DN135126

Overview
NameDN135126
Unique NameDN135126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_BACC1 (NADH-quinone oxidoreductase subunit D OS=Bacillus cereus (strain ATCC 10987) GN=nuoD PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.128e-46
Identity = 85/190 (44.74%), Postives = 121/190 (63.68%), Query Frame = 3
Query:  132 EFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E M++N+GP HPS HGV RL++ +DGE + +  P++G+LHRG EKIAE+    Q +PY  R DYL+ M    +  +  E +  + +P+RA Y+RV+ +EL RIASHL+W G  + DIGA +PF Y FRERE++ +L     G R+  NY R+GGV  D P GWI+K  +F  Y    +A Y   ++ N I
Sbjct:    5 EEMLLNVGPQHPSTHGVFRLVIKIDGEIIKEATPVIGYLHRGTEKIAESLQYTQIIPYTDRMDYLSAMTNNYVICHAVETMMGLEIPERAEYLRVLAMELGRIASHLVWWGTNLLDIGAVSPFLYAFREREMIINLLNELCGARLTFNYMRVGGVKWDAPDGWIEKVEEFVPYMREQLAGYHDLVSGNEI 194          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUBCD_GEOSL (NADH-quinone oxidoreductase subunit B/C/D OS=Geobacter sulfurreducens GN=nuoBCD PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.128e-46
Identity = 91/201 (45.27%), Postives = 126/201 (62.69%), Query Frame = 3
Query:   99 PMSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            P S      ++E +I+N+GP HP  HG++R ++ LDGE+++D +  +G+ HRG EKI E +   Q++PY  R DYLA +      VN  E+L  I VP R   IRV++ EL RIA+HL+WLG F AD+GA TP FY F +RE ++D+ E  TG RM  ++FRIGGVA DLP GW      F D+    + EY+  +  NPI
Sbjct:  396 PASDFFDRIDEETLILNLGPQHPGTHGIIRFVLKLDGEEIVDMDTDIGYHHRGAEKIGERQHWNQFIPYTDRIDYLAGVQNNLAYVNSVERLCGITVPDRGIAIRVMLAELFRIANHLVWLGTFAADVGAMTPVFYTFTDREKIFDIVEMVTGGRMHPSWFRIGGVADDLPEGWDGAVKAFLDWMPGRLKEYEDLLKGNPI 596          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_BACAH (NADH-quinone oxidoreductase subunit D OS=Bacillus thuringiensis (strain Al Hakam) GN=nuoD PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.779e-46
Identity = 85/190 (44.74%), Postives = 121/190 (63.68%), Query Frame = 3
Query:  132 EFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E M++N+GP HPS HGV RL++ +DGE + +  P++G+LHRG EKIAE+    Q +PY  R DYL+ M    +  +  E +  + +P+RA Y+RV+ +EL RIASHL+W G  + DIGA +PF Y FRERE++ +L     G R+  NY R+GGV  D P GWI+K  +F  Y    +A Y   ++ N I
Sbjct:    5 EEMLLNVGPQHPSTHGVFRLVIKIDGEIIKEATPVIGYLHRGTEKIAESLQYTQIIPYTDRMDYLSAMTNNYVICHAVETMIGLEIPERAEYLRVLAMELGRIASHLVWWGTNLLDIGAVSPFLYAFREREMIINLLNELCGARLTFNYMRVGGVKWDAPDGWIEKVEEFVPYMREQLAGYHDLVSGNEI 194          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_BACCN (NADH-quinone oxidoreductase subunit D OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=nuoD PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.741e-46
Identity = 85/190 (44.74%), Postives = 119/190 (62.63%), Query Frame = 3
Query:  132 EFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E M++N+GP HPS HGV RLI+ +DGE + +  P++G+LHRG EKIAE+    Q +PY  R DYL+ M    +  +  E +  + +P+RA Y+RV+ +EL R+ASHL+W G  + DIGA +PF Y FRERE+V +L     G R+  NY R+GGV  D P GWI K  +F  Y    +  Y   ++ N I
Sbjct:    5 EEMLLNVGPQHPSTHGVFRLIIKIDGETIKEATPVIGYLHRGTEKIAESLQYTQIIPYTDRMDYLSAMTNNYVICHAVETMMGLEIPERAEYLRVLAMELGRVASHLVWWGTNLLDIGAVSPFLYAFREREMVINLLNELCGARLTFNYMRVGGVKWDAPDGWIQKVREFVPYMKEQLKGYHDLVSGNEI 194          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD2_ACIBL (NADH-quinone oxidoreductase subunit D 2 OS=Acidobacteria bacterium (strain Ellin345) GN=nuoD2 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.741e-46
