DN135189

Overview
NameDN135189
Unique NameDN135189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10427 contig Csv1_Contig10427:67..696. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21
Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 3
Query:  354 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDL 623
            L NY+D +YFG IGIGTP Q FTVIFDTGSSNLWVPS  C  S AC  H+++    SSTY+   ++  I YGTG+++G    D V++G +
Sbjct:   67 LVNYLDMEYFGTIGIGTPAQEFTVIFDTGSSNLWVPSIYC-SSPACTNHNRFNPQESSTYQATSQTLSIAYGTGSMTGILGYDTVQVGGI 155          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.247e-20
Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 3
Query:  354 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDL 623
            L NYMD +YFG I IGTPPQ FTVIFDTGSSNLWVPS  C  S AC  H+++   +SST+K   ++  I YGTG+++G    D V++  +
Sbjct:   67 LVNYMDMEYFGTISIGTPPQEFTVIFDTGSSNLWVPSIYC-SSPACSNHNRFDPQKSSTFKPTSQTVSIAYGTGSMTGVLGYDTVQVAGI 155          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PEP2B_GADMO (Pepsin-2B OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.247e-20
Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 3
Query:  354 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIG 617
            +KN  D +Y+G I IGTPP++F VIFDTGSSNLWV SS C  + AC  H+K++  +SSTY + GK+ D+ YGTG + G   +D V +G
Sbjct:    6 MKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHC-SAQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMRGILGQDTVSVG 92          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: CATE_RAT (Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 4.737e-20
Identity = 48/92 (52.17%), Postives = 59/92 (64.13%), Query Frame = 3
Query:  354 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            L NY+D +YFG + IG+P QNFTVIFDTGSSNLWVPS  C  S AC  H  +   +SSTY + G    I YGTG+++G    D V +  L V
Sbjct:   72 LINYLDMEYFGTVSIGSPSQNFTVIFDTGSSNLWVPSVYC-TSPACKAHPVFHPSQSSTYMEVGNHFSIQYGTGSLTGIIGADQVSVEGLTV 162          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PEPC_MONDO (Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20
Identity = 45/92 (48.91%), Postives = 65/92 (70.65%), Query Frame = 3
Query:  354 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            + NY+D+ YFGEI IGTPPQNF V+FDTGSSNLWVPS+ C  S AC  H+++   +SST+   G++  + YG+G+++     D V + ++VV
Sbjct:   67 ITNYLDSFYFGEISIGTPPQNFLVLFDTGSSNLWVPSTYCQ-SQACSNHNRFSPSQSSTFTNGGQTYTLSYGSGSLTVVLGYDTVTVQNIVV 157          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PEPB_CANFA (Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20
Identity = 44/90 (48.89%), Postives = 64/90 (71.11%), Query Frame = 3
Query:  360 NYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            NY+D+ YFGEI IGTPPQNF ++FDTGSSNLWVPS+ C  S AC  H+++   RSSTY+ + ++  + YG G+++     D V + ++V+
Sbjct:   68 NYLDSYYFGEISIGTPPQNFLILFDTGSSNLWVPSTYCQ-SQACSNHNRFNPSRSSTYQSSEQTYTLAYGFGSLTVLLGYDTVTVQNIVI 156          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PEPA_CHICK (Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.351e-19
Identity = 47/92 (51.09%), Postives = 60/92 (65.22%), Query Frame = 3
Query:  354 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            + NYMDA Y+G I IGTP Q+F+VIFDTGSSNLWVPS  C  S AC  H ++   +SSTY    ++  I YGTG++SG    D V +  + V
Sbjct:   51 MTNYMDASYYGTISIGTPQQDFSVIFDTGSSNLWVPSIYCK-SSACSNHKRFDPSKSSTYVSTNETVYIAYGTGSMSGILGYDTVAVSSIDV 141          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.351e-19
Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 3
Query:  336 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYF-SIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIG 617
            DA    L +Y +AQY+G + IGTPPQNF V+FDTGSSNLWVP + C F  IAC  H+++   +SS+    G S +I YGTG++ G    D V  G
Sbjct:   55 DAFNEGLSDYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCTATGASFEIQYGTGSMKGTVDNDVVCFG 149          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PEPC_RABIT (Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.070e-19
Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = 3
Query:  360 NYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            +Y+DA YFGEI IGTP QNF V+FDTGSSNLWVPS  C  S AC  H+++   +SST+    ++  + YG+G+++GFF  D   I ++ V
Sbjct:   67 DYLDAAYFGEISIGTPSQNFLVLFDTGSSNLWVPSVYCQ-SEACTTHNRFNPSKSSTFYTYDQTFSLEYGSGSLTGFFGYDTFTIQNIEV 155          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PAG_HORSE (Pregnancy-associated glycoprotein OS=Equus caballus GN=PAG PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.010e-19
Identity = 53/129 (41.09%), Postives = 75/129 (58.14%), Query Frame = 3
Query:  255 RLDSKEGESFRTSIRKYSLRGN---LGESGDADIV--ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLV 626
            R + +E +  +  + KY  R     L +  D+ +    ++NY+D  Y G I +GTPPQ F VIFDTGS++LWVPS  C  S AC  H+ +   RSST+  +G+   + YGTG +SGF   D +KI  LV
Sbjct:   28 RENLREKDMLKEYLEKYPFRLTHKLLHKHADSGVAFEPMRNYLDIAYMGIISVGTPPQEFQVIFDTGSADLWVPSIYC-SSPACSNHNTFNPLRSSTFVASGQPIKLIYGTGKMSGFVGYDTIKISSLV 155          
The following BLAST results are available for this feature:
BLAST of DN135189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
PEPA_CALJA9.545e-2153.33Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
PEPA_SORUN1.247e-2053.33Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1[more]
PEP2B_GADMO1.247e-2052.27Pepsin-2B OS=Gadus morhua PE=1 SV=1[more]
CATE_RAT4.737e-2052.17Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3[more]
PEPC_MONDO6.187e-2048.91Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV... [more]
PEPB_CANFA6.187e-2048.89Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1[more]
PEPA_CHICK2.351e-1951.09Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1[more]
ASP3_CAEEL2.351e-1949.47Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]
PEPC_RABIT3.070e-1950.00Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV... [more]
PAG_HORSE4.010e-1941.09Pregnancy-associated glycoprotein OS=Equus caballu... [more]

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Properties
Property NameValue
Genbank descriptionwca07e11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07e11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135189 ID=DN135189; Name=DN135189; organism=Citrus sinensis; type=EST; length=630bp
GGGGATAGAGAATTTNNNNNTTCTATTTAAAATATCTAACATCCTTTCGA
TTATCTCTGCTCACAAGCATTTCTCTGTATCGATCATCGAAAGAGACTTT
ACTTGTCAACATGGGAACGGTATTCAAATCTATTACAGCCGGTTTCTTCC
TTTGTTTGCTTCTGTTTCCTGTGGTGTTCTCGACACCAAACGGTGGGTTA
TACAGAATCGGACTTAAAAAGAGGAAGTTTGACCTGAACAACAGAGTGGC
TGCCCGCCTTGACTCCAAGGAAGGAGAGTCATTCAGAACTTCTATCAGAA
AATATTCTCTTCGTGGAAACTTAGGAGAGTCAGGGGATGCTGATATTGTT
GCGCTGAAGAACTACATGGATGCTCAGTACTTTGGTGAGATTGGTATTGG
CACACCCCCGCAAAATTTCACTGTGATATTTGACACTGGTAGTTCAAATT
TGTGGGTGCCCTCTTCTAAGTGTTATTTCTCGATTGCATGCTATTTCCAT
TCCAAGTACAGGTCAGGCCGCTCAAGTACCTACAAGAAGAATGGTAAATC
GGCTGATATCCATTATGGAACTGGAGCTATTTCTGGTTTTTTTAGTGAAG
ACCATGTCAAAATCGGTGATCTTGTGGTCA
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