DN135126

Overview
NameDN135126
Unique NameDN135126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUBCD_GEOUR (NADH-quinone oxidoreductase subunit B/C/D OS=Geobacter uraniireducens (strain Rf4) GN=nuoBCD PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.288e-47
Identity = 91/192 (47.40%), Postives = 126/192 (65.62%), Query Frame = 3
Query:  126 EKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            ++E +I+N+GP HP  HG++R I+ L GE+++D +  +G  HRG EK+ E +   Q++PY  R DYLA +      VN  E+L +I VP RA YIRV++ EL RIASHL+WLG F AD+GA TP FY F +RE ++D+ E  TG RM   +FRIGGVA DLP GW +    F  +F   + EY++ +  NPI
Sbjct:  406 DEETLILNLGPQHPGTHGIIRFILKLKGEEIVDMDTDIGFHHRGAEKMGERQHWNQFIPYTDRIDYLAGVQNNLAYVNSVERLCSITVPDRAVYIRVMLAELFRIASHLVWLGTFAADVGAMTPVFYTFTDREKIFDIVEMITGGRMHPAWFRIGGVAEDLPEGWEEPVKAFLAWFPPRLKEYEELLNGNPI 597          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_CAMJ8 (NADH-quinone oxidoreductase subunit D OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=nuoD PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.314e-47
Identity = 92/197 (46.70%), Postives = 125/197 (63.45%), Query Frame = 3
Query:  111 LATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            +A E+E   MI+N+GP HPS HG LRLI+ LDGE V+   P +G++HRGMEK+AEN    +++P   R DY+A            E+L  + +P+RA+ IR+I+LEL+RIASHLLWL     DIGA + F Y FRERE V DL E   G R+ H+  RIGGV  DLP  ++++ L FCD F   + +Y+  +  N I
Sbjct:   14 IAFEQEDSKMIINLGPQHPSAHGNLRLILELDGEQVVKARPCIGYMHRGMEKMAENMIYQEFIPTTDRMDYIAASANNYAYCAAVEKLCGLEIPRRAAVIRMILLELNRIASHLLWLATHALDIGAMSVFLYCFREREYVLDLIEKYCGARLTHSSMRIGGVMLDLPENYLEEMLVFCDKFPNDLKDYEDLLDDNRI 210          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_CAMJR (NADH-quinone oxidoreductase subunit D OS=Campylobacter jejuni (strain RM1221) GN=nuoD PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.629e-46
Identity = 91/197 (46.19%), Postives = 124/197 (62.94%), Query Frame = 3
Query:  111 LATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            +A E+E   MI+N+GP HPS HG LRLI+ LDGE V+   P +G++HRGMEK+AEN    +++P   R DY+A            E+L  + +P+RA+ IR+I+LEL+RI SHLLWL     DIGA + F Y FRERE V DL E   G R+ H+  RIGGV  DLP  ++++ L FCD F   + +Y+  +  N I
Sbjct:   14 IAFEQEDSKMIINLGPQHPSAHGNLRLILELDGEQVVKARPCIGYMHRGMEKMAENMIYQEFIPTTDRMDYIAASANNYAYCAAVEKLCGLEIPRRAAVIRMILLELNRITSHLLWLATHALDIGAMSVFLYCFREREYVLDLIEKYCGARLTHSSMRIGGVMLDLPENYLEEMLAFCDKFPNDLKDYEDLLDDNRI 210          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_CAMJJ (NADH-quinone oxidoreductase subunit D OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=nuoD PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.629e-46
Identity = 91/197 (46.19%), Postives = 124/197 (62.94%), Query Frame = 3
Query:  111 LATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            +A E+E   MI+N+GP HPS HG LRLI+ LDGE V+   P +G++HRGMEK+AEN    +++P   R DY+A            E+L  + +P+RA+ IR+I+LEL+RI SHLLWL     DIGA + F Y FRERE V DL E   G R+ H+  RIGGV  DLP  ++++ L FCD F   + +Y+  +  N I
Sbjct:   14 IAFEQEDSKMIINLGPQHPSAHGNLRLILELDGEQVVKARPCIGYMHRGMEKMAENMIYQEFIPTTDRMDYIAASANNYAYCAAVEKLCGLEIPRRAAVIRMILLELNRITSHLLWLATHALDIGAMSVFLYCFREREYVLDLIEKYCGARLTHSSMRIGGVMLDLPENYLEEMLAFCDKFPNDLKDYEDLLDDNRI 210          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_CAMJE (NADH-quinone oxidoreductase subunit D OS=Campylobacter jejuni GN=nuoD PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.629e-46
