DN135274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_RHIEC (Threonyl-tRNA synthetase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=thrS PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 8.920e-53 Identity = 110/233 (47.21%), Postives = 150/233 (64.38%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGF-TYELKLSTRPEKYLGDLATWEKAEAALT------EALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 ++SYRELP+RLA+FG++HR E SGAL GL RVR F QDDAHIFC + Q+ E + + I Y FGF +KLSTRPEK +G A W++AEA +T EA +E I G+GAFYGPK + ++ DA+ R++QC T Q+DF LP+RF Y + KT+ PVMIHRAI GS+ER IL+E++ G P W+SP Q +V ++ + Y L+V + + AG V+ Sbjct: 358 LKSYRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTIEAQSEGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQ-PVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALREAGLNVE 589
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_WOLWR (Threonyl-tRNA synthetase OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=thrS PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.165e-52 Identity = 102/225 (45.33%), Postives = 142/225 (63.11%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697 RSYR+LP+R+A+FG HRNE+SG+L GL RVR F QDDAHIFC E Q+ E + + Y GF +K S RP+ GD W++AE AL EA+ E G ++++ G+GAFYGPK++ + DA+ R +QC TLQ+DF LP+R Y D K PVM+HRAILG+ ER IL+E+Y GK+P WL+P Q + ++ + YA ++ + + G V Sbjct: 344 RSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGFNEISVKFSDRPDVRAGDDEVWDRAEKALLEAVKEAGLSYELSPGEGAFYGPKLEFVLKDAIGRSWQCGTLQVDFILPERLGAFYIGADGHK-HHPVMLHRAILGTFERFIGILIENYAGKFPVWLAPTQLAILTITNEADGYATKISNVLKEQGVRV 567
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_STRMK (Threonyl-tRNA synthetase OS=Stenotrophomonas maltophilia (strain K279a) GN=thrS PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.165e-52 Identity = 104/226 (46.02%), Postives = 142/226 (62.83%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697 + SYR+LP+R +FG HRNE SGAL G+ RVR F QDD H+FC E+QI+ EV + Y+ FGF ++K++ RPE LGD ATW+KAE AL AL G WQ G+GAFYGPKI+ + DA+ R +Q T+Q+DF +P R Y E+ K + PVM+HRAI+GS+ER IL+EH+ G++P WL+P Q +V ++ Y V + G+ V Sbjct: 345 LHSYRDLPIRYGEFGSCHRNEPSGALHGILRVRGFTQDDGHVFCTENQIESEVTAFHQQALAVYQHFGFDEIQIKIALRPESRLGDDATWDKAEGALRSALTACGVEWQELPGEGAFYGPKIEYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQK-KHPVMLHRAIVGSMERFLGILIEHHAGQFPAWLAPTQVVVANITDAQADYVSGVTKTLAEQGFRV 569
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_RHIME (Threonyl-tRNA synthetase OS=Rhizobium meliloti GN=thrS PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.165e-52 Identity = 108/233 (46.35%), Postives = 148/233 (63.52%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGF-TYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQ------INEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 ++SYRELP+RLA+FG +HR E SGAL GL RVR F QDDAHIFC + Q+ E + + I Y FGF +KLSTRPEK +G W++AEA +TE L + + I G+GAFYGPK + ++ DA+ R++QC T Q+DF LP+RF Y + E++ +PVMIHRAI GS+ER ILLE+Y G P W+SP Q +V ++ + Y +V + + AG V+ Sbjct: 353 LKSYRELPVRLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGFKEIVVKLSTRPEKRVGSDELWDRAEAVMTEVLQTIEEQSEGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFY-IDSESEKRQPVMIHRAICGSMERFLGILLENYAGHMPLWISPLQVVVATITSEADDYGREVAERLRDAGLTVE 584
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_RHILW (Threonyl-tRNA synthetase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=thrS PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.165e-52 Identity = 110/233 (47.21%), Postives = 150/233 (64.38%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGF-TYELKLSTRPEKYLGDLATWEKAEAALT------EALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 ++SYRELP+RLA+FG++HR E SGAL GL RVR F QDDAHIFC + Q+ E + + I Y FGF +KLSTRPEK +G A W++AEA +T EA +E I G+GAFYGPK + ++ DA+ R++QC T Q+DF LP+RF Y + KT+ PVMIHRAI GS+ER IL+E++ G P W+SP Q +V ++ + Y L+V + + AG V+ Sbjct: 358 LKSYRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTIEAQSEGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQ-PVMIHRAICGSMERFLGILIENFAGHLPLWVSPLQVVVATITSEADAYGLEVAEALREAGLNVE 589