Identity = 92/201 (45.77%), Postives = 127/201 (63.18%), Query Frame = 3
Query:   99 PMSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            P  +L   ++K  M++NMGP HPS HGVLRL++ +DGE ++   P +G+LH G+EK  E +   Q +P   R DYL  M      V   E+L  + +P+RA +IRV+  EL+RI SHL+WLG    D+GA T F Y FRERE +  LFEA  G RMM +YFR+GGV+ + P GW D+   F D F + + EY+  +T+NPI
Sbjct:    6 PTPVLEAGQDKT-MVLNMGPQHPSTHGVLRLLLEIDGETIVRIMPDIGYLHTGIEKTCEAKFYQQVVPMTDRIDYLCPMTNNLAYVLAVEKLLGLEIPERAQWIRVLCNELTRINSHLVWLGTGAMDLGAMTVFLYCFREREELLKLFEAVAGQRMMTSYFRVGGVSLEPPLGWFDRVKKFADTFPSKMDEYEGLLTQNPI 205          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_CARHZ (NADH-quinone oxidoreductase subunit D OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=nuoD PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.192e-46
Identity = 92/186 (49.46%), Postives = 123/186 (66.13%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            +N+GP HPS HGV R+I+ LDGE ++D EP++G+LHRG+EK+AE+RT  Q +PY  R DYL  M      V   E+L  I VP+RA +IRVI  ELSRIASH ++L     D+G+ T + Y FR+RELV +L E  TG RM  ++ RIGGVA DLP G+I+K  ++    L GV E +  +  N I
Sbjct:    9 INVGPQHPSTHGVFRIILKLDGETIVDAEPVVGYLHRGIEKLAEDRTYTQVIPYTDRMDYLGAMSYNLGYVQAIEKLMGIEVPERAEFIRVIATELSRIASHHVFLASMSLDMGSYTGWMYPFRDRELVLELLEMLTGSRMTFSFMRIGGVADDLPEGFIEKAKEYLPKILDGVDEEEGLLAGNEI 194          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_BACWK (NADH-quinone oxidoreductase subunit D OS=Bacillus weihenstephanensis (strain KBAB4) GN=nuoD PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.192e-46
Identity = 83/190 (43.68%), Postives = 121/190 (63.68%), Query Frame = 3
Query:  132 EFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E M++N+GP HPS HGV RL++ +DGE + +  P++G+LHRG EKIAE+    Q +PY  R DYL+ M    +  +  E + ++ +P+RA Y+RV+ +EL R+ASHL+W G  + DIGA +PF Y FRERE++ +L     G R+  NY R+GGV  D P GWI+K  +F  Y    +  Y   ++ N I
Sbjct:    5 EEMLLNVGPQHPSTHGVFRLVIKIDGEIIKEATPVIGYLHRGTEKIAESLQYTQIIPYTDRMDYLSAMTNNYVLCHAVETMMDLEIPERAEYLRVLAMELGRVASHLVWWGTNLLDIGAVSPFLYAFREREMIINLLSELCGARLTFNYMRVGGVKWDAPDGWIEKVKEFVPYMREQLEGYHDLVSGNEI 194          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOCD_ENT38 (NADH-quinone oxidoreductase subunit C/D OS=Enterobacter sp. (strain 638) GN=nuoC PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.192e-46
Identity = 91/196 (46.43%), Postives = 125/196 (63.78%), Query Frame = 3
Query:  114 ATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            +TE E +FM +N+GP+HPS HG  R+I+ LDGE+++DC P +G+ HRG EK+ E ++   Y+PY  R +YL     E   V   E+L  I VP R + IRV++ EL RI SHLL++  F+ D+GA TP F+ F +R+ +YD+ EA TG RM   +FRIGGVA DLP GW     DF D+    +  Y+K   RN I
Sbjct:  204 STENE-DFMFLNLGPNHPSSHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDVVEAITGFRMHPAWFRIGGVAHDLPRGWDKLLRDFLDWMPKRLDSYEKAALRNTI 398          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_HELMI (NADH-quinone oxidoreductase subunit D OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=nuoD PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 92/186 (49.46%), Postives = 117/186 (62.90%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            +N GP HPS HGVLR+++ LDGE V+   P++G+LHRG+EKI ENRT IQ +P+  R DYLA M          E+L  + VP+RA YIRVIM ELSRIASH++  G  + D+G  T F +  R+RE + +LF  A G RM  NY R GGVA DLP GW+ +C  F   F   +  Y K I  N I
