DN135126

Overview
NameDN135126
Unique NameDN135126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_BURA4 (NADH-quinone oxidoreductase subunit D OS=Burkholderia ambifaria (strain MC40-6) GN=nuoD PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.752e-38
Identity = 77/156 (49.36%), Postives = 105/156 (67.31%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLP 611
            +N GP HP+ HGVLRL++ LDGE +   +P +G LHR  EK+AEN+T IQ +PY+ R DY++ M  E   V   E+L  I VP+RA YIRV+  E++R+ +HL+W+G    D+GA   F Y FRERE + D++EA +G RM   Y+R GGV  DLP
Sbjct:    9 LNFGPQHPAAHGVLRLVLELDGEVIQRADPHIGLLHRATEKLAENKTFIQSVPYMDRLDYVSMMVNEHGYVLAIERLLGIDVPERAQYIRVLFDEITRVLNHLMWIGAHALDVGAMAVFLYAFREREDLMDVYEAVSGARMHAAYYRPGGVYRDLP 164          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_RICFE (NADH-quinone oxidoreductase subunit D OS=Rickettsia felis GN=nuoD PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.206e-38
Identity = 79/184 (42.93%), Postives = 113/184 (61.41%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRN 695
            +N+GP HP+ HGVLRLI+ +DGE V + +P +G LHRG EK+ E++T +Q +PY  R DY++ M  E       E L    VP+RA +IRV+  EL+RI +H L +G    DIGA TP  ++F ERE + + +E  +G RM  NYFR GGVA DLP G ++    F + F   + + +  +  N
Sbjct:   10 LNLGPQHPATHGVLRLILEMDGEVVNNADPHIGLLHRGTEKLIEHKTYLQAIPYFDRLDYVSPMCQEHAFALAVESLLECEVPRRAQFIRVLFSELTRILNHTLNIGSQALDIGATTPLLWLFEEREKIMEFYERVSGSRMHSNYFRPGGVAEDLPDGLLEDIDKFIEQFPPKLHDIESLLNEN 193          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_RICCK (NADH-quinone oxidoreductase subunit D OS=Rickettsia canadensis (strain McKiel) GN=nuoD PE=3 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 6.206e-38
Identity = 79/184 (42.93%), Postives = 113/184 (61.41%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRN 695
            +N+GP HP+ HGVLRLI+ +DGE V + +P +G LHRG EK+ E++T +Q +PY  R DY++ M  E       E L    VP+RA +IRV+  EL+RI +H L +G    DIGA TP  ++F ERE + + +E  +G RM  NYFR GGVA DLP G ++    F + F   + + +  +  N
Sbjct:   10 LNLGPQHPATHGVLRLILEMDGEVVNNTDPHIGLLHRGTEKLIEHKTYLQAIPYFDRLDYVSPMCQEHAFALAVESLLKCEVPRRAQFIRVLFSELTRILNHTLNIGSQALDIGATTPLLWLFEEREKIMEFYERVSGSRMHSNYFRPGGVAEDLPDGLLEDIDKFIEQFHPKLQDVESLLNEN 193          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_DESPS (NADH-quinone oxidoreductase subunit D OS=Desulfotalea psychrophila GN=nuoD PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.206e-38
Identity = 78/190 (41.05%), Postives = 117/190 (61.58%), Query Frame = 3
Query:  132 EFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            E   +N+GP HP+ HGVLR+ +T+DGE +   E ++G++HR  EK+ ENRT  QYLP ++R DYL+ M      V   E+ G+I VP+RA YIR I +EL+R++SHL+W G F+ D+G  +P  Y F +RE + DL E+ TG R+ + Y+R GG+  D+   ++     F       +  Y+  +T N I
Sbjct:   11 ETFTLNLGPQHPATHGVLRVKLTMDGEYIYSAETVIGYIHRMHEKMGENRTYNQYLPNLSRLDYLSAMAYCHGYVLAVEKAGSIEVPERAEYIRAITVELNRLSSHLVWFGAFIMDLGGFSPLMYAFDDREQILDLLESITGSRLTYCYYRFGGLYNDIDDEFLVGTRKFIIRMRKSLKTYRDLVTNNII 200          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_NEIMF (NADH-quinone oxidoreductase subunit D OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=nuoD PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.105e-38
