DN135209
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135209 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.999e-21 Identity = 51/68 (75.00%), Postives = 54/68 (79.41%), Query Frame = 1 Query: 4 IERERWKMENPEAMXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGFGSEFRF 207 IE+E+ + ENPEAM IKA HFEESMKYARRSVSDADIRKYQ FAQTLQQSRGFGSEFRF Sbjct: 711 IEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 778
BLAST of DN135209 vs. ExPASy Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.663e-20 Identity = 55/76 (72.37%), Postives = 56/76 (73.68%), Query Frame = 1 Query: 4 IERERWKMENPEAMXXXXXXXXXX-IKAVHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGFGSEFRF---ADRT 219 IERER ENPEAM IKA HFEESMK+ARRSVSDADIRKYQ FAQTLQQSRGFGSEFRF DRT Sbjct: 711 IERERKSRENPEAMDEDTVDDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPESGDRT 786
BLAST of DN135209 vs. ExPASy Swiss-Prot
Match: CDC48_CAPAN (Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.131e-19 Identity = 50/70 (71.43%), Postives = 55/70 (78.57%), Query Frame = 1 Query: 4 IERERWKMENPEAMXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGFGSEFRFAD 213 IERE+ + ENP++M IK HFEESMKYARRSVSDADIRKYQ FAQTLQQSRGFG+EFRFAD Sbjct: 711 IEREKRRQENPDSMDEDVDEVPE-IKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAD 779
BLAST of DN135209 vs. ExPASy Swiss-Prot
Match: CD48D_ARATH (Cell division control protein 48 homolog D OS=Arabidopsis thaliana GN=CDC48D PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.131e-19 Identity = 52/70 (74.29%), Postives = 55/70 (78.57%), Query Frame = 1 Query: 4 IERERWKMENPEAMXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGFGSEFRFAD 213 IE+ER + E+PEAM IKA HFEESMKYARRSVSDADIRKYQ FAQTLQQSRGFGSEFRF D Sbjct: 711 IEKERKRAESPEAMEEDEEEIAE-IKAGHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPD 779
BLAST of DN135209 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 5.615e-19 Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 1 Query: 4 IERERWKMENPEAMXXXXXXXXXX-IKAVHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGFGSEFRF 207 IE ER + +NPEAM I+A HFEESMKYARRSVSDADIRKYQ FAQTLQQSRGFGSEFRF Sbjct: 710 IENERRRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 778
BLAST of DN135209 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.391e-15 Identity = 42/68 (61.76%), Postives = 49/68 (72.06%), Query Frame = 1 Query: 4 IERERWKMENPEAMXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGFGSEFRF 207 I RER + NP AM I+ HFEE+M++ARRSVSD DIRKY++FAQTLQQSRGFGS FRF Sbjct: 707 IRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 773
BLAST of DN135209 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 8.391e-15 Identity = 42/68 (61.76%), Postives = 49/68 (72.06%), Query Frame = 1 Query: 4 IERERWKMENPEAMXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGFGSEFRF 207 I RER + NP AM I+ HFEE+M++ARRSVSD DIRKY++FAQTLQQSRGFGS FRF Sbjct: 707 IRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 773
BLAST of DN135209 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5) HSP 1 Score: 80.4925 bits (197), Expect = 8.391e-15 Identity = 42/68 (61.76%), Postives = 49/68 (72.06%), Query Frame = 1 Query: 4 IERERWKMENPEAMXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGFGSEFRF 207 I RER + NP AM I+ HFEE+M++ARRSVSD DIRKY++FAQTLQQSRGFGS FRF Sbjct: 707 IRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 773
BLAST of DN135209 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4) HSP 1 Score: 80.4925 bits (197), Expect = 8.391e-15 Identity = 42/68 (61.76%), Postives = 49/68 (72.06%), Query Frame = 1 Query: 4 IERERWKMENPEAMXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGFGSEFRF 207 I RER + NP AM I+ HFEE+M++ARRSVSD DIRKY++FAQTLQQSRGFGS FRF Sbjct: 707 IRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 773
BLAST of DN135209 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4) HSP 1 Score: 80.4925 bits (197), Expect = 8.391e-15 Identity = 42/68 (61.76%), Postives = 49/68 (72.06%), Query Frame = 1 Query: 4 IERERWKMENPEAMXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGFGSEFRF 207 I RER + NP AM I+ HFEE+M++ARRSVSD DIRKY++FAQTLQQSRGFGS FRF Sbjct: 707 IRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 773 The following BLAST results are available for this feature:
BLAST of DN135209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN135209 ID=DN135209; Name=DN135209; organism=Citrus sinensis; type=EST; length=649bpback to top |