLEHLESEVTDIIDFTFTVYKKFGFSEFKTFIATRPEKSQGRDEDWEFATNTLKQSLEKKGIPYGIKEGEGAFYGPKIEFNIKDSIGRLWQCGTIQVDFSMPERFELDYTDSDGQK-KRPVMIHRAIYGSLERFIGILIEHYEGKFPLWISPNQIRILTITEKVAEYAKDVYCELVDAGFRVE 573          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_LEPBJ (Threonyl-tRNA synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=thrS PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.068e-54
Identity = 104/227 (45.81%), Postives = 149/227 (65.64%), Query Frame = 2
Query:   23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700
            + SYRELPLR A+FG +HR+E  G L GL RVR F QDD+HI+     ++ EV  +++F    Y+ FGF+ ++  ++TRPEK  G    WE A   L ++L + G P+ I EG+GAFYGPKI+ ++ D++ R +QC T+Q+DF +P+RF L Y+  D  K +RPVMIHRAI GS+ER   IL+EHY+GK+P W+SP Q  +  ++     YA  V   +  AG+ V+
Sbjct:  348 LHSYRELPLRFAEFGSVHRHELHGVLHGLFRVRAFTQDDSHIYAPLEHLESEVTDIIDFTFTVYKKFGFSEFKTFIATRPEKSQGRDEDWEFATNTLKQSLEKKGIPYGIKEGEGAFYGPKIEFNIKDSIGRLWQCGTIQVDFSMPERFELDYTDSDGQK-KRPVMIHRAIYGSLERFIGILIEHYEGKFPLWISPNQIRILTITEKVAEYAKDVYCELVDAGFRVE 573          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_EHRRW (Threonyl-tRNA synthetase OS=Ehrlichia ruminantium (strain Welgevonden) GN=thrS PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.068e-54
Identity = 103/217 (47.47%), Postives = 141/217 (64.98%), Query Frame = 2
Query:   20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYEL-KLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVR 667
            K+RSY++LPLR+A+FG  HR E+SGAL GL RVR F QDDAHIFC E QI +E       +   Y +FGF   L K S RPEK  G    W+KAE AL  ++      + +N GDGAFYGPK++ ++ DA+ R++QC TLQ+DF LP+R    Y+  D  K   P+M+HRAILG++ER   IL+EH+ GK P WL+P Q  +  ++  +  YA+ ++
Sbjct:  343 KIRSYKDLPLRMAEFGTCHRYESSGALHGLMRVRSFTQDDAHIFCTEDQIIEEALKFCNLLMEVYEVFGFKDILVKFSDRPEKRAGSDKIWDKAEEALKASVKAANLNYVLNPGDGAFYGPKLEFTLKDAIGREWQCGTLQMDFVLPERLGAYYTGSD-GKKHHPIMLHRAILGTIERFIGILIEHHSGKLPIWLAPVQLSILTITEDAIDYAISLK 558          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_XANAC (Threonyl-tRNA synthetase OS=Xanthomonas axonopodis pv. citri GN=thrS PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.054e-53
Identity = 107/226 (47.35%), Postives = 142/226 (62.83%), Query Frame = 2
Query:   23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697
            + SYR+LP+R  +FG  HRNE SGAL G+ RVR F QDD H+FC E QI+ EV    +     Y  FGF   ++K++ RPEK LGD ATW+KAEAAL  AL   G  WQ   G+GAFYGPKI+  + DA+ R +Q  T+Q+DF +P R    Y  E+  K + PVM+HRAI+GS+ER   IL+EH+ G +P WL+P Q +V  ++     Y   VR  +   G+ V
Sbjct:  345 LHSYRDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLEPQIESEVTAFHQQALAVYTAFGFDDIQIKIALRPEKRLGDDATWDKAEAALRSALGVCGVEWQELPGEGAFYGPKIEYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQK-KHPVMLHRAIVGSMERFIGILIEHHAGAFPSWLAPVQVVVANITDAQAEYVDSVRKTLANQGFRV 569          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_THICR (Threonyl-tRNA synthetase OS=Thiomicrospira crunogena (strain XCL-2) GN=thrS PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.054e-53
Identity = 104/227 (45.81%), Postives = 145/227 (63.88%), Query Frame = 2
Query:   29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGF-TYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQL--PDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700
            SYR+LP+RLA+FG++HRNE SG L GL RVR F QDDAHIFC   QIK+EV+  ++ +   Y  FGF   ++K STRPE+ +G+   W+ AE AL + L +    + +  G+GAFYGPKI+  + D + R +QC T+QLDF +   +R N  Y   D  K   PVMIHRAILGS+ER   IL+EHY+GK+P WL+P Q ++  ++     Y       + + G+ V+
