DN135151

Overview
NameDN135151
Unique NameDN135151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_ECHMU (Glyceraldehyde-3-phosphate dehydrogenase OS=Echinococcus multilocularis PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.822e-28
Identity = 67/144 (46.53%), Postives = 88/144 (61.11%), Query Frame = 2
Query:   86 KVKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 517
            K ++GINGFGRIGRLV R  +  + V +VAV DPFI  +YM YMFKYDS HG++K  ++KV D   L+     +TVF   +   +PW++ GAEY+VESTG+ T               VIISAPS D+    VGVN  +Y P +
Sbjct:    2 KPQVGINGFGRIGRLVLRAAVASNSVNVVAVNDPFIDLEYMVYMFKYDSAHGRYK-GDVKV-DGGKLVIDSHRITVFQEMSASAVPWSQAGAEYIVESTGINTTVEKASAHFQGGAKKVIISAPSADSSHVRVGVNHEKYDPSM 143          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_MESAU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mesocricetus auratus GN=GAPDH PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.301e-28
Identity = 66/134 (49.25%), Postives = 85/134 (63.43%), Query Frame = 2
Query:  116 RIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 517
            RIGRLV R       V++VA+ DPFI  +YM YMF+YDS HG++K   +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPMFV+GVN ++Y   L
Sbjct:    1 RIGRLVTRAAFTSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFKG-TVKAENGKLVING-KAITIFQERDPTNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHDKYDNSL 132          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_DICDI (Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyostelium discoideum GN=gpdA PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 6.924e-28
Identity = 62/140 (44.29%), Postives = 84/140 (60.00%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYK 508
            V IGINGFGRIGRLV R  L+  +  ++A+ +PF+   YM YMFKYDS HG++K     +  +   +     + VF  ++P  I W+  GAEY+VESTG+F                V+ISAPS DAPM+V+GVNE  Y+
Sbjct:    3 VPIGINGFGRIGRLVLRASLENPECRVLAINEPFMDVKYMVYMFKYDSTHGRFKGTVEDINGE--FVVNGNKIHVFAEKDPANIKWSSVGAEYIVESTGLFLSTEKAGVHLKGGAKKVVISAPSTDAPMYVMGVNEETYE 140          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_BOLED (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Boletus edulis GN=GPD PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.181e-27
Identity = 64/123 (52.03%), Postives = 79/123 (64.23%), Query Frame = 2
Query:  146 LQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPE 514
            L+  ++ + AV DPFI  DYM YMFKYDSVHG+++  E+  KD K ++ G K +TVF  R+P  IPW   GA+YVVESTGVFT               VIISAPS DAPMFV GVN + Y P+
Sbjct:    1 LENPEINITAVNDPFIDLDYMVYMFKYDSVHGRFEG-EVSTKDGKLVING-KAITVFAERDPANIPWGTVGAQYVVESTGVFTTIEKASAHLKGGAKKVIISAPSSDAPMFVCGVNLDAYDPK 121          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_SHEEP (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Ovis aries GN=GAPDH PE=2 SV=4)

