DN135126

Overview
NameDN135126
Unique NameDN135126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_MICAN (NAD(P)H-quinone oxidoreductase subunit H OS=Microcystis aeruginosa (strain NIES-843) GN=ndhH PE=3 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 3.467e-89
Identity = 152/195 (77.95%), Postives = 174/195 (89.23%), Query Frame = 3
Query:  120 EKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMM-HNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E   E M++NMGPHHPSMHGVLRLIVTLDGEDVIDCEP++G+LHRGMEKIAENRT + Y+PYV+RWDY A MF EAITVN PE+L +I VPKRA YIRVIMLEL+RIA+HLLWLGPFMAD+GAQTPFFYIFRERE++YDL+EAATGMR++ +NYFRIGGVA DLPYGW+DKC+DFCDYF   V EY+K IT NPI
Sbjct:    5 ETRTEPMVLNMGPHHPSMHGVLRLIVTLDGEDVIDCEPVIGYLHRGMEKIAENRTNVMYVPYVSRWDYAAGMFNEAITVNAPEKLADIAVPKRAQYIRVIMLELNRIANHLLWLGPFMADVGAQTPFFYIFREREMIYDLWEAATGMRLINNNYFRIGGVAVDLPYGWVDKCVDFCDYFDPKVDEYEKLITNNPI 199          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_TRIEI (NAD(P)H-quinone oxidoreductase subunit H OS=Trichodesmium erythraeum (strain IMS101) GN=ndhH PE=3 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 5.914e-89
Identity = 154/201 (76.62%), Postives = 177/201 (88.06%), Query Frame = 3
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMM-HNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            MS + T  E   M++NMGPHHPSMHGVLRLIVTLDGEDVIDCEP++G+LHRGMEKIAENRT   ++PYV+RWDY A MF EA+TVN PEQL +I VPKRASYIRVIMLEL+RIA+HLLWLGPF+AD+GAQTPFFYIFRERE++YDL+EAATG RM+ +NYFRIGGVAADLPYGW+DKC DFCDYFL  V EY++ IT NPI
Sbjct:    1 MSQIQTRTEP--MVINMGPHHPSMHGVLRLIVTLDGEDVIDCEPVIGYLHRGMEKIAENRTNTMFVPYVSRWDYAAGMFNEAVTVNAPEQLADIAVPKRASYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYIFREREMIYDLWEAATGYRMVNNNYFRIGGVAADLPYGWVDKCEDFCDYFLPKVDEYERLITNNPI 199          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_SYNP2 (NAD(P)H-quinone oxidoreductase subunit H OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhH PE=3 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 1.009e-88
Identity = 151/195 (77.44%), Postives = 173/195 (88.72%), Query Frame = 3
Query:  120 EKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMM-HNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E   E M++NMGPHHPSMHGVLRLIVTLDGEDV+DCEP++G+LHRGMEKIAENRT + Y+PYV+RWDY A MF EAITVN PE+L +I VPKRA YIRVIMLEL+RIA+HLLWLGPF+AD+GAQTPFFYIFRERE++YDL+EAATGMR++ +NYFRIGGVA DLPYGW DKCLDFCDYF   V EY+K IT NPI
Sbjct:    5 ETRTEPMVINMGPHHPSMHGVLRLIVTLDGEDVVDCEPVIGYLHRGMEKIAENRTNVMYVPYVSRWDYAAGMFNEAITVNAPEKLADIEVPKRAQYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYIFREREMIYDLWEAATGMRLINNNYFRIGGVAVDLPYGWNDKCLDFCDYFDPKVDEYEKLITNNPI 199          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_ANAVT (NAD(P)H-quinone oxidoreductase subunit H OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ndhH PE=3 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.247e-88
Identity = 147/195 (75.38%), Postives = 173/195 (88.72%), Query Frame = 3
Query:  120 EKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMM-HNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E   E M++NMGPHHPSMHGVLRLIVTLDGEDV+DCEP++G+LHRGMEKIAENRT + Y+PYV+RWDY A MF EA+TVN PE+L  + VPKRASYIRVIMLEL+RIA+HLLW GPF+AD+GAQTPFFY FRERE++YDL+EAATG RM+ +NYFR+GGVAADLPYGW+DKCL+FCDYFL  V EY+K +T NPI
Sbjct:    5 ETRTEPMVLNMGPHHPSMHGVLRLIVTLDGEDVVDCEPVIGYLHRGMEKIAENRTTVMYVPYVSRWDYAAGMFNEAVTVNAPEKLAGVAVPKRASYIRVIMLELNRIANHLLWFGPFLADVGAQTPFFYQFREREMIYDLWEAATGYRMVNNNYFRVGGVAADLPYGWVDKCLEFCDYFLPVVDEYEKLVTNNPI 199          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_ANASP (NAD(P)H-quinone oxidoreductase subunit H OS=Anabaena sp. (strain PCC 7120) GN=ndhH PE=3 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 2.935e-88
