DN135151

Overview
NameDN135151
Unique NameDN135151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P2_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhizomucor racemosus GN=GPD2 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.219e-32
Identity = 73/142 (51.41%), Postives = 94/142 (66.20%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 517
            ++GINGFGRIGR+V R  L   +V++VA+ DPFI  +YM YMFKYDSVHG+++   ++ KD K ++ G K ++VF  R+P +IPW    A YVVESTGVFT               VIISAPS DAPMFV GVN  +Y  +L
Sbjct:    4 QVGINGFGRIGRIVLRASLSNPEVQVVAINDPFIPLEYMVYMFKYDSVHGRFQ-GTVEAKDGKLVVNG-KEISVFSERDPAQIPWGSVEAAYVVESTGVFTSIDAASAHLQGGAKKVIISAPSGDAPMFVCGVNLEKYTSDL 143          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Bos taurus GN=GAPDH PE=1 SV=4)

HSP 1 Score: 138.658 bits (348), Expect = 1.592e-32
Identity = 72/143 (50.35%), Postives = 92/143 (64.34%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 517
            VK+G+NGFGRIGRLV R       V++VA+ DPFI   YM YMF+YDS HG++ +  +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPMFV+GVN  +Y   L
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYNNTL 142          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P1_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schizosaccharomyces pombe GN=tdh1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.592e-32
Identity = 70/140 (50.00%), Postives = 94/140 (67.14%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKP 511
            K+GINGFGRIGR+V R  L    +++VA+ DPFI  +YM YMFKYDS HG++    +++KD K ++ G   + V   R+P +I W+ +GA+YV+ESTGVFT               VIISAPSKDAPM+VVGVNE ++ P
Sbjct:    5 KVGINGFGRIGRIVLRNALVAKTIQVVAINDPFIDLEYMAYMFKYDSTHGRFDG-SVEIKDGKLVIDGNA-IDVHNERDPADIKWSTSGADYVIESTGVFTTQETASAHLKGGAKRVIISAPSKDAPMYVVGVNEEKFNP 142          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.080e-32
Identity = 75/143 (52.45%), Postives = 90/143 (62.94%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 517
            VK+GINGFGRIGR+V R  ++  +V +VAV DPFI T Y  YM KYDS HGQ+K   + V  +   + G K VT +  R+P  IPW + G EYVVESTGVFT               VIISAPS DAPMFV+GVNE  Y P +
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHGEVNVVAVNDPFIETHYAAYMLKYDSTHGQFKG-TIDVNSNGLTVNG-KAVTFYQERDPASIPWGKHGVEYVVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNEKTYDPSV 143          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3PT_DANRE (Glyceraldehyde 3-phosphate dehydrogenase, testis-specific OS=Danio rerio GN=gapdhs PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.716e-32
Identity = 71/144 (49.31%), Postives = 96/144 (66.67%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKP 511
            M ++ +GINGFGRIGRLV R  LQ+  +++ A+ DPFI   YM YMFKYDS HG++K  E+ ++D K ++ G+  ++VF    P EIPW + GA YVVESTGVF                V++SAPS DAPMFV+GVN+++Y P
Sbjct:    1 MSELCVGINGFGRIGRLVLRACLQKG-IKVTAINDPFIDLQYMVYMFKYDSTHGRYK-GEVHMEDGKLIVDGQ-AISVFQCMKPAEIPWGDAGALYVVESTGVFLSIEKASAHIQGGAKRVVVSAPSPDAPMFVMGVNQDKYDP 141          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P2_CAEBR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caenorhabditis briggsae GN=gpd-2 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.716e-32
Identity = 73/146 (50.00%), Postives = 93/146 (63.70%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE----KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEY 505
            M K  +GINGFGRIGRLV R  +++D V +VAV DPFI+ DYM Y+F+YDS HG++K   +K + D  ++  E      + V+  ++P EI W   GA+YVVESTGVFT               VIISAPS DAPMFVVGVN  +Y
Sbjct:    1 MSKPTVGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFK-GTVKHEGDYLIVANEGKSQHKIKVYNSKDPAEIQWGAAGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKY 145          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_CRYPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryphonectria parasitica PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 3.548e-32
Identity = 74/139 (53.24%), Postives = 87/139 (62.59%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEY 505
