DN135197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_ECHGR (40S ribosomal protein SA OS=Echinococcus granulosus PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.509e-52 Identity = 98/192 (51.04%), Postives = 136/192 (70.83%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 L KE DI++M+AA+VHLG+ N ++QM++YV+ R ++G +II+L KTWEKL +AAR I AIENP D+++ +P QR LKF YT ++ GR TPG FTNQ+Q+ F EPRLLI+ DP+ DHQP++E + N P I FC+TDSP++ VDIGIP NN K+SI + W+LAR V ++ G DV++ Sbjct: 8 LELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLLAARAICAIENPADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPRLLIVCDPKGDHQPVREGSAVNIPVIGFCNTDSPLQCVDIGIPCNN-DKYSIALMLWMLAREVRRIWGLDPRSQPGDVIM 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_SCHJA (40S ribosomal protein SA OS=Schistosoma japonicum GN=SJCHGC06078 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.731e-51 Identity = 97/185 (52.43%), Postives = 126/185 (68.11%), Query Frame = 1 Query: 130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVM 684 D+++MLAA VH+G N +FQM YV R D +II L KTWEK+ ++AR I AI+ D+ +RP+ QRAVLKFA YT A A+AGR TPG FTNQ Q+ F EPRLL+++DP +DHQ + EA+ N P IA C+TDSP+ VDI IP NNK HSI ++W LAR V ++RG +W V+ Sbjct: 14 DLRLMLAAHVHVGETNMNFQMSTYVHGRTKDNFHIIKLDKTWEKILLSARAIAAIDTASDVFAIGSRPFSQRAVLKFANYTGATAMAGRFTPGAFTNQKQSCFREPRLLVVSDPLSDHQAVMEASSVNVPLIALCNTDSPLTRVDIVIPCNNKSTHSIAVVWWFLAREVRRIRGEDTRLQQWSVL 198
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_STRPU (40S ribosomal protein SA (Fragment) OS=Strongylocentrotus purpuratus PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.758e-40 Identity = 74/122 (60.66%), Postives = 97/122 (79.51%), Query Frame = 1 Query: 322 SARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 S+RPYGQRAVLKF +T A +AGR+TPGTFTNQ+Q +F EPR+LI+TDPR+DHQP+ EA+ N P IA C++DSP+R+VDI IP NNK HSIG ++W+L+R VL++RG I W++MV Sbjct: 1 SSRPYGQRAVLKFGAHTGATPVAGRYTPGTFTNQIQAAFREPRILIVTDPRSDHQPVTEASYVNIPVIALCNSDSPLRHVDIAIPCNNKSIHSIGLMWWMLSREVLRLRGAISRDVTWEIMV 122
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_SULSO (30S ribosomal protein S2P OS=Sulfolobus solfataricus GN=rps2p PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.865e-39 Identity = 83/189 (43.92%), Postives = 128/189 (67.72%), Query Frame = 1 Query: 115 SQKEADIQMM------LAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 S+K A I+++ L+A VH+GT +C ME +V++ R +G+Y++++ K E+L++AA+ + + P DIIV ++RPY R V KFA+ + A+ GR PGTFTN +++ EP++L+++DPRTD Q IKEAA P +AF DTD+ + Y+D+ IPANNKG+ S+ L+W LAR +L+ R I P Sbjct: 27 SEKGAIIELLVPVDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRYD-PQDIIVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSDPRTDTQAIKEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALLYWALARQILRERRVIPP 214
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_METS3 (30S ribosomal protein S2P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps2p PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.436e-39 Identity = 76/182 (41.76%), Postives = 120/182 (65.93%), Query Frame = 1 Query: 112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 657 +S+ ++ LAA +H+GT+ ME+Y+F+ R+DG+Y++++ KT E+++ A+++ + P DI+V + R YGQ V KF + T A I GR PGT TN F EP+++++TDPR+D Q + E+ P IA CDT++ + +VDI IP NNKG+ +I ++WLLAR +L+ RGTI Sbjct: 1 MSELLIELDNYLAAGLHIGTQQKTSDMEKYIFRVRSDGLYVLDIQKTDERIRQIAKLLARYD-PEDILVVATRQYGQAPVKKFGEVTGAKTIPGRFIPGTLTNPTYAKFIEPKIIVVTDPRSDAQAVLESKQNGIPVIALCDTENLLSFVDIAIPVNNKGRKAIALVYWLLARQILRERGTI 181
