DN135173

Overview
NameDN135173
Unique NameDN135173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2079 contig Csv1_Contig2079:301..963. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: PTGR1_PIG (Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.507e-38
Identity = 88/184 (47.83%), Postives = 114/184 (61.96%), Query Frame = 1
Query:    7 VAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTAPQL--LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP 552
            VA+  +S +  +    +V    GW  +S+     L  L+      +PLS   G +GMPG+TAY GL ++C  K GE V V+AA+GAVG +VGQ AKL GC VVG+AGS EKV  LK K+GFD AFNYK    L+  LK+  P+G D YF+NVGG+  +AV   M+  GRIA+CG IS YN   P
Sbjct:   68 VARVIESKNAAFPTGTIVVALLGWTTHSISDGKNLERLLAEWPDTLPLSLTLGTVGMPGLTAYFGLLDICGLKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVACLK-KYGFDVAFNYKTIESLEETLKKASPEGYDCYFDNVGGEFSNAVTSQMKKFGRIAICGAISTYNRTGP 250          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: PTGR1_HUMAN (Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 3.275e-38
Identity = 93/205 (45.37%), Postives = 121/205 (59.02%), Query Frame = 1
Query:    7 VAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTAPQL--LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP-EGVHNLEQLIGKRIRLEGFL 612
            VAK  +S +    K  +V  S GW  +S+     L  L+      +PLS   G +GMPG+TAY GL E+C  K GE V V+AA+GAVG +VGQ AKL GC VVG+ GS EKV  L+ K GFD  FNYK    L+  LK+  P G D YF+NVGG+  + V+  M+  GRIA+CG IS YN   P       E +I + +R+E F+
Sbjct:   68 VAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFV 271          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: PTGR2_BOVIN (Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.396e-27
Identity = 74/189 (39.15%), Postives = 102/189 (53.97%), Query Frame = 1
Query:    1 GGVAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTAPQLLIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKG--EYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP 552
            GGV    +S H N+ K D V       +  ++    +L K+  Q  D  LSY+ G +GMPG+T+  G+ E      G  + + VS A+GA G L GQ  +L GC  VVG  G+ EK   L ++ GFD A NYK+    +   K C P G+D+YF+NVGG + D V+  M     I +CG ISQYN + P
Sbjct:   77 GGVGIIEESKHTNFMKGDFVTSFYWPWQTKVILDGNILEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHITAGSNQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGTPEKCLFLTSELGFDAAINYKEGNVAEQLHKLC-PAGVDVYFDNVGGDISDTVISQMNQNSHIILCGQISQYNKDVP 264          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: PTGR2_PONAB (Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.875e-26
Identity = 72/189 (38.10%), Postives = 101/189 (53.44%), Query Frame = 1
Query:    1 GGVAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTAPQLLIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKG--EYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP 552
            GG+    +S H N  K D V       +  ++     L K+  Q  D  LSY+ G +GMPG+T+  G+ E      G  + + VS A+GA G + GQ   L GC  VVG  G+ EK  LL ++ GFD A NYK++   +   + C P G+D+YF+NVGG + D V+  M     I +CG ISQYN + P
Sbjct:   77 GGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHLLGCSRVVGICGTHEKCVLLTSELGFDAAINYKKDNVAEQLRESC-PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVP 264          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: PTGR2_HUMAN (Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.366e-26
Identity = 71/189 (37.57%), Postives = 100/189 (52.91%), Query Frame = 1
Query:    1 GGVAKXXDSTHPNYAKDDLVWGSTGWEEYSLVTAPQLLIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKG--EYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP 552
            GG+    +S H N  K D V       +  ++     L K+  Q  D  LSY+ G +GMPG+T+  G+ E      G  + + VS A+GA G + GQ     GC  VVG  G+ EK  LL ++ GFD A NYK++   +   + C P G+D+YF+NVGG + D V+  M     I +CG ISQYN + P
Sbjct:   77 GGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESC-PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVP 264          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: PTGR2_RAT (Prostaglandin reductase 2 OS=Rattus norvegicus GN=Ptgr2 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25
Identity = 72/189 (38.10%), Postives = 101/189 (53.44%), Query Frame = 1
Query:    1 GGVAKXXDSTHPNYAKDDLVWGSTG-WEEYSLVTAPQL-LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP 552
            GG+    +S H   AK D V      W+  +++    L  +  Q  D  LSY+ G +GMPG+T+  G+ E    S    + + VS A+GA G L GQ   L GC  VVG  G+ EK   L ++ GFD A NYK   ++   L+   P G+D+YF+NVGG + +AV+  M     I +CG ISQYN + P
Sbjct:   77 GGLGVIEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHVSAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTHEKCLFLTSELGFDAAVNYKTG-NVAEQLREACPDGVDVYFDNVGGDISNAVISQMNQNSHIILCGQISQYNKDVP 264          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: PTGR2_MOUSE (Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.691e-24
Identity = 70/189 (37.04%), Postives = 101/189 (53.44%), Query Frame = 1