Identity = 91/197 (46.19%), Postives = 124/197 (62.94%), Query Frame = 3
Query:  111 LATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            +A E+E   MI+N+GP HPS HG LRLI+ LDGE V+   P +G++HRGMEK+AEN    +++P   R DY+A            E+L  + +P+RA+ IR+I+LEL+RI SHLLWL     DIGA + F Y FRERE V DL E   G R+ H+  RIGGV  DLP  ++++ L FCD F   + +Y+  +  N I
Sbjct:   14 IAFEQEDSKMIINLGPQHPSAHGNLRLILELDGEQVVKARPCIGYMHRGMEKMAENMIYQEFIPTTDRMDYIAASANNYAYCAAVEKLCGLEIPRRAAVIRMILLELNRITSHLLWLATHALDIGAMSVFLYCFREREYVLDLIEKYCGARLTHSSMRIGGVMLDLPENYLEEMLAFCDKFPNDLKDYEDLLDDNRI 210          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_BACAN (NADH-quinone oxidoreductase subunit D OS=Bacillus anthracis GN=nuoD PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.629e-46
Identity = 85/190 (44.74%), Postives = 121/190 (63.68%), Query Frame = 3
Query:  132 EFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E M++N+GP HPS HGV RL++ +DGE + +  P++G+LHRG EKIAE+    Q +PY  R DYL+ M    +  +  E +  + +P+RA Y+RV+ +EL RIASHL+W G  + DIGA +PF Y FRERE++ +L     G R+  NY R+GGV  D P GWI+K  +F  Y    +A Y   ++ N I
Sbjct:    5 EEMLLNVGPQHPSTHGVFRLVIKIDGEIIKEATPVIGYLHRGTEKIAESLQYTQIIPYTDRMDYLSAMTNNYVICHAVETMMGLEIPERAEYLRVLAMELGRIASHLVWWGTNLLDIGAVSPFLYAFREREMIINLLNELCGARLTFNYMRVGGVKWDAPDGWIEKVKEFVPYMREQLAGYHDLVSGNEI 194          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_CAMJD (NADH-quinone oxidoreductase subunit D OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=nuoD PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.128e-46
Identity = 91/197 (46.19%), Postives = 124/197 (62.94%), Query Frame = 3
Query:  111 LATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            +A E+E   MI+N+GP HPS HG LRLI+ LDGE V+   P +G++HRGMEK+AEN    +++P   R DY+A            E+L  + +P+RA+ IR+I+LEL+RI SHLLWL     DIGA + F Y FRERE V DL E   G R+ H+  RIGGV  DLP  ++++ L FCD F   + +Y+  +  N I
Sbjct:   14 IAFEQEDSKMIINLGPQHPSAHGNLRLILELDGEQVVKARPCIGYMHRGMEKMAENMIYQEFIPTTDRMDYIAASANNYAYCAAVEKLCGLEIPRRAAVIRMILLELNRITSHLLWLATHALDIGAMSVFLYCFREREYVLDLIEKYCGARLTHSSMRIGGVMLDLPENYLEEMLVFCDKFPNDLKDYEDLLDDNRI 210          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_BACHK (NADH-quinone oxidoreductase subunit D OS=Bacillus thuringiensis subsp. konkukian GN=nuoD PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.128e-46
Identity = 85/190 (44.74%), Postives = 121/190 (63.68%), Query Frame = 3
Query:  132 EFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E M++N+GP HPS HGV RL++ +DGE + +  P++G+LHRG EKIAE+    Q +PY  R DYL+ M    +  +  E +  + +P+RA Y+RV+ +EL RIASHL+W G  + DIGA +PF Y FRERE++ +L     G R+  NY R+GGV  D P GWI+K  +F  Y    +A Y   ++ N I
Sbjct:    5 EEMLLNVGPQHPSTHGVFRLVIKIDGEIIKEATPVIGYLHRGTEKIAESLQYTQIIPYTDRMDYLSAMTNNYVICHAVETMMGLEIPERAEYLRVLAMELGRIASHLVWWGTNLLDIGAVSPFLYAFREREMIINLLNELCGARLTFNYMRVGGVKWDAPDGWIEKVEEFVPYMREQLAGYHDLVSGNEI 194          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_BACCZ (NADH-quinone oxidoreductase subunit D OS=Bacillus cereus (strain ZK / E33L) GN=nuoD PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.128e-46
Identity = 85/190 (44.74%), Postives = 121/190 (63.68%), Query Frame = 3