Sbjct:  346 SYRDLPIRLAEFGLVHRNEPSGTLHGLMRVRSFTQDDAHIFCTPEQIKEEVQACIDLVFNTYADFGFDNIQVKFSTRPEQRVGEDDVWDLAEEALEQTLKDANLEYALQPGEGAFYGPKIEFQLKDCIGRVWQCGTIQLDFSMTQEERLNAVYIGADNEK-HHPVMIHRAILGSLERFVGILVEHYEGKFPTWLAPTQLVIASIADVHNEYVNDFAKKLKKHGFRVE 571          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_SPHAL (Threonyl-tRNA synthetase OS=Sphingopyxis alaskensis GN=thrS PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.054e-53
Identity = 109/227 (48.02%), Postives = 142/227 (62.56%), Query Frame = 2
Query:   23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKP-----WQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688
            ++SYR+LPLRL + G  HRNE  GAL GL RVR+F QDDAHIFCRE QI +EVR      D  Y+ FGFTY +KL+ RPEK  G  A W+K+E  L  A+ E G       W+   G+GAFY PK++  ++DA+ R +Q  T+Q D  LPDR +  Y  ED  +  RPVM+HRAI GS ER   IL+EH+ G++P WL+P QA+V  +   +  YA      +  AG
Sbjct:  368 MKSYRDLPLRLYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVEEVRNFCALADRIYKDFGFTYAIKLALRPEKRFGSDAMWDKSEDELRNAVIEAGLATEQYGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPDRLDASYIGED-GERHRPVMLHRAIFGSYERFIGILIEHFVGRFPTWLAPVQAVVATIVSDADDYAKAATARLVAAG 593          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PHOLL (Threonyl-tRNA synthetase OS=Photorhabdus luminescens subsp. laumondii GN=thrS PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.054e-53
Identity = 107/223 (47.98%), Postives = 143/223 (64.13%), Query Frame = 2
Query:   23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688
            ++SYR+LPLR+A+FG  HRNE SGAL GL RVR F QDDAHIFC E QI  EV   ++ +   Y  FGF    +KLSTRPEK +G    W +AE +L  AL E G  ++   G+GAFYGPKI+ ++ D L R +QC T+QLDF LP R +  Y  E+  + + PVMIHRA+LGS+ER   IL E Y G +P W++P+Q +V  ++     Y  ++   +  AG
Sbjct:  345 LKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIHREVSSCIKMVYDVYSTFGFEKIVVKLSTRPEKRIGTEEQWNQAEESLAAALQENGVQFEYQPGEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYVGENNER-KVPVMIHRAVLGSLERFIGILTEEYAGFFPTWIAPQQVVVMNITDSQADYVQELVKKLQDAG 566          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_ACIAD (Threonyl-tRNA synthetase OS=Acinetobacter sp. (strain ADP1) GN=thrS PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.054e-53
Identity = 108/214 (50.47%), Postives = 143/214 (66.82%), Query Frame = 2
Query:   23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQ 661
            ++SYR+LP+RLA+FG  HRNE SG+L G+ RVR F QDD HIFC + QI  EV   ++     Y+ FGF   ++KLSTRPEK +GD   W+ AE +L +AL+  G  W++  G+GAFYGPKI+ S+ D L R +QC T+Q DF LP R +  +  ED  + ++PVM+HRAILGS ER   IL+EHY G  P WL+P QA V  ++  SQ  A Q
Sbjct:  344 LKSYRDLPVRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDGHIFCTKEQIGKEVADFIQLTLDVYKDFGFEDVQMKLSTRPEKRVGDDRLWDLAEKSLADALDAAGLEWELQPGEGAFYGPKIEFSLKDCLGRVWQCGTIQCDFNLPIRLDASFVTEDNER-DQPVMLHRAILGSFERFIGILIEHYAGFMPPWLAPVQACVMNIT-DSQAEACQ 555          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_SILST (Threonyl-tRNA synthetase OS=Silicibacter sp. (strain TM1040) GN=thrS PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.376e-53
Identity = 104/223 (46.64%), Postives = 144/223 (64.57%), Query Frame = 2
Query:   23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGF-TYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688
