DN135197

Overview
NameDN135197
Unique NameDN135197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length687
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig423 contig Csv1_Contig423:3..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_BOTFB (40S ribosomal protein S0 OS=Botryotinia fuckeliana (strain B05.10) GN=rps0 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.388e-63
Identity = 121/201 (60.20%), Postives = 148/201 (73.63%), Query Frame = 1
Query:  100 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMV 687
            AP QL    +    DI+ +LAA+ HLG KN    ME Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  N P IA CDTDSP  +VD+ IP NNKG+HSIG ++W+LAR VL++RG+I     +WD MV
Sbjct:    2 APSQLPAIFNPTSQDIEQLLAAQCHLGAKNLQVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGSIASREAEWDTMV 202          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_ASPOR (40S ribosomal protein S0 OS=Aspergillus oryzae GN=rps0 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.388e-63
Identity = 118/200 (59.00%), Postives = 150/200 (75.00%), Query Frame = 1
Query:  100 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVM 684
            AP QL    +  + DI+ +LAA+ HLG+KN    ME Y++K R DG+ +IN+GKTWEK+ +AAR+I A+ENP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  N P +A CDTDSP  +VD+ IP NNKG+HSIG ++W+LAR VL++RGT+     +WDV+
Sbjct:    2 APSQLPPIFNPTQQDIEQLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIAAVENPADICVISARPYGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVLALCDTDSPTDFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGTLATRETEWDVV 201          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_ASPFN (40S ribosomal protein S0 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=rps0 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.388e-63
Identity = 118/200 (59.00%), Postives = 150/200 (75.00%), Query Frame = 1
Query:  100 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVM 684
            AP QL    +  + DI+ +LAA+ HLG+KN    ME Y++K R DG+ +IN+GKTWEK+ +AAR+I A+ENP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  N P +A CDTDSP  +VD+ IP NNKG+HSIG ++W+LAR VL++RGT+     +WDV+
Sbjct:    2 APSQLPPIFNPTQQDIEQLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIAAVENPADICVISARPYGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVLALCDTDSPTDFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGTLATRETEWDVV 201          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_CULQU (40S ribosomal protein SA OS=Culex quinquefasciatus GN=CPIJ013899 PE=3 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 7.038e-63
Identity = 115/190 (60.53%), Postives = 146/190 (76.84%), Query Frame = 1
Query:  112 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDV 681
            L+ K+ D+  MLAA  H+G+ + +FQME YVFKRR DG++IINLG+TWEKL +AAR I +IE PG++   S+R +GQRAVLKFA YT A  IAGR TPG FTNQ+Q +F EPRLLI+TDP TDHQP+ EA+  N P IAFC+TDSP+++VDI IP N K  HSIG ++WLLAR VL++RG I    KW++
Sbjct:    8 LALKDDDVNKMLAATTHVGSTSVNFQMESYVFKRRPDGVHIINLGRTWEKLLLAARCIASIEYPGEVFAISSRQFGQRAVLKFAHYTEATPIAGRFTPGAFTNQIQPAFREPRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPLKFVDIAIPCNTKSPHSIGLMWWLLAREVLKLRGKI--SDKWEL 195          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA3_SCHJY (40S ribosomal protein S0-C OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=rps0c PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.038e-63