Identity = 77/156 (49.36%), Postives = 103/156 (66.03%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLP 611
            +N GP HP+ HGVLR+I+ L+GE ++  +P +G LHRG EK+AE +T +Q LPY+ R DY++ M  E       E+L  I VP RA YIRV+  E++RI +HL+ +G    DIGA T   Y FR+RE + DL+EA +G RM   YFR GGV  DLP
Sbjct:   10 INFGPQHPAAHGVLRMILELEGETIVRADPHIGLLHRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMFAEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGVYRDLP 165          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_NEIM0 (NADH-quinone oxidoreductase subunit D OS=Neisseria meningitidis serogroup C (strain 053442) GN=nuoD PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.105e-38
Identity = 77/156 (49.36%), Postives = 103/156 (66.03%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLP 611
            +N GP HP+ HGVLR+I+ L+GE ++  +P +G LHRG EK+AE +T +Q LPY+ R DY++ M  E       E+L  I VP RA YIRV+  E++RI +HL+ +G    DIGA T   Y FR+RE + DL+EA +G RM   YFR GGV  DLP
Sbjct:   10 INFGPQHPAAHGVLRMILELEGETIVRADPHIGLLHRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMFAEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGVYRDLP 165          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDUS2_ACACA (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Acanthamoeba castellanii GN=NAD7 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.105e-38
Identity = 87/197 (44.16%), Postives = 116/197 (58.88%), Query Frame = 3
Query:  111 LATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            + T K K F + N GP HP+ HGVLRLI+ LDGE V   +P +G LHRG EK+ E +T IQ LPY  R DY++ M  E       E+L N  VP RA YIRVI  EL+RI +H+L +     D+GA TPF ++F ERE + + +E  +G RM   Y R GGVA D P G  +  + F + F   + E ++ +  N I
Sbjct:   10 IKTSKIKNFTM-NFGPQHPAAHGVLRLILELDGELVRKADPHIGLLHRGTEKLIEYKTYIQALPYFDRLDYVSMMSQEHAYSLAIEKLLNCNVPIRAQYIRVIYSELTRILNHILAVTTHAMDVGALTPFLWLFEEREKLMEFYERVSGARMHAAYIRPGGVAQDFPLGLWNDIMQFVEQFFWRLVEVEELLNGNRI 205          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_RICBR (NADH-quinone oxidoreductase subunit D OS=Rickettsia bellii (strain RML369-C) GN=nuoD PE=3 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.059e-37
Identity = 77/184 (41.85%), Postives = 112/184 (60.87%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRN 695
            +N+GP HP+ HGVLRLI+ +DGE V + +P +G LHRG EK+ E++T +Q +PY  R DY++ M  E       E L    +P+RA +IRV+  EL+RI +H L +G    D+GA TP  ++F ERE + + +E  +G RM  NYFR GGVA DLP G ++    F   F   + + +  +  N
Sbjct:   10 LNLGPQHPATHGVLRLILEMDGEVVNNADPHIGLLHRGTEKLIEHKTYLQAIPYFDRLDYVSPMCQEHAFALAAESLLECEIPRRAQFIRVLFSELTRILNHTLNIGSQALDVGATTPLLWLFEEREKIMEFYERVSGSRMHSNYFRPGGVAEDLPDGLLEDIDKFIQQFPPKLQDIENLLNEN 193          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_RICB8 (NADH-quinone oxidoreductase subunit D OS=Rickettsia bellii (strain OSU 85-389) GN=nuoD PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.059e-37
Identity = 77/184 (41.85%), Postives = 112/184 (60.87%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRN 695