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_STAMF (30S ribosomal protein S2P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps2p PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.746e-37 Identity = 82/196 (41.84%), Postives = 119/196 (60.71%), Query Frame = 1 Query: 76 KMATGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 663 K A T T P + + ++ LAA VH+GT C ME +V++ RNDG+YI+++ K E++++AA+ + E P I S R YGQ+ V+KF Y GR PGTFTN + EP +++LTDPR D Q +KEAA P ++ DTD+ Y+D+ IPANNKG+ S+ ++WLLAR +L+ RG + P Sbjct: 11 KSAEKTQTKP--VIELLIPLEKYLAAGVHIGTHICTKFMEPFVYRVRNDGLYILDVRKIDERIRIAAKFLSRYE-PSKIAAVSVRTYGQKPVVKFCNYVGCKPFTGRFMPGTFTNPSLKWYFEPDIVLLTDPRADSQALKEAAEIGIPIVSLADTDNRTEYIDLIIPANNKGRKSLALIYWLLARQILRERGLLPP 203
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_PYRHO (30S ribosomal protein S2P OS=Pyrococcus horikoshii GN=rps2p PE=3 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.889e-37 Identity = 75/185 (40.54%), Postives = 117/185 (63.24%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 + LAA VH+GT+ M++++++ R DG+Y++++ KT E+L++A + + E P I+ S R YGQ+ V KF + T A AI GR PGT TN +F EP ++I+TDPR DHQ +KEA P +A DT++ + YVD+ IP NNKG+ ++ ++W+LAR +L RG I ++ + V Sbjct: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFE-PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPEVIIITDPRADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKIPV 192
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_PYRFU (30S ribosomal protein S2P OS=Pyrococcus furiosus GN=rps2p PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.663e-37 Identity = 75/185 (40.54%), Postives = 117/185 (63.24%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 + LAA VH+GT+ M++++++ R DG+Y++++ KT E+L++A + + E P I+ S R YGQ+ V KF + T A AI GR PGT TN +F EP +LI+TDPR DHQ ++EA P +A DT++ + YVD+ IP NNKG+ ++ ++W+LAR +L RG I+ + + V Sbjct: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLAKFE-PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVLIVTDPRADHQAMREAVEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEIQSREDFKIPV 192
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_PYRAB (30S ribosomal protein S2P OS=Pyrococcus abyssi GN=rps2p PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.478e-36 Identity = 74/185 (40.00%), Postives = 117/185 (63.24%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 + LAA VH+GT+ M++++++ R DG+Y++++ KT E+L++A + + + P I+ S R YGQ+ V KF + T A AI GR PGT TN +F EP ++I+TDPR DHQ +KEA P +A DT++ + YVD+ IP NNKG+ ++ ++W+LAR +L RG I ++ + V Sbjct: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKIPV 192
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RS2_PYRKO (30S ribosomal protein S2P OS=Pyrococcus kodakaraensis GN=rps2p PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36 Identity = 77/185 (41.62%), Postives = 115/185 (62.16%), Query Frame = 1 Query: 133 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687 + LAA VH+GT+ M++++++ R DG+Y++++ KT E+L++A + + + P I+ S R YGQR V KF + T A AI GR PGT TN +F EP +LI+TDPR DHQ +KEA P +A DT++ + YVDI IP NNKG+ ++ ++W+LAR VL R I + + V Sbjct: 8 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLRVAGKFLAKFD-PESILAVSVRLYGQRPVKKFGEVTGAKAIPGRFLPGTMTNPQVKNFIEPDVLIVTDPRADHQALKEAVEIGIPIVALVDTENFLSYVDIAIPTNNKGRKALALIYWILAREVLYNRKEIESREDFKIPV 191 The following BLAST results are available for this feature:
BLAST of DN135197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135197 ID=DN135197; Name=DN135197; organism=Citrus sinensis; type=EST; length=687bpback to top |