Identity = 115/195 (58.97%), Postives = 144/195 (73.85%), Query Frame = 1
Query:  103 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMV 687
            P  L+  E DI+ +LAA  H+G+KN + +ME YV+KRR DG+ IIN+GKTWEK+ +AAR+I  +ENP D+ V S+RPYG RAVLKFA +T A AIAGR TPG FTN +  +F EPRL+I TDPR D Q IKEA+  N P IA CDTDSP+ +VD+ IP NNKG  SIG ++WLLAR VL++RG +     WDVMV
Sbjct:    8 PSVLNATEEDIKQLLAASCHIGSKNLEIRMENYVWKRRADGVNIINIGKTWEKIVLAARIIATVENPADVCVVSSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTFREPRLIIATDPRADAQAIKEASYVNIPVIALCDTDSPLAHVDVAIPTNNKGYKSIGLVWWLLAREVLRLRGALTRTGAWDVMV 202          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_PNECA (40S ribosomal protein S0 OS=Pneumocystis carinii GN=RPS0 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.568e-62
Identity = 115/193 (59.59%), Postives = 151/193 (78.24%), Query Frame = 1
Query:  115 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAH-AIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMV 687
            +Q  ADI+M+++A  H+G++NC+ +ME YVFKRR DG++IINLGK WEKL +AAR+IV IENP DII  S+R YGQRAV K+A +T A  AI+ R TPG+FTN +  S+ EPRL+I+TDPRTD Q IKEA+  N P IA CDTDSP++YVD+ IP NNKG+HSIG ++W+LAR VL++RGT+     +W +MV
Sbjct:    6 AQPAADIEMLISANCHIGSRNCELRMEPYVFKRRADGVHIINLGKRWEKLILAARIIVTIENPTDIIAVSSRSYGQRAVHKYALHTGAREAISSRFTPGSFTNYITRSYKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPLQYVDVAIPTNNKGRHSIGLIWWMLAREVLRLRGTLANRDVEWGIMV 198          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_PENCW (40S ribosomal protein S0 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=rps0 PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.048e-62
Identity = 117/201 (58.21%), Postives = 150/201 (74.63%), Query Frame = 1
Query:  100 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMV 687
            AP QL    +    DI+M+LAA+ HLG+KN    ME Y++K R DG+ ++N+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  N P IA CDTDSP  +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+     +WD +V
Sbjct:    2 APSQLPPVFNPTAQDIEMLLAAQCHLGSKNLQVHMEPYLWKLRADGVNVLNIGKTWEKIVLAARIIAAIDNPADVCVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLVWWMLAREVLRLRGTLATRETEWDTVV 202          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_MALGO (40S ribosomal protein S0 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.562e-62
Identity = 116/196 (59.18%), Postives = 146/196 (74.49%), Query Frame = 1
Query:  103 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMV 687
            P  L+    DI ++LAA+ H+GTKNC+  M  YV KRR DGI++IN+GKTWEKL  AARV+ A+ENP DI V S+R YG RAV KFA  T A AIAGR TPG+FTN +  SF EPR++++TDPR DHQ I+E+A  N P IA CDTD+P+R+VDI IP NNKG+HSIG L+WLL R  L++RG + R  + W+VMV
Sbjct:    6 PAILNPTPEDISLLLAAQTHIGTKNCEKAMLPYVHKRRADGIHLINIGKTWEKLVFAARVLAAVENPADICVISSRTYGHRAVHKFAANTGATAIAGRFTPGSFTNYITRSFKEPRVIVVTDPRVDHQAIRESAYVNIPVIALCDTDAPLRHVDIAIPGNNKGRHSIGLLWWLLCREFLRLRGIVPRTPNGWNVMV 201          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_NANOT (40S ribosomal protein S0 OS=Nannizzia otae (strain CBS 113480) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.958e-62
Identity = 112/187 (59.89%), Postives = 145/187 (77.54%), Query Frame = 1
Query:  130 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMV 687
