DN135143

Overview
NameDN135143
Unique NameDN135143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2009 contig Csv1_Contig2009:1..666. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16
Identity = 48/118 (40.68%), Postives = 67/118 (56.78%), Query Frame = 2
Query:  158 GADDSADNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 511
            G+  S+    F +  R    +  A AG   D KE P ++VF  D+PGLK  ++KV V+D N+L IS            ++ R+ER  GKF+R+F LP+NA  E I A  ++GVLTVTV
Sbjct:   27 GSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTV 144          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.747e-16
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 2
Query:  200 TRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 511
            T    +D  A      D +E P ++VF  D+PGLK  ++KV VED N+L IS             + R+ER  GKFMR+F LPENA VE + A  ++GVL+VTV
Sbjct:   36 TNAPAKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTV 139          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.747e-16
Identity = 45/98 (45.92%), Postives = 60/98 (61.22%), Query Frame = 2
Query:  218 DAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 511
            +  A A T  D KE P ++VF  D+PGLK  ++KV VE+D VL IS             + R+ER  GKFMR+F LPENA ++ + A  ++GVLTVTV
Sbjct:   40 ETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTV 137          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = 2
Query:  215 RDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 511
            ++  A A T  D KE P ++VF  D+PGLK  ++KV VE+  VL IS            K+ R+E   GKF+R+F LPENANV+ + A  ++GVLTVTV
Sbjct:   44 KETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTV 142          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16
Identity = 46/105 (43.81%), Postives = 60/105 (57.14%), Query Frame = 2
Query:  197 PTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 511
            P      +  A A    D KE P ++VF  D+PG+K  ++KV VED NVL IS             + R+ER  G+FMRKF LPENA V+ + A  ++GVLTVTV
Sbjct:   41 PRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGVLTVTV 145          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.781e-15
Identity = 46/107 (42.99%), Postives = 61/107 (57.01%), Query Frame = 2
Query:  191 NAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 511
            NAP      D  A      D +E P ++VF  D+PGL+  ++KV VED N+L IS            K+ R+ER  GKF R+F LPENA +E I A  ++GVL+VTV
Sbjct:   38 NAPAM----DVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTV 140          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.181e-15
Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 2
Query:  215 RDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 511
            ++  A   T  D KE P ++VF  D+PGLK  ++KV +E+  VL IS            K+ R+ER  GKF+R+F LPENA V+ + A   +GV+TVTV
Sbjct:   42 KETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTV 140          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15
Identity = 43/98 (43.88%), Postives = 60/98 (61.22%), Query Frame = 2
Query:  218 DAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 511
            +  A A    D KE P ++VF  D+PG+K  ++KV VED NVL++S            K+ R+ER  GKF+R+F L E+A VE + A  ++GVLTVTV
Sbjct:   37 ETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTV 134          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HS186_ORYSJ (18.6 kDa class III heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.6 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.154e-14
Identity = 43/101 (42.57%), Postives = 59/101 (58.42%), Query Frame = 2
Query:  236 GTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLI-------SXXXXXXXXXXXAKYVRMERRVG--KFMRKFVLPENANVEAISAVCQDGVLTVTV 511
            G P D+ E P  Y F++D+PGL   DI+V +E+D VL++       +            KY+R+ERR     F RKF LPE+A+   ISA C++GVLTVTV
Sbjct:   54 GAPVDIMETPGEYAFVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNGKRKREEEEGECKYIRLERRASPRAFARKFRLPEDADTGGISARCENGVLTVTV 154          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14
Identity = 41/102 (40.20%), Postives = 65/102 (63.73%), Query Frame = 2
Query:  215 RDAKAMAGTPA--DVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVD 514
            +D  +MA +PA  D KE P  +V ++D+PGLK  +IKV VE++ VL +S             + R+ER  GKF R+F LP+N +++++ A  ++GVLT+T+D
Sbjct:   57 KDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLD 158          
The following BLAST results are available for this feature:
BLAST of DN135143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HS17A_ORYSJ2.104e-1640.6817.9 kDa class I heat shock protein OS=Oryza sativ... [more]
HSP17_ARATH2.747e-1643.2717.4 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP12_SOLPE2.747e-1645.9217.6 kDa class I heat shock protein OS=Solanum per... [more]
HSP12_DAUCA6.121e-1645.4518.0 kDa class I heat shock protein OS=Daucus caro... [more]
HSP11_CHERU7.994e-1643.8118.3 kDa class I heat shock protein OS=Chenopodium... [more]
HS17C_ARATH1.781e-1542.9917.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HSP11_DAUCA5.181e-1542.4217.8 kDa class I heat shock protein OS=Daucus caro... [more]
HS16B_WHEAT6.767e-1543.8816.9 kDa class I heat shock protein 2 OS=Triticum ... [more]
HS186_ORYSJ1.154e-1442.5718.6 kDa class III heat shock protein OS=Oryza sat... [more]
HSP41_SOYBN4.386e-1440.2022.0 kDa class IV heat shock protein OS=Glycine ma... [more]

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Properties
Property NameValue
Genbank descriptionwca06h05 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06h05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135143 ID=DN135143; Name=DN135143; organism=Citrus sinensis; type=EST; length=671bp
GCCGGGGGAACCAACAAAATACTTAACGAACGNNNGNNNNCTCATTTAGC
AGTAGCGAACATCAACAACAGCTAATACTCGCAAAAGAATGGATTTCAGA
ATCATGGGTTTGGACTCATCGCCACTCTTTTCAACTCTGCAGCACATGAT
GGAGATGGGGGCGGACGACTCCGCTGACAACAAGTCATTCAACGCGCCGA
CGCGCACGTACGTGAGAGACGCCAAGGCAATGGCGGGGACGCCTGCGGAC
GTAAAGGAGTATCCGAACTCGTACGTGTTCATCGTCGACATGCCCGGACT
GAAGTCGGGGGACATCAAGGTCCGAGTGGAGGACGACAATGTGCTGCTCA
TAAGCGGAGAGAGGAAGCGGGAGGAGGAGAAAGAGGGGGCCAAGTATGTG
AGAATGGAGAGGAGGGTCGGCAAGTTTATGAGGAAATTTGTGCTGCCTGA
GAATGCTAACGTTGAAGCCATTTCGGCTGTGTGTCAGGACGGAGTGTTGA
CTGTGACCGTCGATAAGCTGCCACCGCCGGAGCCCAAGAAGCCCAAGACC
ATTGAGGTTAAGATTGCTTGAACTTTAANNAGAGAGAATNTGCCGGATTG
TGGGTGCTGAAGTCTTTTCTATTTGNNNGTTATTGTTATGAANNATTTTG
CTTGTGGGTGTGACGGTANTA
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