DN135189

Overview
NameDN135189
Unique NameDN135189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PLM1_PLAFA (Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.990e-18
Identity = 48/114 (42.11%), Postives = 70/114 (61.40%), Query Frame = 3
Query:  282 FRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDL 623
            F+T + +    GN G+S     V L +  +  Y+GE  IG   Q F  IFDTGS+NLWVPS++C  +I C   + Y S +S TY+K+G   +++Y +G +SGFFS+D V I +L
Sbjct:  112 FKTGLTQKPHLGNAGDS-----VTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSKDIVTIANL 219          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PLM1_PLAF7 (Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0076 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.990e-18
Identity = 48/114 (42.11%), Postives = 70/114 (61.40%), Query Frame = 3
Query:  282 FRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDL 623
            F+T + +    GN G+S     V L +  +  Y+GE  IG   Q F  IFDTGS+NLWVPS++C  +I C   + Y S +S TY+K+G   +++Y +G +SGFFS+D V I +L
Sbjct:  112 FKTGLTQKPHLGNAGDS-----VTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSKDIVTIANL 219          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PEPAF_RABIT (Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.685e-17
Identity = 46/97 (47.42%), Postives = 61/97 (62.89%), Query Frame = 3
Query:  336 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLV 626
            D     L+NY+D  Y G I IGTPPQ F V+ DTGS++LWVPS  C  S AC  H+ +    SST+  +G+  +I YG+G +SGF + D V+I  LV
Sbjct:   60 DVSFEPLRNYLDLAYIGIISIGTPPQEFKVVLDTGSADLWVPSIYC-SSPACGKHNTFNPLLSSTFLVSGRPINIVYGSGRMSGFLAYDTVQIAGLV 155          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PAG1_PIG (Pregnancy-associated glycoprotein 1 OS=Sus scrofa GN=PAG1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.753e-17
Identity = 47/108 (43.52%), Postives = 68/108 (62.96%), Query Frame = 3
Query:  294 IRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIG 617
            I+K+ L+G+L  S     + L NY+D  Y G I IGTPPQ F+VIFDT SS+LWVPS++C+ S AC  H  +    SST++ + ++  +   +G +SG    D V+IG
Sbjct:   49 IQKFGLKGSLC-SPKISCLRLWNYLDMVYVGNITIGTPPQLFSVIFDTASSDLWVPSNQCH-SRACVTHRSFNPTLSSTFQSSNRTVKLAPHSGLVSGLLGYDTVQIG 154          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PAG1_BOVIN (Pregnancy-associated glycoprotein 1 OS=Bos taurus GN=PAG1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.402e-17
Identity = 45/91 (49.45%), Postives = 58/91 (63.74%), Query Frame = 3
Query:  354 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLV 626
            L+N  D  Y G I IGTPPQ F V+FDT SS+LWVPS  C  S AC  H ++R  +SST++   K+  I YG+G + G    D V+IG+LV
Sbjct:   63 LRNIKDLVYMGNITIGTPPQEFQVVFDTASSDLWVPSDFC-TSPACSTHVRFRHLQSSTFRLTNKTFRITYGSGRMKGVVVHDTVRIGNLV 152          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: CARDF_CYNCA (Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.402e-17
Identity = 54/101 (53.47%), Postives = 58/101 (57.43%), Query Frame = 3
Query:  327 ESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVV 629
            +SG A +VAL N  D  Y+GEIGIGTPPQ FTVIFDTGSS LWVPSSK         HS Y S  SSTYK                   S+D V IGDLVV
Sbjct:    2 DSGSA-VVALTNDRDTSYYGEIGIGTPPQKFTVIFDTGSSVLWVPSSKA--------HSMYESSGSSTYK-------------------SQDSVTIGDLVV 74          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PAG1_SHEEP (Pregnancy-associated glycoprotein 1 OS=Ovis aries GN=PAG1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 51/133 (38.35%), Postives = 71/133 (53.38%), Query Frame = 3
Query:  243 RVAARLDSKEGESFRTSIRK---YSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSI--ACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLV 626