Sbjct:    8 LNFGPQHPSTHGVLRIVLELDGEVVVKATPVIGYLHRGIEKICENRTYIQTVPFTDRMDYLAGMGNNLGISQAVEKLMGVEVPERAEYIRVIMCELSRIASHMICCGSLVQDLGGVTGFVFFIRDREHILELFNRACGARMTFNYIRPGGVAQDLPDGWVAQCRKFLADFKGMMETYDKLIVGNEI 193          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOCD_SHISS (NADH-quinone oxidoreductase subunit C/D OS=Shigella sonnei (strain Ss046) GN=nuoC PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.056e-45
Identity = 90/195 (46.15%), Postives = 125/195 (64.10%), Query Frame = 3
Query:  117 TEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            TE E +FM +N+GP+HPS HG  R+++ LDGE+++DC P +G+ HRG EK+ E ++   Y+PY  R +YL     E   V   E+L  I VP R + IRV++ EL RI SHLL++  F+ D+GA TP F+ F +R+ +YDL EA TG RM   +FRIGGVA DLP GW     +F D+    +A Y+K   +N I
Sbjct:  210 TENE-DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTI 403          
The following BLAST results are available for this feature:
BLAST of DN135126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NUOD_BACC12.128e-4644.74NADH-quinone oxidoreductase subunit D OS=Bacillus ... [more]
NUBCD_GEOSL2.128e-4645.27NADH-quinone oxidoreductase subunit B/C/D OS=Geoba... [more]
NUOD_BACAH2.779e-4644.74NADH-quinone oxidoreductase subunit D OS=Bacillus ... [more]
NUOD_BACCN4.741e-4644.74NADH-quinone oxidoreductase subunit D OS=Bacillus ... [more]
NUOD2_ACIBL4.741e-4645.77NADH-quinone oxidoreductase subunit D 2 OS=Acidoba... [more]
NUOD_CARHZ6.192e-4649.46NADH-quinone oxidoreductase subunit D OS=Carboxydo... [more]
NUOD_BACWK6.192e-4643.68NADH-quinone oxidoreductase subunit D OS=Bacillus ... [more]
NUOCD_ENT386.192e-4646.43NADH-quinone oxidoreductase subunit C/D OS=Enterob... [more]
NUOD_HELMI8.087e-4649.46NADH-quinone oxidoreductase subunit D OS=Heliobact... [more]
NUOCD_SHISS1.056e-4546.15NADH-quinone oxidoreductase subunit C/D OS=Shigell... [more]

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Properties
Property NameValue
Genbank descriptionwca06f03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06f03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135126 ID=DN135126; Name=DN135126; organism=Citrus sinensis; type=EST; length=703bp
GGGGAAATTTGAAAAANNNNTTCGAATTATTTGATTTTGACTGTTGATGA
ACTTCTTGTTGTTTTCAACAATTCATGTAAGAATGAATCGAGGAAAAACC
TATGAGTATACTAGCTACAGAAAAAGAAAAAGAATTTATGATAGTCAATA
TGGGACCTCACCACCCGTCAATGCATGGGGTTCTTCGTCTCATCGTTACT
CTAGACGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTCATTTACA
CAGAGGGATGGAAAAAATTGCGGAAAACCGAACAATTATACAATATCTGC
CTTATGTAACCCGTTGGGATTATTTAGCTACTATGTTCACAGAAGCAATA
ACTGTAAATGGACCAGAACAGTTGGGAAATATTCGCGTACCTAAAAGGGC
CAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCCCATC
TGTTATGGCTTGGCCCTTTTATGGCAGATATTGGTGCACAGACTCCTTTC
TTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTGTTCGAAGCTGC
CACCGGTATGAGAATGATGCATAATTATTTTCGTATCGGAGGAGTAGCAG
CTGATTTACCCTATGGTTGGATAGATAAATGTTTGGATTTCTGCGATTAT
TTTTTAACAGGGGTTGCTGAATATCAAAAACNNATTACGCGAAACCCCAT
TTT
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