DN135126

Overview
NameDN135126
Unique NameDN135126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_MANES (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Manihot esculenta GN=ndhH PE=3 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 1.004e-104
Identity = 183/200 (91.50%), Postives = 191/200 (95.50%), Query Frame = 3 
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++ AT K+   MIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPE LGNI+VPKRA YIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHN+FRIGGVA+DLP+GWIDKCLDFCDYFLTGV EYQK ITRNPI
Sbjct:    1 MNVPATRKD--LMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPELLGNIQVPKRAGYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNFFRIGGVASDLPHGWIDKCLDFCDYFLTGVTEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_OLIPU (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Olimarabidopsis pumila GN=ndhH PE=3 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.713e-104
Identity = 179/191 (93.72%), Postives = 185/191 (96.86%), Query Frame = 3 
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGPHHPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENR IIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE VYDLFEAATGMRMMHN+FRIGG+AADLPYGWIDKCLDFCDYFLT V EYQK ITRNPI
Sbjct:    8 KDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCDYFLTEVVEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_NASOF (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Nasturtium officinale GN=ndhH PE=3 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.713e-104
Identity = 179/191 (93.72%), Postives = 185/191 (96.86%), Query Frame = 3 
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGPHHPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENR IIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE VYDLFEAATGMRMMHN+FRIGG+AADLPYGWIDKCLDFCDYFLT V EYQK ITRNPI
Sbjct:    8 KDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCDYFLTEVVEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_NANDO (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Nandina domestica GN=ndhH PE=3 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.713e-104
Identity = 180/191 (94.24%), Postives = 186/191 (97.38%), Query Frame = 3 
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLP+GWIDKCLDFCDYF+TGV EYQK ITRNPI
Sbjct:    8 KDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPHGWIDKCLDFCDYFVTGVTEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_LOBMA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Lobularia maritima GN=ndhH PE=3 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.713e-104
Identity = 179/191 (93.72%), Postives = 185/191 (96.86%), Query Frame = 3 
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGPHHPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENR IIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE VYDLFEAATGMRMMHN+FRIGG+AADLPYGWIDKCLDFCDYFLT V EYQK ITRNPI
Sbjct:    8 KDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCDYFLTEVVEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_LEPVR (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Lepidium virginicum GN=ndhH PE=3 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.713e-104
Identity = 179/191 (93.72%), Postives = 185/191 (96.86%), Query Frame = 3 
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGPHHPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENR IIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE VYDLFEAATGMRMMHN+FRIGG+AADLPYGWIDKCLDFCDYFLT V EYQK ITRNPI
Sbjct:    8 KDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCDYFLTEVVEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_CAPBU (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Capsella bursa-pastoris GN=ndhH PE=3 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.713e-104
Identity = 179/191 (93.72%), Postives = 185/191 (96.86%), Query Frame = 3 
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGPHHPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENR IIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE VYDLFEAATGMRMMHN+FRIGG+AADLPYGWIDKCLDFCDYFLT V EYQK ITRNPI
Sbjct:    8 KDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCDYFLTEVVEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_BARVE (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Barbarea verna GN=ndhH PE=3 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.713e-104
Identity = 179/191 (93.72%), Postives = 185/191 (96.86%), Query Frame = 3 
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGPHHPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENR IIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE VYDLFEAATGMRMMHN+FRIGG+AADLPYGWIDKCLDFCDYFLT V EYQK ITRNPI
Sbjct:    8 KDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCDYFLTEVVEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_ARATH (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Arabidopsis thaliana GN=ndhH PE=3 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.713e-104
Identity = 179/191 (93.72%), Postives = 185/191 (96.86%), Query Frame = 3 
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGPHHPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENR IIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE VYDLFEAATGMRMMHN+FRIGG+AADLPYGWIDKCLDFCDYFLT V EYQK ITRNPI
Sbjct:    8 KDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCDYFLTEVVEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_DRANE (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Draba nemorosa GN=ndhH PE=3 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 2.237e-104
Identity = 178/191 (93.19%), Postives = 185/191 (96.86%), Query Frame = 3 
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGPHHPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENR IIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI++PKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE VYDLFEAATGMRMMHN+FRIGG+AADLPYGWIDKCLDFCDYFLT V EYQK ITRNPI
Sbjct:    8 KDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQIPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCDYFLTEVVEYQKLITRNPI 198
The following BLAST results are available for this feature:
BLAST of DN135126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHH_MANES1.004e-10491.50NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_OLIPU1.713e-10493.72NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_NASOF1.713e-10493.72NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_NANDO1.713e-10494.24NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_LOBMA1.713e-10493.72NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_LEPVR1.713e-10493.72NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_CAPBU1.713e-10493.72NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_BARVE1.713e-10493.72NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_ARATH1.713e-10493.72NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_DRANE2.237e-10493.19NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionwca06f03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06f03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135126 ID=DN135126; Name=DN135126; organism=Citrus sinensis; type=EST; length=703bp
GGGGAAATTTGAAAAANNNNTTCGAATTATTTGATTTTGACTGTTGATGA
ACTTCTTGTTGTTTTCAACAATTCATGTAAGAATGAATCGAGGAAAAACC
TATGAGTATACTAGCTACAGAAAAAGAAAAAGAATTTATGATAGTCAATA
TGGGACCTCACCACCCGTCAATGCATGGGGTTCTTCGTCTCATCGTTACT
CTAGACGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTCATTTACA
CAGAGGGATGGAAAAAATTGCGGAAAACCGAACAATTATACAATATCTGC
CTTATGTAACCCGTTGGGATTATTTAGCTACTATGTTCACAGAAGCAATA
ACTGTAAATGGACCAGAACAGTTGGGAAATATTCGCGTACCTAAAAGGGC
CAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCCCATC
TGTTATGGCTTGGCCCTTTTATGGCAGATATTGGTGCACAGACTCCTTTC
TTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTGTTCGAAGCTGC
CACCGGTATGAGAATGATGCATAATTATTTTCGTATCGGAGGAGTAGCAG
CTGATTTACCCTATGGTTGGATAGATAAATGTTTGGATTTCTGCGATTAT
TTTTTAACAGGGGTTGCTGAATATCAAAAACNNATTACGCGAAACCCCAT
TTT
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