Query:    1 GGVAKXXDSTHPNYAKDDLVWGSTG-WEEYSLVTAPQL-LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP 552
            GG+    +S H    K D V      W+  +++    L  +  Q  D  LSY+ G +GMPG+T+  G+ E    S    + + VS A+GA G L GQ   L GC  VVG  G++EK   L ++ GFD A NYK   ++   L+   P G+D+YF+NVGG + +AV+  M     I +CG ISQY+ + P
Sbjct:   77 GGIGVVEESKHQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTG-NVAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVP 264          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: ZADH2_MOUSE (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Mus musculus GN=Zadh2 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.477e-22
Identity = 68/199 (34.17%), Postives = 107/199 (53.77%), Query Frame = 1
Query:   82 EYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLE------QLIGKRIRLEGFLAGDYYHLYPKFLELVI 660
            EY++V A    I I    V   Y T ++   G TAY  L E+    +G+ V V+AA+G  GQ   Q +K+A C+V+G+  S EK   LK+  G D   NY+ EP ++  LK+ +P+G+D+ +E+VGG M D  +  +  +GR+ V G IS Y  + P G+  ++      +L+ K   L GF    Y+  Y   +E ++
Sbjct:  131 EYTVVPAS---IAIPMPSVKPEYLTMLVS--GTTAYLSLEELGELSEGKKVLVTAAAGGTGQFAVQLSKIAKCHVIGTCSSDEKAAFLKS-IGCDRPINYRTEP-VETVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QSPTGLSPIKAGVLPTKLLKKSASLRGFFLNHYFSKYQAAMERLL 320          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: ZADH2_HUMAN (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Homo sapiens GN=ZADH2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.021e-20
Identity = 64/186 (34.41%), Postives = 98/186 (52.69%), Query Frame = 1
Query:  124 QHTDVPLSYYTGI---------LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLE------QLIGKRIRLEGFLAGDYYHLY 636
            ++T VP S  T +         L + G TAY  L E+    +G+ V V+AA+G  GQ   Q +K A C+V+G+  S EK   LK+  G D   NYK EP +   LK+ +P+G+D+ +E+VGG M D  +  +  +GR+ V G IS Y  + P G+  ++      +L+ K   ++GF    Y   Y
Sbjct:  131 EYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKY 312          
BLAST of DN135173 vs. ExPASy Swiss-Prot
Match: ZADH2_BOVIN (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Bos taurus GN=ZADH2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.207e-18
Identity = 56/156 (35.90%), Postives = 85/156 (54.49%), Query Frame = 1
Query:  175 GVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKQEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLE------QLIGKRIRLEGFLAGDY 624
            G TAY  L E+    +G+ V V+AA+G  GQ   Q AK A C+V+G+  S EK   LK+  G D   NY  E  +   L++ +PQG+D+ +E+VGG M D  +  +  RGR+ V G +S Y  + P G+  ++      +L+ K   ++GF    Y
Sbjct:  157 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIGTCSSAEKSAFLKS-VGCDRPINYNTE-HVGTVLRQEYPQGVDVVYESVGGAMFDLAVDALATRGRLIVIGFVSGY--QTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHY 308          
The following BLAST results are available for this feature:
BLAST of DN135173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PTGR1_PIG2.507e-3847.83Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 P... [more]
PTGR1_HUMAN3.275e-3845.37Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1... [more]
PTGR2_BOVIN3.396e-2739.15Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 P... [more]
PTGR2_PONAB2.875e-2638.10Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2... [more]
PTGR2_HUMAN8.366e-2637.57Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2... [more]
PTGR2_RAT2.434e-2538.10Prostaglandin reductase 2 OS=Rattus norvegicus GN=... [more]
PTGR2_MOUSE2.691e-2437.04Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2... [more]
ZADH2_MOUSE1.477e-2234.17Zinc-binding alcohol dehydrogenase domain-containi... [more]
ZADH2_HUMAN4.021e-2034.41Zinc-binding alcohol dehydrogenase domain-containi... [more]
ZADH2_BOVIN2.207e-1835.90Zinc-binding alcohol dehydrogenase domain-containi... [more]

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Properties
Property NameValue
Genbank descriptionwca07c11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07c11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135173 ID=DN135173; Name=DN135173; organism=Citrus sinensis; type=EST; length=663bp
GGGGGGGTAGCTAAAGNNNNGGATTCTACACATCCAAATTATGCAAAAGA
TGACTTGGTTTGGGGCTCCACCGGGTGGGAGGAGTACAGTCTCGTTACAG
CCCCACAGCTTTTGATTAAAATTCAGCATACAGATGTGCCCCTTTCATAC
TATACTGGAATCCTTGGTATGCCTGGTGTGACTGCATACGCTGGTTTATA
CGAAGTTTGCTCTCCGAAGAAAGGTGAGTACGTCTATGTATCTGCAGCAT
CTGGAGCTGTTGGTCAGCTTGTTGGCCAATTTGCAAAATTGGCTGGTTGC
TATGTTGTTGGAAGTGCTGGAAGCAAAGAAAAGGTCGATTTGTTGAAGAA
CAAGTTTGGATTTGATGATGCTTTTAACTACAAGCAAGAGCCAGACTTGG
ATGCAGCACTCAAAAGATGCTTCCCTCAAGGAATCGACATATATTTCGAA
AACGTTGGGGGAAAGATGCTGGACGCAGTGCTACTCAACATGAGGCTCCG
GGGCCGCATTGCGGTATGCGGTATGATCTCGCAGTACAACCTGGAAAAAC
CTGAAGGCGTACACAACTTAGAGCAACTGATCGGGAAACGGATTCGCCTG
GAAGGATTTCTAGCTGGTGATTACTATCACCTCTATCCGAAATTCTTGGA
ACTGGTCATTCCT
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