            ++SYR+LPLR+A+FG   R E SGAL G+ RVR F QDD HIFC E QI  E    + F+   Y   GF  + +KLSTRPE+ +G   TW+  E AL +A    G  ++I EG+GAFYGPK++ +++DA+ R +QC TLQ+D  LP+R    +  +D +K  RPVM+HRA LGS ER   IL+E + GK PFWL+PRQ +V  ++  +  Y  +V + +  AG
Sbjct:  355 LKSYRDLPLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCTEDQITSETAKFIAFLSKVYADLGFDNWTIKLSTRPEQRIGSDETWDNMEQALGDACKAAGYDYEILEGEGAFYGPKLEFTLTDAIGRNWQCGTLQVDANLPERLEASFIGQDGSK-HRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASITSEADDYVNEVVETLRAAG 576          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_STRGG (Threonyl-tRNA synthetase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=thrS PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.797e-53
Identity = 109/227 (48.02%), Postives = 147/227 (64.76%), Query Frame = 2
Query:   26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTR-PEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700
            RSYRELPLRL +FG ++R E SG + GLTR R F QDDAHI+C + Q+ +E+   L F+    R +G T + L+LST+ PEKY+G   TWE+A   L +   + G P   + G  AFYGPKI +   DA+ R +Q +T+QLDF LP+RF+L Y+  D +K +RPVMIHRA+ GS+ER FA+LLEHY G +P WL+P QA+  P+     PY  +      + G  VD
Sbjct:  365 RSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATETLRQVAEKQGLPLVPDPGGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGSK-QRPVMIHRALFGSIERFFAVLLEHYAGAFPVWLAPVQAVGIPIGDAHIPYLQEFAAKARKQGLRVD 590          
The following BLAST results are available for this feature:
BLAST of DN135274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SYT_LEPBL8.068e-5445.81Threonyl-tRNA synthetase OS=Leptospira borgpeterse... [more]
SYT_LEPBJ8.068e-5445.81Threonyl-tRNA synthetase OS=Leptospira borgpeterse... [more]
SYT_EHRRW8.068e-5447.47Threonyl-tRNA synthetase OS=Ehrlichia ruminantium ... [more]
SYT_XANAC1.054e-5347.35Threonyl-tRNA synthetase OS=Xanthomonas axonopodis... [more]
SYT_THICR1.054e-5345.81Threonyl-tRNA synthetase OS=Thiomicrospira crunoge... [more]
SYT_SPHAL1.054e-5348.02Threonyl-tRNA synthetase OS=Sphingopyxis alaskensi... [more]
SYT_PHOLL1.054e-5347.98Threonyl-tRNA synthetase OS=Photorhabdus luminesce... [more]
SYT_ACIAD1.054e-5350.47Threonyl-tRNA synthetase OS=Acinetobacter sp. (str... [more]
SYT_SILST1.376e-5346.64Threonyl-tRNA synthetase OS=Silicibacter sp. (stra... [more]
SYT_STRGG1.797e-5348.02Threonyl-tRNA synthetase OS=Streptomyces griseus s... [more]

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Properties
Property NameValue
Genbank descriptionwca08h07 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08h07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135274 ID=DN135274; Name=DN135274; organism=Citrus sinensis; type=EST; length=701bp
TACGGCCGGGGTTTGNNNTAAGGTTCGTTCATACAGAGAACTACCTCTGC
GACTGGCTGATTTTGGGGTCTTGCATCGGAATGAAGCCAGTGGAGCACTC
ACTGGATTAACTCGTGTCAGGAGATTTCAGCAGGATGACGCTCATATTTT
CTGCAGGGAGTCCCAGATAAAAGACGAAGTAAGGGGTGTCCTAGAGTTCA
TTGATTATGCCTACAGAATATTCGGGTTCACATATGAGCTGAAGCTATCA
ACTAGGCCTGAAAAGTATCTTGGGGACTTGGCAACTTGGGAGAAAGCCGA
AGCTGCTCTTACAGAAGCATTGAATGAGTTTGGGAAGCCATGGCAGATAA
ATGAAGGGGATGGAGCATTTTATGGACCAAAGATTGATATCAGTGTATCT
GATGCATTGAAGAGGAAATTCCAGTGTGCTACTTTGCAGCTTGACTTTCA
GCTTCCTGATCGTTTCAACTTGGGTTACTCAGCGGAAGATGAAGCCAAGA
CAGAGAGACCTGTTATGATACACAGAGCGATATTGGGGTCTGTTGAACGT
ATGTTTGCTATACTGTTGGAACATTACAAGGGGAAGTGGCCTTTTTGGCT
CAGTCCACGTCAAGCAATTGTTTGCCCTGTGTCNNNGNAATCCCAACCAT
ATGCTTTACAGGTGCGGGATCATATTTATCGAGCCGGTTATTATGTTGAT
G
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