            VK+GINGFGRIGR+V R   +  DVE+VAV DPFI   Y  YM KYDS HG +K        D  L+ G K V  +  R+P  IPW+ETGA+Y+VESTGVFT               VIISAPS DAPM+V+GVNE  Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAHEHSDVEIVAVNDPFIEPHYAAYMLKYDSQHGNFKGDVTVEGSD--LVVGGKKVRFYTERDPAAIPWSETGADYIVESTGVFTTTEKAKAHLKGGAKKVIISAPSADAPMYVMGVNEKTY 139          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P1_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Trichoderma koningii GN=gpd1 PE=1 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 3.548e-32
Identity = 73/138 (52.90%), Postives = 92/138 (66.67%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEY 505
            K+GINGFGRIGR+V R  L+   VE+VA+ DPFI   Y  YMFKYDS HG++K  ++KV D K L+   K +  +  R+P  IPW ++GAEY+VESTGVFT               VIISAPS DAPM+V+GVNE+ Y
Sbjct:    4 KVGINGFGRIGRVVLRNALETGAVEVVALNDPFIEPHYAEYMFKYDSTHGRFKG-DIKV-DGKDLVIDGKRIKFYQERDPANIPWKDSGAEYIVESTGVFTTTEKASAHFKGGAKKVIISAPSADAPMYVMGVNEDTY 139          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_GLOMM (Glyceraldehyde-3-phosphate dehydrogenase OS=Glossina morsitans morsitans GN=Gapdh PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 4.633e-32
Identity = 75/142 (52.82%), Postives = 88/142 (61.97%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 517
            KIGINGFGRIGRLV R  L +   E+VAV DPFI  +YM Y+FKYDS HG++K       D   L+   K +TVF  R+P  I WA  GAEY+VESTGVFT               V+ISAPS DAPMFV GVN   Y P++
Sbjct:    3 KIGINGFGRIGRLVLRAALDKG-AEVVAVNDPFIDVNYMVYLFKYDSTHGRFKG--TVAADGGFLVVNGKKITVFCERDPTNINWASAGAEYIVESTGVFTTIDKASAHFKGGAKKVVISAPSADAPMFVCGVNLEAYSPDM 141          
BLAST of DN135151 vs. ExPASy Swiss-Prot
Match: G3P_ASPOR (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus oryzae GN=gpdA PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 4.633e-32
Identity = 72/146 (49.32%), Postives = 92/146 (63.01%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVIDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 517
            M   K+GINGFGRIGR+V R  +   DV++VAV DPFI T Y  YM KYDS HG+++   ++  D+  ++ G+K +  F  R+P  IPW   GA Y+VESTGVFT               VIISAPS DAPMFV+GVN  EYK ++
Sbjct:    1 MATPKVGINGFGRIGRIVFRNAIASGDVDVVAVNDPFIETHYAAYMLKYDSTHGRFQG-TIETYDEGLIVNGKK-IRFFAERDPAAIPWGSAGAAYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNKEYKTDI 144          
The following BLAST results are available for this feature:
BLAST of DN135151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 289
Match NameE-valueIdentityDescription
G3P2_RHIRA1.219e-3251.41Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhiz... [more]
G3P_BOVIN1.592e-3250.35Glyceraldehyde-3-phosphate dehydrogenase OS=Bos ta... [more]
G3P1_SCHPO1.592e-3250.00Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schi... [more]
G3P_AJECA2.080e-3252.45Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello... [more]
G3PT_DANRE2.716e-3249.31Glyceraldehyde 3-phosphate dehydrogenase, testis-s... [more]
G3P2_CAEBR2.716e-3250.00Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caen... [more]
G3P_CRYPA3.548e-3253.24Glyceraldehyde-3-phosphate dehydrogenase OS=Crypho... [more]
G3P1_TRIKO3.548e-3252.90Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Tric... [more]
G3P_GLOMM4.633e-3252.82Glyceraldehyde-3-phosphate dehydrogenase OS=Glossi... [more]
G3P_ASPOR4.633e-3249.32Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]

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Properties
Property NameValue
Genbank descriptionwca07a02 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07a02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135151 ID=DN135151; Name=DN135151; organism=Citrus sinensis; type=EST; length=517bp
GGGGACCACNNNTGNNNNNCCTACTCTCTACAACTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTATTGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCAGCAAGGATGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACG
AGTACAAACCAGAGCTC
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