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_MARMS (Threonyl-tRNA synthetase OS=Marinomonas sp. (strain MWYL1) GN=thrS PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.165e-52 Identity = 101/224 (45.09%), Postives = 144/224 (64.29%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGF-TYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGY 691 ++SYR+LP R+A+FG HRNE SGAL G+ RVR F QDD HIF E QI+ EV ++ + Y FGF +LSTRPE+ +G W+KAE AL+EAL+ G W+ G+GAFYGPKI+ S+ DA+ R +QC T+Q+DF +P R Y +ED ++ + PVM+HRAI+GS+ER IL+E +G +P WL+P Q ++ ++ Y + + G+ Sbjct: 345 LKSYRDLPFRMAEFGSCHRNEPSGALHGIMRVRNFVQDDGHIFVTEGQIQQEVSEFIDLLHEVYADFGFDNIVYRLSTRPEQRVGSDEVWDKAEKALSEALDSAGLDWEELPGEGAFYGPKIEFSLKDAIGRVWQCGTIQVDFSMPTRLGAQYVSEDGSR-QTPVMLHRAIVGSLERFIGILIEDTEGAFPVWLAPEQVVIMNITDRQADYCSVLEKRLNSNGF 567
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_WOLPM (Threonyl-tRNA synthetase OS=Wolbachia pipientis wMel GN=thrS PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.522e-52 Identity = 102/225 (45.33%), Postives = 142/225 (63.11%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697 RSYR+LP+R+A+FG HRNE+SG+L GL RVR F QDDAHIFC E Q+ E + + Y GF +K S RP+ G+ W++AE AL EA+ E G +++N G+GAFYGPK++ + DA+ R +QC TLQ+DF LP+R Y D K PVM+HRAILG+ ER IL+E+Y GK+P WL+P Q + ++ + YA ++ + + G V Sbjct: 344 RSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGFNEISVKFSDRPDIRAGNDEVWDRAEKALLEAVKEAGLSYKLNPGEGAFYGPKLEFVLKDAIGRNWQCGTLQVDFILPERLGAFYIGADGHK-HHPVMLHRAILGTFERFIGILIENYAGKFPVWLAPTQLAILTITNEADGYATEISNILKEQGVRV 567
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_STRM5 (Threonyl-tRNA synthetase OS=Stenotrophomonas maltophilia (strain R551-3) GN=thrS PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.522e-52 Identity = 103/226 (45.58%), Postives = 143/226 (63.27%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697 + SYR+LP+R +FG HRNE SGAL G+ RVR F QDD H+FC E+Q++ EV + Y+ FGF ++K++ RPE LGD ATW+KAE AL AL+ G WQ G+GAFYGPKI+ + DA+ R +Q T+Q+DF +P R Y E+ K + PVM+HRAI+GS+ER IL+EH+ G++P WL+P Q +V ++ Y V + G+ V Sbjct: 345 LHSYRDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCTENQVEAEVTAFHQQALAVYQHFGFDEIQVKIALRPESRLGDDATWDKAEGALRSALSSNGVEWQELPGEGAFYGPKIEYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQK-KHPVMLHRAIVGSMERFLGILIEHHAGQFPAWLAPTQVVVANITDAQAEYVSDVTKTLADQGFRV 569
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_RHISN (Threonyl-tRNA synthetase OS=Rhizobium sp. (strain NGR234) GN=thrS PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.522e-52 Identity = 108/233 (46.35%), Postives = 147/233 (63.09%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGF-TYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQ------INEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 ++SYRELP+R+A+FG +HR E SGAL GL RVR F QDDAHIFC + Q+ E + + I Y FGF +KLSTRP+K +G A W++AEA +T+ LN + I G+GAFYGPK + ++ DA+ R++QC T Q+DF LP+RF Y +D K +PVMIHRAI GS+ER ILLE+Y G P W+SP Q +V ++ + Y +V + AG V+ Sbjct: 352 LKSYRELPVRMAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGFKEIVVKLSTRPDKRVGSDALWDRAEAVMTDVLNTIEAQSEGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEK-RQPVMIHRAICGSMERFLGILLENYAGHMPLWISPLQVVVATITSDADDYGREVAARLREAGLTVE 583
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_RHIE6 (Threonyl-tRNA synthetase OS=Rhizobium etli (strain CIAT 652) GN=thrS PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.522e-52 Identity = 110/233 (47.21%), Postives = 150/233 (64.38%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGF-TYELKLSTRPEKYLGDLATWEKAEAALT------EALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 ++SYRELP+RLA+FG++HR E SGAL GL RVR F QDDAHIFC + Q+ E + + I Y FGF +KLSTRPEK +G A W++AEA +T EA +E I G+GAFYGPK + ++ DA+ R++QC T Q+DF LP+RF Y + KT+ PVMIHRAI GS+ER IL+E++ G P W+SP Q +V ++ + Y L+V + + AG V+ Sbjct: 358 LKSYRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTIEAQSEGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQ-PVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALRDAGLNVE 589 The following BLAST results are available for this feature:
BLAST of DN135274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135274 ID=DN135274; Name=DN135274; organism=Citrus sinensis; type=EST; length=701bpback to top |