DN135157

Overview
NameDN135157
Unique NameDN135157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length546
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13665 contig Csv1_Contig13665:1..527. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.171e-17
Identity = 45/131 (34.35%), Postives = 71/131 (54.20%), Query Frame = 3
Query:  147 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDXXGL 539
            KK+  I+ VGLD AGK+T+L  LK     T  PT     + +   +I F  +D+GG +  R LW  Y  N+ G++F+VDS D  R  E+R  L  +L+  +L    +L+ +NK D+  A++   +    G+
Sbjct:   18 KKKATIVFVGLDNAGKSTLLAMLKNSATTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGI 148          
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: ARL10_HUMAN (ADP-ribosylation factor-like protein 10 OS=Homo sapiens GN=ARL10 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.171e-17
Identity = 50/133 (37.59%), Postives = 76/133 (57.14%), Query Frame = 3
Query:  150 KEMRILMVGLDAAGKTTILYKLK-LGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDXXGLHS 545
            ++  +L++GLD AGK+T L  L     +   IPT GFN   +  K+    + ++GG   +R  W+ +      L+FVVDS DR R+  AR ELH++L++D   D  ++V ANKQDL  AM+  E+    GL +
Sbjct:   76 EQREVLVLGLDGAGKSTFLRVLSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWARQELHKLLDKDP--DLPVVVVANKQDLSEAMSMGELQRELGLQA 206          
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: ARLX_DICDI (ADP-ribosylation factor-like protein DDB_G0292332 OS=Dictyostelium discoideum GN=DDB_G0292332 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.796e-16
Identity = 51/141 (36.17%), Postives = 82/141 (58.16%), Query Frame = 3
Query:  111 LTFTK-LFSRLFAKKEMRILMVGLDAAGKTTILYKLK--LGEIVTT---------IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF-QNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDL 494
            ++F K LF  L  KK   ++++G++  GKTT+LY +     E +TT         IPT GFNVE++  + + F +WD+GG++  R  +RHY       +IFV DS+D + + E++ E   + N+  L++   L+ ANKQDL
Sbjct:    5 ISFIKNLFGFLTIKK---VMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDL 142          
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: ARL10_MOUSE (ADP-ribosylation factor-like protein 10 OS=Mus musculus GN=Arl10 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.911e-16
Identity = 46/131 (35.11%), Postives = 72/131 (54.96%), Query Frame = 3
Query:  150 KEMRILMVGLDAAGKTTILYKLK-LGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDXXGL 539
            ++  +L++GLD +GK+T L  L     +   +PT GFN   +  KN    + ++G    +R  W+ +      L+F+VDS DR R+  AR EL ++L+ D   D  +++ ANKQDL  AMN  E+    GL
Sbjct:   75 EQREVLVLGLDGSGKSTFLRMLAGKPPVEGHVPTWGFNSVRLPTKNFEVDLLEIGDSQNLRFYWKEFVNEVDVLVFMVDSTDRLRLPWARQELQKLLDRDP--DLPVVIVANKQDLSGAMNMVELQQELGL 203          
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: ARL9_HUMAN (ADP-ribosylation factor-like protein 9 OS=Homo sapiens GN=ARL9 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.776e-15
Identity = 46/132 (34.85%), Postives = 73/132 (55.30%), Query Frame = 3
Query:  147 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDXXGL 539
            +K  +IL++GLD AGKT++L+ L    +  ++ PT GF+   +  ++      ++GG    R  W  Y      LIFVVDS D  R+ EA+  LH+++  + +    L+VFANKQDL  A +  +I +   L
Sbjct:   16 EKNKQILVLGLDGAGKTSVLHSLASNRVQHSVAPTQGFHAVCINTEDSQMEFLEIGGSKPFRSYWEMYLSKGLLLIFVVDSADHSRLPEAKKYLHQLIAANPV--LPLVVFANKQDLEAAYHITDIHEALAL 145          
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: SAR1_TOBAC (GTP-binding protein SAR1 OS=Nicotiana tabacum GN=SAR1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.204e-12
Identity = 36/98 (36.73%), Postives = 58/98 (59.18%), Query Frame = 3
Query:  147 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLN 440
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W+ Y+     ++++VDS D++R  E++ EL  +L+
Sbjct:   18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDSFDKERFAESKKELDALLS 115          
BLAST of DN135157 vs. ExPASy Swiss-Prot
Match: SAR1_ENCCU (Small COPII coat GTPase SAR1 OS=Encephalitozoon cuniculi GN=SAR1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.204e-12
Identity = 44/126 (34.92%), Postives = 66/126 (52.38%), Query Frame = 3
Query:  117 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDL 494
            F      LF K    IL +G+D AGKTT++ KLK       +PT   +   +E  N+   V D+GG    R  WR YF +  G++F+VD +D +R  E R+    +L+ +  + A ++V  NK DL
Sbjct:   24 FQNFVKSLFGKPSS-ILFLGIDNAGKTTLVNKLKSDSTDVYMPTHHPSTSYIEIGNLKAQVIDLGGHTAARLAWRDYFYDCHGIVFIVDVHDVERFQEVREAYETVLSLE--KRAPVVVLMNKIDL 146          
The following BLAST results are available for this feature:
BLAST of DN135157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
SAR1_GIALA6.171e-1734.35GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR... [more]
ARL10_HUMAN6.171e-1737.59ADP-ribosylation factor-like protein 10 OS=Homo sa... [more]
ARLX_DICDI1.796e-1636.17ADP-ribosylation factor-like protein DDB_G0292332 ... [more]
ARL10_MOUSE8.911e-1635.11ADP-ribosylation factor-like protein 10 OS=Mus mus... [more]
ARL9_HUMAN5.776e-1534.85ADP-ribosylation factor-like protein 9 OS=Homo sap... [more]
SAR1_TOBAC1.204e-1236.73GTP-binding protein SAR1 OS=Nicotiana tabacum GN=S... [more]
SAR1_ENCCU1.204e-1234.92Small COPII coat GTPase SAR1 OS=Encephalitozoon cu... [more]

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Properties
Property NameValue
Genbank descriptionwca07a08 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07a08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135157 ID=DN135157; Name=DN135157; organism=Citrus sinensis; type=EST; length=546bp
GGGGATAACATATTTCNNNNTTGTTGTTAAGCTAATAAGCNNNGTCCTCC
ACCCCCCCCCTCCGCTCTCTCTCGCGTTCTCTGAAGTGATCCCCAGCCGG
AAGAATGGGGCTGACTTTCACAAAGCTGTTCAGCCGGCTCTTTGCCAAGA
AAGAGATGCGAATTCTAATGGTTGGTCTTGATGCTGCTGGTAAGACCACT
ATCTTGTACAAGCTCAAGCTTGGAGAGATTGTCACCACAATTCCTACCAT
TGGGTTTAATGTGGAGACCGTTGAATATAAGAACATCAGTTTCACTGTGT
GGGATGTTGGTGGCCAGGACAAGATTCGTCCCTTGTGGAGGCATTATTTC
CAGAACACTCAAGGTCTCATTTTTGTTGTGGACAGCAATGACAGAGACCG
TATTGTAGAAGCAAGGGATGAATTGCATAGGATGTTGAATGAGGATGAGC
TGCGAGATGCAGTGTTGCTTGTATTTGCTAACAAACAGGATCTTCCAAAT
GCAATGAATGCTGCTGAGATTACTGATANNNNNGGCCTCCACTCCC
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