DN135274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_GEOKA (Threonyl-tRNA synthetase OS=Geobacillus kaustophilus GN=thrS PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.429e-50 Identity = 110/233 (47.21%), Postives = 145/233 (62.23%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGF-TYELKLSTR----PEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQ-PYALQVRDHIYRAGYYVD 700 K+ SYRELP+R+A+ G +HR E SGALTGL RVR +DAHIF R QIKDE + V+ I Y+ FG Y +LS R EKY D WEKA+ L EA++E G + EG+ AFYGPK+D+ V AL + +T+QLDF LP+RF+L Y ED K RPV+IHR ++ ++ER A L+E YKG +P WL+P Q V PVS + YA V+ + G+ V+ Sbjct: 348 KLHSYRELPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKDFGIEEYSFRLSYRDPHDKEKYYDDDEMWEKAQRMLREAMDELGLDYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYIGED-GKPHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTWLAPVQVKVIPVSPEAHLDYAYDVQRTLKERGFRVE 579
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_FRASN (Threonyl-tRNA synthetase OS=Frankia sp. (strain EAN1pec) GN=thrS PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.429e-50 Identity = 106/227 (46.70%), Postives = 144/227 (63.44%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGF-TYELKLSTRPE-KYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 RSYRELPLRL +FG ++R E SG + GLTRVR QDDAH+FC Q+ E+ VL+F+ R +G + L+LSTRP K +G WE+A L EA ++ ++EG GAFYGPKI + DA+ R +Q +T+Q+DFQLP RF++ Y A D + +RP MIHRA+ G++ER FAILLEHY G P WL+P Q + P++ PY V + + G V+ Sbjct: 365 RSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFCAREQLPTELDTVLKFVLGLLRDYGLEDFYLELSTRPPGKAIGSDKEWEEATELLREAASKQDLELVMDEGGGAFYGPKISVQARDAIGRTWQLSTIQVDFQLPQRFDMTYQAADGTR-QRPFMIHRALFGTIERFFAILLEHYAGALPPWLAPVQVVGIPITDEHVPYLTDVAAKLRQRGIRVE 590
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_VARPS (Threonyl-tRNA synthetase OS=Variovorax paradoxus (strain S110) GN=thrS PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.173e-50 Identity = 105/226 (46.46%), Postives = 137/226 (60.62%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYEL-KLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697 +RSYR+LPLR +FG HRNE SGAL G+ RVR F QDD HIFC E QI +E + Y FGFT L K++TRP+ +G W+KAE A+ EAL G + I+ GDGAFYGPKI+ ++ DAL R++QC T+Q+DF +R Y E + PVM+HRAI+GS+ER +L+EH+ G P WL+P Q V +S YA V + G V Sbjct: 344 LRSYRDLPLRYGEFGQCHRNEPSGALHGIMRVRGFTQDDGHIFCTEDQILEECVAYTAQLQKVYADFGFTEILYKVATRPDNRVGSDELWDKAEHAVMEALRRSGVDFIISPGDGAFYGPKIEYTLKDALGRQWQCGTMQVDFNTAERLGGEYVTETSGRA-HPVMLHRAIVGSLERFIGMLIEHHAGALPAWLAPVQVAVLNISEGQADYAASVAKTLQNQGLRV 568
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_LEIXX (Threonyl-tRNA synthetase OS=Leifsonia xyli subsp. xyli GN=thrS PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.173e-50 Identity = 105/211 (49.76%), Postives = 139/211 (65.88%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTR-PEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPY 652 RSYRELPLRL++FG ++R E SG L+GLTRVR QDDAHI+ E QI+DE L+F+ R +G T + L+LST+ PEKY+G +WE A L E E G + G AFYGPKI + DA+ R +Q +T+QLDF P+ F L Y+A D + ++P MIHRA+LGS+ER FAILLEH+ G +P WL+P Q + PV+ P+ Sbjct: 396 RSYRELPLRLSEFGTVYRYEKSGTLSGLTRVRGLTQDDAHIYVTEEQIRDEFARQLQFVLETLRGYGLTDFYLELSTKDPEKYVGSDESWETATETLREVAVESGLELVDDPGGAAFYGPKISVQARDAIGRTWQLSTVQLDFNQPELFELEYNAADGTR-KQPAMIHRALLGSIERFFAILLEHHAGAFPVWLAPTQVVGIPVADAYGPF 605
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_BAUCH (Threonyl-tRNA synthetase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=thrS PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.144e-50 Identity = 102/223 (45.74%), Postives = 138/223 (61.88%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYEL-KLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRA 685 ++ SYR+LPLR+A+FG +RNE SG+L GL RVR F QDDAHIFC E Q+ DE+ ++ + Y FGF L LSTRP +G+ W+KAE L L G ++ N G GAFYGPKI+ ++ D+ R +QC T+QLDF LP R Y ++ + PVMIHRAILGS+ER IL+E Y G +P WL+P Q ++ +S Y +Q+ + A Sbjct: 344 QINSYRDLPLRMAEFGSCYRNEPSGSLHGLMRVRNFTQDDAHIFCTEEQVCDEINNNIKMLYEVYHTFGFKKILVNLSTRPAHRIGNDKIWDKAEQDLATTLTNNGILFKYNVGAGAFYGPKIEFTLLDSFDRAWQCGTIQLDFSLPSRLKAFYINKNNQRLV-PVMIHRAILGSLERFIGILIEEYAGFFPTWLAPTQVVLMNISDNQSNYVIQLMQKLSTA 565