            RV    ++  G+    S  K   Y L      + +  I  L+N MD  Y G I IGTPPQ F V+FDTGSS+L VPS  C       C    K++  +SST++    +  I++G+G + GF + D V+IGDLV
Sbjct:   23 RVKTMRNTLSGKKMLNSFLKEHAYRLSQISFRASNLTIHPLRNIMDMLYVGNITIGTPPQEFQVVFDTGSSDLLVPSINCLSPTKRPCSKQDKFKHHQSSTFRFTNDTFRIYFGSGTMRGFVAHDTVRIGDLV 155          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: PLM2_PLAFA (Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16
Identity = 42/101 (41.58%), Postives = 63/101 (62.38%), Query Frame = 3
Query:  321 LGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDL 623
            LG S D   + L ++ +  ++G+  +G   Q FT I DTGS+NLWVPS KC  +  C     Y S +S TY+K+G   +++Y +G +SGFFS+D V +G+L
Sbjct:  123 LGSSNDN--IELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKC-TTAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSGTVSGFFSKDLVTVGNL 220          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16
Identity = 46/71 (64.79%), Postives = 49/71 (69.01%), Query Frame = 3
Query:  327 ESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKK 539
            +SG A +VAL N  D  YFGEIGIGTPPQ FTVIFDTGSS LWVPSSK         HS Y S  SSTYK+
Sbjct:    1 DSGSA-VVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKA--------HSMYESSGSSTYKE 62          
BLAST of DN135189 vs. ExPASy Swiss-Prot
Match: ASP6_CAEEL (Aspartic protease 6 OS=Caenorhabditis elegans GN=asp-6 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 41/88 (46.59%), Postives = 53/88 (60.23%), Query Frame = 3
Query:  354 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIG 617
            + ++ D +Y G I IGTP Q F V+ DTGSSNLW+P   C     C   SK+ S  SST+ KNGKS  I YG+G  +G   +D V+ G
Sbjct:   63 VNDFGDFEYLGNITIGTPDQGFIVVLDTGSSNLWIPGPTC--KTNCKTKSKFDSTASSTFVKNGKSWTIQYGSGDAAGILGQDTVRFG 148          
The following BLAST results are available for this feature:
BLAST of DN135189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
PLM1_PLAFA1.990e-1842.11Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2[more]
PLM1_PLAF71.990e-1842.11Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7... [more]
PEPAF_RABIT1.685e-1747.42Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1[more]
PAG1_PIG3.753e-1743.52Pregnancy-associated glycoprotein 1 OS=Sus scrofa ... [more]
PAG1_BOVIN6.402e-1749.45Pregnancy-associated glycoprotein 1 OS=Bos taurus ... [more]
CARDF_CYNCA6.402e-1753.47Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 ... [more]
PAG1_SHEEP3.177e-1638.35Pregnancy-associated glycoprotein 1 OS=Ovis aries ... [more]
PLM2_PLAFA5.420e-1641.58Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1[more]
CARDH_CYNCA5.420e-1664.79Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]
ASP6_CAEEL9.245e-1646.59Aspartic protease 6 OS=Caenorhabditis elegans GN=a... [more]

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Properties
Property NameValue
Genbank descriptionwca07e11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07e11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135189 ID=DN135189; Name=DN135189; organism=Citrus sinensis; type=EST; length=630bp
GGGGATAGAGAATTTNNNNNTTCTATTTAAAATATCTAACATCCTTTCGA
TTATCTCTGCTCACAAGCATTTCTCTGTATCGATCATCGAAAGAGACTTT
ACTTGTCAACATGGGAACGGTATTCAAATCTATTACAGCCGGTTTCTTCC
TTTGTTTGCTTCTGTTTCCTGTGGTGTTCTCGACACCAAACGGTGGGTTA
TACAGAATCGGACTTAAAAAGAGGAAGTTTGACCTGAACAACAGAGTGGC
TGCCCGCCTTGACTCCAAGGAAGGAGAGTCATTCAGAACTTCTATCAGAA
AATATTCTCTTCGTGGAAACTTAGGAGAGTCAGGGGATGCTGATATTGTT
GCGCTGAAGAACTACATGGATGCTCAGTACTTTGGTGAGATTGGTATTGG
CACACCCCCGCAAAATTTCACTGTGATATTTGACACTGGTAGTTCAAATT
TGTGGGTGCCCTCTTCTAAGTGTTATTTCTCGATTGCATGCTATTTCCAT
TCCAAGTACAGGTCAGGCCGCTCAAGTACCTACAAGAAGAATGGTAAATC
GGCTGATATCCATTATGGAACTGGAGCTATTTCTGGTTTTTTTAGTGAAG
ACCATGTCAAAATCGGTGATCTTGTGGTCA
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