Identity = 146/195 (74.87%), Postives = 173/195 (88.72%), Query Frame = 3
Query:  120 EKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMM-HNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E   E M++NMGPHHPSMHGVLRLIVTLDGEDV+DCEP++G+LHRGMEKIAENRT + Y+PYV+RWDY A MF EA+TVN PE+L  + VPKRASYIRVIMLEL+RIA+HLLW GPF+AD+GAQTPFFY FRERE++YDL+EAATG RM+ +NYFR+GGVAADLPYGW+DKCL+FCDYFL  + EY+K +T NPI
Sbjct:    5 ETRTEPMVLNMGPHHPSMHGVLRLIVTLDGEDVVDCEPVIGYLHRGMEKIAENRTTVMYVPYVSRWDYAAGMFNEAVTVNAPEKLAGVAVPKRASYIRVIMLELNRIANHLLWFGPFLADVGAQTPFFYQFREREMIYDLWEAATGYRMVNNNYFRVGGVAADLPYGWVDKCLEFCDYFLPVIDEYEKLVTNNPI 199          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_SYNY3 (NAD(P)H-quinone oxidoreductase subunit H OS=Synechocystis sp. (strain PCC 6803) GN=ndhH PE=1 SV=3)

HSP 1 Score: 323.553 bits (828), Expect = 6.539e-88
Identity = 150/195 (76.92%), Postives = 173/195 (88.72%), Query Frame = 3
Query:  120 EKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMM-HNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E   E M++NMGPHHPSMHGVLRLIVTLDGEDV+DCEP++G+LHRGMEKIAE+RT I Y+PYV+RWDY A MF EAITVN PE+L +I VPKRA YIRVIMLEL+RIA+HLLWLGPFMAD+GAQTPFFYIFRERE++YDL+EAA+GMR++ +NYFR+GGVA DLPYGW DKC DFCDYFL  V EY+K IT NPI
Sbjct:    5 ETRTEPMVLNMGPHHPSMHGVLRLIVTLDGEDVVDCEPVIGYLHRGMEKIAESRTNIMYVPYVSRWDYAAGMFNEAITVNAPEKLADIEVPKRAQYIRVIMLELNRIANHLLWLGPFMADVGAQTPFFYIFREREMIYDLWEAASGMRLINNNYFRVGGVAVDLPYGWNDKCEDFCDYFLPKVDEYEKLITNNPI 199          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_SYNP6 (NAD(P)H-quinone oxidoreductase subunit H OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndhH PE=3 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 6.539e-88
Identity = 151/201 (75.12%), Postives = 179/201 (89.05%), Query Frame = 3
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMM-HNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++L T  E   M++NMGPHHPSMHGVLRLIVTLDGE+VIDCEP++G+LHRGMEKIAENR+ + ++PYV+RWDY A MF EAITVN PE+L NI VPKRASYIRVIMLEL+RIA+HLLWLGPF+AD+GAQTPFFYIFREREL+YDL+EAATG R++ +NYFRIGGVAADLPYGW++KC+DFCDYF   V EY++ IT NPI
Sbjct:    1 MALLETRTEP--MVLNMGPHHPSMHGVLRLIVTLDGENVIDCEPVIGYLHRGMEKIAENRSNVMFVPYVSRWDYAAGMFNEAITVNAPEKLANIPVPKRASYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYIFRERELIYDLWEAATGQRLINNNYFRIGGVAADLPYGWLEKCIDFCDYFQAKVDEYERLITDNPI 199          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_SYNE7 (NAD(P)H-quinone oxidoreductase subunit H OS=Synechococcus elongatus (strain PCC 7942) GN=ndhH PE=3 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 6.539e-88
Identity = 151/201 (75.12%), Postives = 179/201 (89.05%), Query Frame = 3
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMM-HNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++L T  E   M++NMGPHHPSMHGVLRLIVTLDGE+VIDCEP++G+LHRGMEKIAENR+ + ++PYV+RWDY A MF EAITVN PE+L NI VPKRASYIRVIMLEL+RIA+HLLWLGPF+AD+GAQTPFFYIFREREL+YDL+EAATG R++ +NYFRIGGVAADLPYGW++KC+DFCDYF   V EY++ IT NPI
Sbjct:    1 MALLETRTEP--MVLNMGPHHPSMHGVLRLIVTLDGENVIDCEPVIGYLHRGMEKIAENRSNVMFVPYVSRWDYAAGMFNEAITVNAPEKLANIPVPKRASYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYIFRERELIYDLWEAATGQRLINNNYFRIGGVAADLPYGWLEKCIDFCDYFQAKVDEYERLITDNPI 199          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_THEEB (NAD(P)H-quinone oxidoreductase subunit H OS=Thermosynechococcus elongatus (strain BP-1) GN=ndhH PE=3 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.457e-87
