DN135151

Overview
NameDN135151
Unique NameDN135151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3PC_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.211e-56
Identity = 107/134 (79.85%), Postives = 113/134 (84.33%), Query Frame = 2
Query:  113 GRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPE 514
            GRIGRLVARV LQRDDVELVAV DPFI+TDYMTYMFKYDSVHGQWKHHELKVKD+KTLLFGEK V VFG+RNPEEIPWAE GA++VVESTGVFT               V+ISAPSKDAPMFVVGVNE EYKPE
Sbjct:    1 GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHHELKVKDEKTLLFGEKSVRVFGIRNPEEIPWAEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPE 134          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3PC_PETCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petroselinum crispum GN=GAPC PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 4.601e-56
Identity = 107/144 (74.31%), Postives = 116/144 (80.56%), Query Frame = 2
Query:   86 KVKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 517
            K+KIGINGFGRIGRLVARV L  DD+ELVAV DPFITT+YMTYMFKYDSVHGQWK  ELKVKD KTLLFG+KP+TVFGVRNPEE PW E GAEYVVESTGVFT               V+ISAPS +APMFVVGVNE EYK ++
Sbjct:    2 KMKIGINGFGRIGRLVARVALMSDDIELVAVNDPFITTEYMTYMFKYDSVHGQWKKDELKVKDSKTLLFGDKPLTVFGVRNPEEDPWGEAGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSGNAPMFVVGVNEKEYKKDI 145          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3PC_PHYPA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Physcomitrella patens GN=GAPC PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 5.099e-47
Identity = 89/143 (62.24%), Postives = 106/143 (74.13%), Query Frame = 2
Query:   86 KVKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPE 514
            K+K+GINGFGRIGRLVARV L+RDD+ELVA+ DPFIT +YMTYMFKYDS HGQWK  E+ +  +  L FG  PV V+  R+P EIPW + GA++VVESTGVFT               V+ISAPSKDAPMFV+GVNEN+Y  E
Sbjct:    6 KIKVGINGFGRIGRLVARVALERDDIELVAINDPFITPEYMTYMFKYDSTHGQWKKTEVTLHSEGHLTFGGNPVAVYACRDPSEIPWGKHGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVMGVNENKYSDE 148          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3PC_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Hordeum vulgare GN=GAPC PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.176e-43
Identity = 85/114 (74.56%), Postives = 89/114 (78.07%), Query Frame = 2
Query:  176 VIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 517
            V DPFITTDYMTYMFKYD+VHGQWKHHE+KVKD KTLLFGEK V VFG RNPEEIPWA  GAEYVVESTGVFT               VIISAPSKDAPMFV GVNE EYK ++
Sbjct:    1 VNDPFITTDYMTYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHIKGGAKKVIISAPSKDAPMFVCGVNEKEYKSDI 114          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.537e-38
Identity = 80/141 (56.74%), Postives = 99/141 (70.21%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPE 514
            K+GINGFGRIGR+V R  L+  D+++VA+ DPFI  DYM YMFKYDS HG++K  +++ KD K ++ G KP++VFG R+P  IPW + GA+YVVESTGVFT               VIISAPS DAPMFV GVN   YKPE
Sbjct:    4 KVGINGFGRIGRIVLRNALEHGDIDVVAINDPFIDLDYMVYMFKYDSTHGRFKG-KVETKDGKLVIEG-KPISVFGERDPAAIPWGKAGADYVVESTGVFTTIEKASLHLKGGAKKVIISAPSADAPMFVCGVNLEAYKPE 142          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3PC_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Gracilaria verrucosa GN=GAPC PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.537e-38
Identity = 78/142 (54.93%), Postives = 102/142 (71.83%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 517
            ++GINGFGRIGRLV R  +++D + +VA+ DPFI  +YM YMFK+DS HG++    ++ KD K ++ G K +T++G R+P EIPWAE GA+YVVESTGVFT               VIISAPSKDAPMFV GVNE++Y P+L
Sbjct:    5 QVGINGFGRIGRLVLRAAIEKDTMSVVAINDPFIDLEYMAYMFKFDSTHGRYAG-SVETKDGKLIVNG-KSITIYGHRDPAEIPWAEAGADYVVESTGVFTLKEKAEKHFTGGAKKVIISAPSKDAPMFVCGVNEDKYTPDL 144          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_DEBHA (Glyceraldehyde-3-phosphate dehydrogenase OS=Debaryomyces hansenii GN=GPD PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 4.327e-38