            +N+GP HP+ HGVLRLI+ +DGE V + +P +G LHRG EK+ E++T +Q +PY  R DY++ M  E       E L    +P+RA +IRV+  EL+RI +H L +G    D+GA TP  ++F ERE + + +E  +G RM  NYFR GGVA DLP G ++    F   F   + + +  +  N
Sbjct:   10 LNLGPQHPATHGVLRLILEMDGEVVNNADPHIGLLHRGTEKLIEHKTYLQAIPYFDRLDYVSPMCQEHAFALAAESLLECEIPRRAQFIRVLFSELTRILNHTLNIGSQALDVGATTPLLWLFEEREKIMEFYERVSGSRMHSNYFRPGGVAEDLPDGLLEDIDKFIQQFPPKLQDIENLLNEN 193          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_RALPJ (NADH-quinone oxidoreductase subunit D OS=Ralstonia pickettii (strain 12J) GN=nuoD PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.059e-37
Identity = 76/156 (48.72%), Postives = 104/156 (66.67%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLP 611
            +N GP HP+ HGVLRL++ LDGE +   +P +G LHR  EK+AE +T IQ +PY+ R DY++ M  E   V   E+L  + VP RA YIRV+  E++RI +HL+W+G    D+GA   F Y FRERE ++D++EA +G RM   Y+R GGV  DLP
Sbjct:    9 LNFGPQHPAAHGVLRLVLELDGEVIQRADPHIGLLHRATEKLAEQKTWIQSVPYMDRLDYVSMMVNEHAYVMAIERLLGLEVPLRAQYIRVMFDEITRIMNHLMWIGSHALDVGAMAVFLYAFREREDLFDMYEAVSGARMHAAYYRPGGVYRDLP 164          
The following BLAST results are available for this feature:
BLAST of DN135126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NUOD_BURA44.752e-3849.36NADH-quinone oxidoreductase subunit D OS=Burkholde... [more]
NUOD_RICFE6.206e-3842.93NADH-quinone oxidoreductase subunit D OS=Rickettsi... [more]
NUOD_RICCK6.206e-3842.93NADH-quinone oxidoreductase subunit D OS=Rickettsi... [more]
NUOD_DESPS6.206e-3841.05NADH-quinone oxidoreductase subunit D OS=Desulfota... [more]
NUOD_NEIMF8.105e-3849.36NADH-quinone oxidoreductase subunit D OS=Neisseria... [more]
NUOD_NEIM08.105e-3849.36NADH-quinone oxidoreductase subunit D OS=Neisseria... [more]
NDUS2_ACACA8.105e-3844.16NADH-ubiquinone oxidoreductase 49 kDa subunit OS=A... [more]
NUOD_RICBR1.059e-3741.85NADH-quinone oxidoreductase subunit D OS=Rickettsi... [more]
NUOD_RICB81.059e-3741.85NADH-quinone oxidoreductase subunit D OS=Rickettsi... [more]
NUOD_RALPJ1.059e-3748.72NADH-quinone oxidoreductase subunit D OS=Ralstonia... [more]

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Properties
Property NameValue
Genbank descriptionwca06f03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06f03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135126 ID=DN135126; Name=DN135126; organism=Citrus sinensis; type=EST; length=703bp
GGGGAAATTTGAAAAANNNNTTCGAATTATTTGATTTTGACTGTTGATGA
ACTTCTTGTTGTTTTCAACAATTCATGTAAGAATGAATCGAGGAAAAACC
TATGAGTATACTAGCTACAGAAAAAGAAAAAGAATTTATGATAGTCAATA
TGGGACCTCACCACCCGTCAATGCATGGGGTTCTTCGTCTCATCGTTACT
CTAGACGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTCATTTACA
CAGAGGGATGGAAAAAATTGCGGAAAACCGAACAATTATACAATATCTGC
CTTATGTAACCCGTTGGGATTATTTAGCTACTATGTTCACAGAAGCAATA
ACTGTAAATGGACCAGAACAGTTGGGAAATATTCGCGTACCTAAAAGGGC
CAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCCCATC
TGTTATGGCTTGGCCCTTTTATGGCAGATATTGGTGCACAGACTCCTTTC
TTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTGTTCGAAGCTGC
CACCGGTATGAGAATGATGCATAATTATTTTCGTATCGGAGGAGTAGCAG
CTGATTTACCCTATGGTTGGATAGATAAATGTTTGGATTTCTGCGATTAT
TTTTTAACAGGGGTTGCTGAATATCAAAAACNNATTACGCGAAACCCCAT
TTT
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