            D++MML A+ HLG+KN    ME Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG+FTN +  SF EPRL+++TDPRTD Q IKEA+  N P IA CD DSP  +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+     +WD++V
Sbjct:   16 DMEMMLTAQCHLGSKNMQTHMEPYLWKTRPDGVNVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYITRSFKEPRLIVVTDPRTDAQAIKEASYVNIPVIALCDADSPTEFVDVAIPTNNKGRHAIGLVWWMLAREVLRLRGTLASRETEWDIVV 202          
BLAST of DN135197 vs. ExPASy Swiss-Prot
Match: RSSA_TOXGO (40S ribosomal protein SA OS=Toxoplasma gondii PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.733e-61
Identity = 118/195 (60.51%), Postives = 144/195 (73.85%), Query Frame = 1
Query:  109 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNTPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHK--WDVMV 687
            +LS +E  I  ML  + H+GTKN + +M  YVFK  ++GI++INL KTWEK+ MAARVIVAIENP D++V SARPYG RAVLKF++Y  A AIAGR TPG  TNQ+   F EPRLLI+TDPRTD Q ++E+A  N P IA CDTDSP+ +VDI IP NNKGK SI  ++WLLAR VL +RG + P     WDVMV
Sbjct:    8 KLSLQEDSIAKMLICKAHIGTKNVEHKMRPYVFKSTSEGIHLINLAKTWEKILMAARVIVAIENPADVLVISARPYGSRAVLKFSQYVGAQAIAGRWTPGMLTNQITQKFMEPRLLIVTDPRTDAQAVRESAYANVPVIALCDTDSPLEHVDICIPCNNKGKESIALMYWLLAREVLYLRGEL-PSRSVPWDVMV 201          
The following BLAST results are available for this feature:
BLAST of DN135197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RSSA_BOTFB5.388e-6360.2040S ribosomal protein S0 OS=Botryotinia fuckeliana... [more]
RSSA_ASPOR5.388e-6359.0040S ribosomal protein S0 OS=Aspergillus oryzae GN=... [more]
RSSA_ASPFN5.388e-6359.0040S ribosomal protein S0 OS=Aspergillus flavus (st... [more]
RSSA_CULQU7.038e-6360.5340S ribosomal protein SA OS=Culex quinquefasciatus... [more]
RSSA3_SCHJY7.038e-6358.9740S ribosomal protein S0-C OS=Schizosaccharomyces ... [more]
RSSA_PNECA1.568e-6259.5940S ribosomal protein S0 OS=Pneumocystis carinii G... [more]
RSSA_PENCW2.048e-6258.2140S ribosomal protein S0 OS=Penicillium chrysogenu... [more]
RSSA_MALGO4.562e-6259.1840S ribosomal protein S0 OS=Malassezia globosa (st... [more]
RSSA_NANOT5.958e-6259.8940S ribosomal protein S0 OS=Nannizzia otae (strain... [more]
RSSA_TOXGO1.733e-6160.5140S ribosomal protein SA OS=Toxoplasma gondii PE=2... [more]

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Properties
Property NameValue
Genbank descriptionwca07g03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07g03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135197 ID=DN135197; Name=DN135197; organism=Citrus sinensis; type=EST; length=687bp
GGGGATCCAGCCAGCGAGCAGAAGTCTCCGTCGGTACCACGNGTCTCAGC
TTTCTCTCGCAGGTTTTGAGAAATAAAGATGGCGACCGGAACAGCAACGG
CCCCGAGGCAGCTCTCTCAGAAAGAGGCTGACATTCAGATGATGTTAGCC
GCCGAAGTTCATTTGGGTACTAAGAACTGTGACTTCCAAATGGAACGTTA
CGTGTTCAAGCGCCGAAACGATGGAATTTATATTATCAATCTTGGCAAGA
CTTGGGAGAAGCTACAGATGGCGGCCAGGGTTATCGTAGCCATTGAAAAC
CCTGGGGACATTATTGTCCAATCAGCTAGACCCTATGGACAGCGAGCTGT
GTTGAAGTTTGCAAAGTACACTCACGCCCATGCCATTGCTGGCAGACACA
CTCCTGGTACATTTACCAATCAAATGCAAACATCATTCAATGAGCCCCGA
CTTCTCATTCTAACAGATCCACGAACAGACCATCAGCCAATTAAGGAAGC
TGCTCTTGGAAACACTCCCACCATTGCCTTTTGTGACACTGACTCACCTA
TGCGTTATGTTGATATTGGCATTCCTGCCAATAACAAGGGCAAACACAGC
ATTGGGTGTCTCTTCTGGCTTTTGGCTAGAATGGTTCTCCAGATGCGCGG
CACTATTCGTCCTGGCCACAAGTGGGATGTGATGGTC
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