DN135274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PSEE4 (Threonyl-tRNA synthetase OS=Pseudomonas entomophila (strain L48) GN=thrS PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.417e-60 Identity = 113/224 (50.45%), Postives = 151/224 (67.41%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGY 691 ++SYR+LPLRLA+FG HRNE SGAL G+ RVR F QDDAHIFC E Q+K E ++ Y+ FGFT +KLSTRP K +G W++AE AL +ALNE G W+ G+GAFYGPKI+ ++ D L R +QC TLQ D LP+R + Y AED ++ RPVM+HRAILGS ER +L+EHY G +P WL+P QA++ ++ +AL+V + +G+ Sbjct: 344 LKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEAADFIKLTLDVYKDFGFTDVAMKLSTRPAKRVGSEELWDRAEGALADALNESGLEWEYQPGEGAFYGPKIEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAEDNSRV-RPVMLHRAILGSFERFIGMLIEHYAGVFPAWLAPTQAVIMNITDKQADFALEVEKALNGSGF 566
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PSE14 (Threonyl-tRNA synthetase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=thrS PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.417e-60 Identity = 115/224 (51.34%), Postives = 152/224 (67.86%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGY 691 ++SYRELP+RLA+FG HRNE SGAL G+ RVR F QDDAHIFC E Q++ E ++ Y FGF ELKLSTRPEK +G WE+AE AL AL+ G P+ + G+GAFYGPKI+ S+ D L R +QC TLQLDF LP R + Y +ED ++ + PVM+HRAILGS ER IL+EHY+G +P WL+P QA++ ++ +AL+V + +G+ Sbjct: 344 LKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWERAETALASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSR-KNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGF 566
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_NEOSM (Threonyl-tRNA synthetase OS=Neorickettsia sennetsu (strain Miyayama) GN=thrS PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.768e-60 Identity = 116/223 (52.02%), Postives = 152/223 (68.16%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688 ++SYR+LPLRLA+FG+ HRNEASGAL GL RVR F QDDAHIFC QI DE + YR GFT E++ S RPE LG+ TW+KAE AL A+++ G + +N G+GAFYGPKI+ + DALKRK+QC TLQ+DF LP+R + Y + E K + PVM+HRAILG+ ER IL+EHY GK+P WL+P Q V ++ + YA + +H+ + G Sbjct: 347 LKSYRDLPLRLAEFGMCHRNEASGALHGLMRVRGFVQDDAHIFCTPQQICDETIAFCGLLKEVYRDLGFTEVEVRFSDRPEVRLGNDETWDKAEIALKSAMDKAGLIYTLNPGEGAFYGPKIEFVLVDALKRKWQCGTLQVDFVLPERLDATY-IDHEGKKQHPVMLHRAILGTFERFLGILIEHYDGKFPLWLAPTQVAVLTITEKVEEYAKSLLNHLSKTG 568
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_AZOSE (Threonyl-tRNA synthetase OS=Azoarcus sp. (strain EbN1) GN=thrS PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.768e-60 Identity = 118/227 (51.98%), Postives = 150/227 (66.08%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYEL-KLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 ++SYR+LPLR+A+FG HRNE SGAL G+ RVR F QDDAHIFC + Q++ E +E + Y FGFT L KLSTRP+K +G W+ AEAAL AL+ G + + G+GAFYGPKI+ S+ D L R +QC TLQLDF LP R Y AED AK PVM+HRAILGS+ER IL+EHY G P WL+P A+V +S YA +V + +AG+ V+ Sbjct: 344 LKSYRDLPLRMAEFGSCHRNEPSGALHGIMRVRNFVQDDAHIFCADEQVQTEAAAFIELLQKVYADFGFTEILIKLSTRPDKRVGTDDQWDAAEAALAAALDAQGLAYDLQPGEGAFYGPKIEFSLKDCLNRVWQCGTLQLDFNLPVRLGAEYVAEDNAK-HYPVMLHRAILGSLERFIGILIEHYAGALPLWLAPVHAVVLNISEGQTDYATEVARRLKQAGFRVE 569
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PSEU2 (Threonyl-tRNA synthetase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=thrS PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.534e-60 Identity = 114/224 (50.89%), Postives = 153/224 (68.30%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGY 691 ++SYRELP+RLA+FG HRNE SGAL G+ RVR F QDDAHIFC E Q++ E ++ Y FGF ELKLSTRPEK +G W++AE+AL AL+ G P+ + G+GAFYGPKI+ S+ D L R +QC TLQLDF LP R + Y +ED ++ + PVM+HRAILGS ER IL+EHY+G +P WL+P QA++ ++ +AL+V + +G+ Sbjct: 344 LKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSR-KNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGF 566