Query:  132 EFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E M++N+GP HPS HGV RL++ +DGE + +  P++G+LHRG EKIAE+    Q +PY  R DYL+ M    +  +  E +  + +P+RA Y+RV+ +EL RIASHL+W G  + DIGA +PF Y FRERE++ +L     G R+  NY R+GGV  D P GWI+K  +F  Y    +A Y   ++ N I
Sbjct:    5 EEMLLNVGPQHPSTHGVFRLVIKIDGEIIKEATPVIGYLHRGTEKIAESLQYTQIIPYTDRMDYLSAMTNNYVICHAVETMMGLEIPERAEYLRVLAMELGRIASHLVWWGTNLLDIGAVSPFLYAFREREMIINLLNELCGARLTFNYMRVGGVKWDAPDGWIEKVEEFVPYMREQLAGYHDLVSGNEI 194          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_BACCR (NADH-quinone oxidoreductase subunit D OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=nuoD PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.128e-46
Identity = 85/190 (44.74%), Postives = 121/190 (63.68%), Query Frame = 3
Query:  132 EFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E M++N+GP HPS HGV RL++ +DGE + +  P++G+LHRG EKIAE+    Q +PY  R DYL+ M    +  +  E +  + +P+RA Y+RV+ +EL RIASHL+W G  + DIGA +PF Y FRERE++ +L     G R+  NY R+GGV  D P GWI+K  +F  Y    +A Y   ++ N I
Sbjct:    5 EEMLLNVGPQHPSTHGVFRLVIKIDGEIIKEATPVIGYLHRGTEKIAESLQYTQIIPYTDRMDYLSAMTNNYVICHAVETMMGLEIPERAEYLRVLAMELGRIASHLVWWGTNLLDIGAVSPFLYAFREREMIINLLNELCGARLTFNYMRVGGVKWDAPDGWIEKVEEFVPYMREQLAGYHDLVSGNEI 194          
The following BLAST results are available for this feature:
BLAST of DN135126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NUBCD_GEOUR4.288e-4747.40NADH-quinone oxidoreductase subunit B/C/D OS=Geoba... [more]
NUOD_CAMJ87.314e-4746.70NADH-quinone oxidoreductase subunit D OS=Campyloba... [more]
NUOD_CAMJR1.629e-4646.19NADH-quinone oxidoreductase subunit D OS=Campyloba... [more]
NUOD_CAMJJ1.629e-4646.19NADH-quinone oxidoreductase subunit D OS=Campyloba... [more]
NUOD_CAMJE1.629e-4646.19NADH-quinone oxidoreductase subunit D OS=Campyloba... [more]
NUOD_BACAN1.629e-4644.74NADH-quinone oxidoreductase subunit D OS=Bacillus ... [more]
NUOD_CAMJD2.128e-4646.19NADH-quinone oxidoreductase subunit D OS=Campyloba... [more]
NUOD_BACHK2.128e-4644.74NADH-quinone oxidoreductase subunit D OS=Bacillus ... [more]
NUOD_BACCZ2.128e-4644.74NADH-quinone oxidoreductase subunit D OS=Bacillus ... [more]
NUOD_BACCR2.128e-4644.74NADH-quinone oxidoreductase subunit D OS=Bacillus ... [more]

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Properties
Property NameValue
Genbank descriptionwca06f03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06f03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135126 ID=DN135126; Name=DN135126; organism=Citrus sinensis; type=EST; length=703bp
GGGGAAATTTGAAAAANNNNTTCGAATTATTTGATTTTGACTGTTGATGA
ACTTCTTGTTGTTTTCAACAATTCATGTAAGAATGAATCGAGGAAAAACC
TATGAGTATACTAGCTACAGAAAAAGAAAAAGAATTTATGATAGTCAATA
TGGGACCTCACCACCCGTCAATGCATGGGGTTCTTCGTCTCATCGTTACT
CTAGACGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTCATTTACA
CAGAGGGATGGAAAAAATTGCGGAAAACCGAACAATTATACAATATCTGC
CTTATGTAACCCGTTGGGATTATTTAGCTACTATGTTCACAGAAGCAATA
ACTGTAAATGGACCAGAACAGTTGGGAAATATTCGCGTACCTAAAAGGGC
CAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCCCATC
TGTTATGGCTTGGCCCTTTTATGGCAGATATTGGTGCACAGACTCCTTTC
TTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTGTTCGAAGCTGC
CACCGGTATGAGAATGATGCATAATTATTTTCGTATCGGAGGAGTAGCAG
CTGATTTACCCTATGGTTGGATAGATAAATGTTTGGATTTCTGCGATTAT
TTTTTAACAGGGGTTGCTGAATATCAAAAACNNATTACGCGAAACCCCAT
TTT
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