HSP 1 Score: 122.094 bits (305), Expect = 1.542e-27
Identity = 65/133 (48.87%), Postives = 82/133 (61.65%), Query Frame = 2
Query:  119 IGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 517
            IGRLV R       V++VA+ DPFI   YM YMF+YDS HG++ H  +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPMFV+GVN  +Y   L
Sbjct:    1 IGRLVTRAAFNTGKVDIVAINDPFIDLHYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKKVIISAPSADAPMFVMGVNHEKYNNTL 131          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_AMAMU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Amanita muscaria GN=GPD PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.436e-27
Identity = 61/119 (51.26%), Postives = 79/119 (66.39%), Query Frame = 2
Query:  158 DVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPE 514
            D+++VA+ DPFI   YM YMFKYDSVHG++    ++ KD K L   +KP+TVF  R+P +IPW   GAEY+VESTGVFT               ++ISAPS DAPMFV GVN ++Y P+
Sbjct:    4 DLDVVAINDPFIDLAYMVYMFKYDSVHGRFSG-SVETKDGK-LWINQKPITVFRKRDPVQIPWGSAGAEYIVESTGVFTTTEKASAHLKGGAKKIVISAPSADAPMFVCGVNLDKYDPK 120          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P3_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhizomucor racemosus GN=GPD3 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.655e-27
Identity = 66/146 (45.21%), Postives = 87/146 (59.59%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 517
            M  +  GINGF           L+   V++VA+ DPFI  +YM YMFKYDS HG++K   ++ KD K ++ G + + V   R+P +IPW   GA+YV+ESTGVFT               VIISAPS DAPMFVVGVN ++Y  +L
Sbjct:    1 MSTINTGINGFRSHWPYCLACSLENPKVKVVAINDPFIDLEYMVYMFKYDSTHGRFKG-TVEHKDGKLVVNGHE-IAVHAERDPAQIPWGSHGADYVIESTGVFTTKDAASAHLKGGAKKVIISAPSADAPMFVVGVNLDKYTSDL 144          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P1_GIALA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giardia lamblia GN=GAP1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 9.998e-27
Identity = 64/141 (45.39%), Postives = 83/141 (58.87%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKP 511
            +++GINGFGRIGR+  R  L  D V++VA+ DPF   +YM YM KYD+VHG++    +   +D   + G K ++VF    PEEIPW +T  + V+E TG FT               VIISAPS DAPMFV G N   Y P
Sbjct:    3 IRLGINGFGRIGRMALRASLNIDGVQVVAINDPFTDCEYMEYMLKYDTVHGRF-DGTIAHSEDSITVNGNK-ISVFKSMKPEEIPWGKTQVDIVLECTGRFTTKKDAELHITGGCKRVIISAPSADAPMFVCGCNLETYDP 141          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P2_DROSU (Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragment) OS=Drosophila subobscura GN=Gapdh2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.705e-26
Identity = 65/134 (48.51%), Postives = 82/134 (61.19%), Query Frame = 2
Query:  116 RIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 517
            RIGRLV R  + +    +VAV DPFI  +YM Y+FK+DS HG++K     V +   L+   + +TVF  R+P  I WA  GAEYVVESTGVFT               V+ISAPS DAPMFV GVN + YKP++
Sbjct:    1 RIGRLVLRAAIDKG-ASVVAVNDPFIDVNYMVYLFKFDSTHGRFKG--TVVAEGGFLVVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIEKASTHLKGGAKKVVISAPSADAPMFVCGVNLDAYKPDM 131          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 3.799e-26
Identity = 69/144 (47.92%), Postives = 88/144 (61.11%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVAR-VILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENEYKPE 514
            +KIGINGFGRIGR+V R  I    D+E+VA+ D  +  DY+ YM KYDSVHG++   E+ V D  TL+   K + +  V++P E+ W E GA+ VVESTG+F                VI+SAPSK D PMFV GVN   YK E
Sbjct:    3 IKIGINGFGRIGRMVFRAAIANFKDIEVVAIND-LLEPDYLAYMLKYDSVHGRF-DGEVSV-DGNTLVVNGKKIRLTAVKDPAELKWGEVGADVVVESTGIFLTKEGAQKHIDAGAKKVIMSAPSKDDTPMFVYGVNHGTYKGE 143          
The following BLAST results are available for this feature:
BLAST of DN135151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 289
Match NameE-valueIdentityDescription
G3P_ECHMU1.822e-2846.53Glyceraldehyde-3-phosphate dehydrogenase OS=Echino... [more]
G3P_MESAU5.301e-2849.25Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_DICDI6.924e-2844.29Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyo... [more]
G3P_BOLED1.181e-2752.03Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_SHEEP1.542e-2748.87Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_AMAMU3.436e-2751.26Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P3_RHIRA7.655e-2745.21Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhiz... [more]
G3P1_GIALA9.998e-2745.39Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giar... [more]
G3P2_DROSU1.705e-2648.51Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragme... [more]
G3P_RALSO3.799e-2647.92Glyceraldehyde-3-phosphate dehydrogenase OS=Ralsto... [more]

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Properties
Property NameValue
Genbank descriptionwca07a02 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07a02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135151 ID=DN135151; Name=DN135151; organism=Citrus sinensis; type=EST; length=517bp
GGGGACCACNNNTGNNNNNCCTACTCTCTACAACTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTATTGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCAGCAAGGATGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACG
AGTACAAACCAGAGCTC
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