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PSEPK (Threonyl-tRNA synthetase OS=Pseudomonas putida (strain KT2440) GN=thrS PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.840e-60 Identity = 112/224 (50.00%), Postives = 151/224 (67.41%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGY 691 ++SYR+LPLRLA+FG HRNE SGAL G+ RVR F QDDAHIFC E Q+K E ++ Y+ FGF+ +KLSTRP K +G W++AE AL +ALNE G W+ G+GAFYGPKI+ ++ D L R +QC TLQ D LP+R + Y AED ++ RPVM+HRAILGS ER +L+EHY G +P WL+P QA++ ++ +AL+V + +G+ Sbjct: 344 LKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEAADFIKLTLDVYKDFGFSDIAMKLSTRPAKRVGSEELWDRAETALADALNESGLEWEYQPGEGAFYGPKIEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAEDNSRV-RPVMLHRAILGSFERFIGMLIEHYAGVFPAWLAPTQAVIMNITDKQADFALEVEKSLNGSGF 566
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PSEPG (Threonyl-tRNA synthetase OS=Pseudomonas putida (strain GB-1) GN=thrS PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.840e-60 Identity = 112/224 (50.00%), Postives = 151/224 (67.41%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGY 691 ++SYR+LPLRLA+FG HRNE SGAL G+ RVR F QDDAHIFC E Q+K E ++ Y+ FGF+ +KLSTRP K +G W++AE AL +ALNE G W+ G+GAFYGPKI+ ++ D L R +QC TLQ D LP+R + Y AED ++ RPVM+HRAILGS ER +L+EHY G +P WL+P QA++ ++ +AL+V + +G+ Sbjct: 344 LKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEEQVKKEAADFIKLTLDVYKDFGFSDIAMKLSTRPAKRVGSEELWDRAETALADALNESGLEWEYQPGEGAFYGPKIEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAEDNSRV-RPVMLHRAILGSFERFIGMLIEHYAGVFPAWLAPTQAVIMNITDKQADFALEVEKSLNGSGF 566
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PSEP1 (Threonyl-tRNA synthetase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=thrS PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.840e-60 Identity = 112/224 (50.00%), Postives = 151/224 (67.41%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGY 691 ++SYR+LPLRLA+FG HRNE SGAL G+ RVR F QDDAHIFC E Q+K E ++ Y+ FGF+ +KLSTRP K +G W++AE AL +ALNE G W+ G+GAFYGPKI+ ++ D L R +QC TLQ D LP+R + Y AED ++ RPVM+HRAILGS ER +L+EHY G +P WL+P QA++ ++ +AL+V + +G+ Sbjct: 344 LKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEEQVKKEAADFIKLTLDVYKDFGFSDIAMKLSTRPAKRVGSEELWDRAETALADALNESGLEWEYQPGEGAFYGPKIEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAEDNSRV-RPVMLHRAILGSFERFIGMLIEHYAGVFPAWLAPTQAVIMNITDKQTDFALEVEKSLNGSGF 566
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PSEAE (Threonyl-tRNA synthetase OS=Pseudomonas aeruginosa GN=thrS PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.840e-60 Identity = 114/224 (50.89%), Postives = 150/224 (66.96%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGY 691 ++SYR+LPLRLA+FG HRNE SGAL G+ RVR F QDDAHIFC E Q+K E ++ YR FGFT +KLSTRP K +G W++AE AL +ALNE G W+ G+GAFYGPKI+ ++ D L R +QC TLQ D LP+R + Y AED + +RPVM+HRAILGS ER +L+EHY G +P WL+P QA+V ++ +A +V + +G+ Sbjct: 344 LKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTRPAKRVGSDELWDRAEGALADALNESGLAWEYQPGEGAFYGPKIEFTLKDCLGRNWQCGTLQYDPNLPERLDASYIAEDNNR-KRPVMLHRAILGSFERFIGMLIEHYAGAFPAWLAPTQAVVMNITDKQADFAAEVVRILGESGF 566
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PSEAB (Threonyl-tRNA synthetase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=thrS PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.840e-60 Identity = 114/224 (50.89%), Postives = 150/224 (66.96%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGY 691 ++SYR+LPLRLA+FG HRNE SGAL G+ RVR F QDDAHIFC E Q+K E ++ YR FGFT +KLSTRP K +G W++AE AL +ALNE G W+ G+GAFYGPKI+ ++ D L R +QC TLQ D LP+R + Y AED + +RPVM+HRAILGS ER +L+EHY G +P WL+P QA+V ++ +A +V + +G+ Sbjct: 344 LKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTRPAKRVGSDELWDRAEGALADALNESGLAWEYQPGEGAFYGPKIEFTLKDCLGRNWQCGTLQYDPNLPERLDASYIAEDNNR-KRPVMLHRAILGSFERFIGMLIEHYAGAFPAWLAPTQAVVMNITDKQADFAAEVVRILGESGF 566 The following BLAST results are available for this feature:
BLAST of DN135274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN135274 ID=DN135274; Name=DN135274; organism=Citrus sinensis; type=EST; length=701bpback to top |