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_RHILO (Threonyl-tRNA synthetase OS=Rhizobium loti GN=thrS PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.412e-50 Identity = 103/229 (44.98%), Postives = 141/229 (61.57%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGF-TYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGK------PWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688 ++SYR+LP++LA+FG +HR E SGAL GL RVR F QDDAHIFC E Q+ E + + I Y FGF +KLSTRP+K +G W+ AEA + L IN G+GAFYGPK + + DA+ R++QC T Q+DF LP+RF Y D K ++PVM+HRAI GS+ER IL+E+Y G +P W +P+Q +V ++ + YA +V + AG Sbjct: 354 LKSYRDLPVKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQLASECLRINDLILSTYADFGFDEISVKLSTRPDKRVGTDEAWDHAEAIMGSVLETIRTRSGNRIKTSINPGEGAFYGPKFEYVLKDAIGREWQCGTTQVDFNLPERFGAFYIGSDSEK-KQPVMVHRAICGSMERFLGILIENYSGHFPLWFAPQQVVVATITSEADGYATEVVAKLKAAG 581
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_LISMO (Threonyl-tRNA synthetase OS=Listeria monocytogenes GN=thrS PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.412e-50 Identity = 107/228 (46.93%), Postives = 147/228 (64.47%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRP----EKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQ-PYALQVRDHIYRAG 688 + SYRELP+R+A+ G++HR E SGAL+GL RVR +DAH+F R QIKDE + V+E I Y+ F T Y +LS R EKY D A WEKA+A L A++E + EG+ AFYGPK+D+ V A+ ++ +T+QLDF LP+RF+L Y ED K RPV+IHR ++ ++ER A L+E YKG +P WL+P Q + PV+ + YA V+D + RAG Sbjct: 345 IHSYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDITDYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEMEMDYFEAEGEAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEK-HRPVVIHRGVVSTMERFVAYLIEEYKGAFPTWLAPVQMEIIPVNADAHLDYAKGVQDKLQRAG 571
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_ARTAT (Threonyl-tRNA synthetase OS=Arthrobacter aurescens (strain TC1) GN=thrS PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.412e-50 Identity = 106/223 (47.53%), Postives = 138/223 (61.88%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTR-PEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688 RSYRELPLRL +FG ++R E SG + GLTRVR QDDAHI+C Q+KDE+ L F+ + +G + L+LST+ EK++GD A WE+A L+E G + G AFYGPKI + DAL R +Q +T+QLDF LP+RF L Y A D + +RPVMIHRA+ GSVER +L EHY G +P WL+P Q + PV+ Y V + AG Sbjct: 377 RSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQMKDELTTTLNFVLGLLKDYGLDDFYLELSTKNEEKFVGDDAAWEEATRTLSEVAEASGLHLVPDPGGAAFYGPKISVQAKDALGRTWQMSTIQLDFNLPERFELEYQAADGTR-QRPVMIHRALFGSVERFMGVLTEHYAGAFPAWLAPVQVVGIPVAETFNDYMFDVVGQLKAAG 598
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_SULSO (Threonyl-tRNA synthetase OS=Sulfolobus solfataricus GN=thrS PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 7.068e-50 Identity = 106/218 (48.62%), Postives = 144/218 (66.06%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYE-LK--LSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQV 664 K R+YR+LP+R ++FG ++R E G L GL RVR F QDD HIF RE Q+++E++ ++ + FGF + +K LSTRP++ +G WEKA AL AL E G + I E +GAFYGPKID + D+L R +Q +T+Q+DF LP+RF L Y +D K +RPVM+HRAI GS++R AILLEH+KGK P WLS Q V P++ YA +V Sbjct: 241 KPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLREDQLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNALISALQESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGIK-KRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKV 457
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_SULIY (Threonyl-tRNA synthetase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=thrS PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 7.068e-50 Identity = 106/218 (48.62%), Postives = 144/218 (66.06%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYE-LK--LSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQV 664 K R+YR+LP+R ++FG ++R E G L GL RVR F QDD HIF RE Q+++E++ ++ + FGF + +K LSTRP++ +G WEKA AL AL E G + I E +GAFYGPKID + D+L R +Q +T+Q+DF LP+RF L Y +D K +RPVM+HRAI GS++R AILLEH+KGK P WLS Q V P++ YA +V Sbjct: 241 KPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLREDQLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNALISALQESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGIK-KRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKV 457 The following BLAST results are available for this feature:
BLAST of DN135274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135274 ID=DN135274; Name=DN135274; organism=Citrus sinensis; type=EST; length=701bpback to top |