Identity = 150/195 (76.92%), Postives = 171/195 (87.69%), Query Frame = 3
Query:  120 EKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMM-HNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E   E M++NMGPHHPSMHGVLRL+VTLDGEDVIDCEP++G+LHRGMEKIAENRT I ++PYV+RWDY A MF EA+TVN PE+L  I VPKRASYIRVIMLEL+RIA+HLLWLGPF+AD+GAQTPFFYIFRERE +YDLFEAATGMR + +NYFRIGGVAADL YGW+ KC DFCDYFL  V EY++ IT NPI
Sbjct:    5 ETRTEPMVINMGPHHPSMHGVLRLMVTLDGEDVIDCEPVIGYLHRGMEKIAENRTNIMFIPYVSRWDYAAGMFNEAVTVNAPEKLAGIPVPKRASYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYIFREREYIYDLFEAATGMRFINNNYFRIGGVAADLTYGWVTKCRDFCDYFLPKVDEYERLITNNPI 199          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_NOSP7 (NAD(P)H-quinone oxidoreductase subunit H OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ndhH PE=3 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.233e-86
Identity = 144/195 (73.85%), Postives = 172/195 (88.21%), Query Frame = 3
Query:  120 EKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMM-HNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E   E M++NMGPHHPSMHGVLRLI+TLDGEDV+DCEP++G+LHRGMEKIAENRT + Y+PYV+RWDY A MF EA+TVN PE+L  + VPKRASYIRVIMLEL+RIA+HLLW GPF+AD+GAQTPFFY FRERE++YDL+EAATG RM+ +NYFR+GGVAADLPYGW+DKCL+FCDY L  V EY++ +T NPI
Sbjct:    5 ETRTEPMVLNMGPHHPSMHGVLRLIMTLDGEDVVDCEPVIGYLHRGMEKIAENRTNVMYVPYVSRWDYAAGMFNEAVTVNAPEKLAGVAVPKRASYIRVIMLELNRIANHLLWFGPFLADVGAQTPFFYQFREREMIYDLWEAATGYRMVNNNYFRVGGVAADLPYGWVDKCLEFCDYLLPKVDEYERLVTDNPI 199          
The following BLAST results are available for this feature:
BLAST of DN135126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHH_MICAN3.467e-8977.95NAD(P)H-quinone oxidoreductase subunit H OS=Microc... [more]
NDHH_TRIEI5.914e-8976.62NAD(P)H-quinone oxidoreductase subunit H OS=Tricho... [more]
NDHH_SYNP21.009e-8877.44NAD(P)H-quinone oxidoreductase subunit H OS=Synech... [more]
NDHH_ANAVT2.247e-8875.38NAD(P)H-quinone oxidoreductase subunit H OS=Anabae... [more]
NDHH_ANASP2.935e-8874.87NAD(P)H-quinone oxidoreductase subunit H OS=Anabae... [more]
NDHH_SYNY36.539e-8876.92NAD(P)H-quinone oxidoreductase subunit H OS=Synech... [more]
NDHH_SYNP66.539e-8875.12NAD(P)H-quinone oxidoreductase subunit H OS=Synech... [more]
NDHH_SYNE76.539e-8875.12NAD(P)H-quinone oxidoreductase subunit H OS=Synech... [more]
NDHH_THEEB1.457e-8776.92NAD(P)H-quinone oxidoreductase subunit H OS=Thermo... [more]
NDHH_NOSP71.233e-8673.85NAD(P)H-quinone oxidoreductase subunit H OS=Nostoc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionwca06f03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06f03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135126 ID=DN135126; Name=DN135126; organism=Citrus sinensis; type=EST; length=703bp
GGGGAAATTTGAAAAANNNNTTCGAATTATTTGATTTTGACTGTTGATGA
ACTTCTTGTTGTTTTCAACAATTCATGTAAGAATGAATCGAGGAAAAACC
TATGAGTATACTAGCTACAGAAAAAGAAAAAGAATTTATGATAGTCAATA
TGGGACCTCACCACCCGTCAATGCATGGGGTTCTTCGTCTCATCGTTACT
CTAGACGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTCATTTACA
CAGAGGGATGGAAAAAATTGCGGAAAACCGAACAATTATACAATATCTGC
CTTATGTAACCCGTTGGGATTATTTAGCTACTATGTTCACAGAAGCAATA
ACTGTAAATGGACCAGAACAGTTGGGAAATATTCGCGTACCTAAAAGGGC
CAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCCCATC
TGTTATGGCTTGGCCCTTTTATGGCAGATATTGGTGCACAGACTCCTTTC
TTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTGTTCGAAGCTGC
CACCGGTATGAGAATGATGCATAATTATTTTCGTATCGGAGGAGTAGCAG
CTGATTTACCCTATGGTTGGATAGATAAATGTTTGGATTTCTGCGATTAT
TTTTTAACAGGGGTTGCTGAATATCAAAAACNNATTACGCGAAACCCCAT
TTT
back to top