Identity = 78/143 (54.55%), Postives = 99/143 (69.23%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 517
            + IGINGFGRIGRLV R+ LQR D+++VAV DPFI  +Y  YMFKYDS HG++K  E+  KDD  ++ G+  + VFG ++P  IPW + G +YV+ESTGVFT               VII+APS DAPMFVVGVNE +Y P+L
Sbjct:    3 ITIGINGFGRIGRLVLRIALQRSDIKVVAVNDPFIAPEYAAYMFKYDSTHGRYKG-EVTSKDDSLVIDGQS-IKVFGEKDPASIPWGKAGVDYVIESTGVFTTTEGAQKHIDGGAKKVIITAPSSDAPMFVVGVNEQKYTPDL 143          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_CRYNE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus neoformans GN=GPD PE=3 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 1.644e-37
Identity = 81/142 (57.04%), Postives = 96/142 (67.61%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPE 514
            VK+GINGFGRIGR+V R  ++  D+E+VAV DPFI  DYM YMFKYDS HG++K   ++VKD K L    K + VFG ++P  I W E GAEYVVESTGVFT               V+ISAPS DAPMFV GVN + YKPE
Sbjct:    3 VKVGINGFGRIGRIVLRNAIEHGDLEVVAVNDPFIDLDYMVYMFKYDSTHGRFKG-SVEVKDGK-LYINNKAIAVFGEKDPANIKWGEAGAEYVVESTGVFTTTEKAGVHLKGGAKKVVISAPSADAPMFVCGVNLDAYKPE 142          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_CANAL (Glyceraldehyde-3-phosphate dehydrogenase OS=Candida albicans GN=TDH1 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.644e-37
Identity = 80/143 (55.94%), Postives = 98/143 (68.53%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 517
            +KIGINGFGRIGRLV RV L R D+E+VAV DPFI  DY  YMFKYDS HG++K  E+    D  ++ G K + VF  R+P  IPW ++G +YV+ESTGVFT               VII+APS DAPMFVVGVNE++Y P+L
Sbjct:    3 IKIGINGFGRIGRLVLRVALGRKDIEVVAVNDPFIAPDYAAYMFKYDSTHGRYK-GEVTASGDDLVIDGHK-IKVFQERDPANIPWGKSGVDYVIESTGVFTKVEGAQKHIDAGAKKVIITAPSADAPMFVVGVNEDKYTPDL 143          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_OMPOL (Glyceraldehyde-3-phosphate dehydrogenase OS=Omphalotus olearius GN=GPD PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.804e-37
Identity = 81/141 (57.45%), Postives = 97/141 (68.79%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKP 511
            VK+GINGFGRIGRLV R  L+   VE+VAV DPFI  DYM YMFK+DSVHG++K   ++ KD K ++ G KP+ VFG R+P  IPW  +GA+YVVESTGVFT               VIISAPS DAPM+V GVN + Y P
Sbjct:    3 VKVGINGFGRIGRLVIRNALEAQGVEVVAVNDPFIPLDYMVYMFKFDSVHGRYKG-TVEAKDGKLIIAG-KPIAVFGERDPASIPWGASGADYVVESTGVFTTIDKASAHLKGGAKKVIISAPSADAPMYVCGVNLDAYDP 141          
The following BLAST results are available for this feature:
BLAST of DN135151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 289
Match NameE-valueIdentityDescription
G3PC_TOBAC1.211e-5679.85Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PETCR4.601e-5674.31Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PHYPA5.099e-4762.24Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_HORVU1.176e-4374.56Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_CRYCU2.537e-3856.74Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3PC_GRAVE2.537e-3854.93Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_DEBHA4.327e-3854.55Glyceraldehyde-3-phosphate dehydrogenase OS=Debary... [more]
G3P_CRYNE1.644e-3757.04Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3P_CANAL1.644e-3755.94Glyceraldehyde-3-phosphate dehydrogenase OS=Candid... [more]
G3P_OMPOL2.804e-3757.45Glyceraldehyde-3-phosphate dehydrogenase OS=Omphal... [more]

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Properties
Property NameValue
Genbank descriptionwca07a02 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07a02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135151 ID=DN135151; Name=DN135151; organism=Citrus sinensis; type=EST; length=517bp
GGGGACCACNNNTGNNNNNCCTACTCTCTACAACTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTATTGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCAGCAAGGATGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACG
AGTACAAACCAGAGCTC
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