DN135126

Overview
NameDN135126
Unique NameDN135126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD2_THEYD (NADH-quinone oxidoreductase subunit D 2 OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=nuoD2 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.080e-37
Identity = 78/187 (41.71%), Postives = 113/187 (60.43%), Query Frame = 3
Query:  141 IVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            ++ MGPHHP+ HGVL+L+   +GE VI+ +P +G+LHRG+EK++E++T    +    R DY+++M          E+L  I  P RA +IR ++ E++R++SHLLWL     DIGA T F Y FRERE +   FE   G R+  +Y RIGGV  D+    +D+   F D  L  V EY+  +T N I
Sbjct:   15 VLQMGPHHPATHGVLKLLCEFEGERVINIKPDVGYLHRGVEKLSESKTYPGAMTLTDRLDYISSMTNNIGYCLAVERLMGIEPPPRAKFIRTMVSEMTRLSSHLLWLATHALDIGAMTVFLYAFREREQILQFFEKICGARLTVSYPRIGGVRVDIKEHVLDEIYKFMDLMLIRVDEYETLLTENRI 201          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_WOLTR (NADH-quinone oxidoreductase subunit D OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=nuoD PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.023e-37
Identity = 79/188 (42.02%), Postives = 114/188 (60.64%), Query Frame = 3
Query:  138 MIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++N GP HP+ HGVLRL++ +DGE +   +P +G LHRG EK+ E++T +Q LPY  R DY++ M  E       E+L    VP RA Y+RV+  EL+RI +HLL +     D+GA TP  ++F ERE + + +E A+G R    Y R GGVAAD+P G I+    F + F   + +  + +T N I
Sbjct:    7 MMLNFGPQHPAAHGVLRLVLEMDGEIIERADPHIGLLHRGTEKLIEHKTYLQALPYFDRLDYVSPMSQEHAYSLCVEKLLQCEVPIRAKYLRVLFCELTRILNHLLNISSQALDVGAMTPLLWLFEEREKILEFYERASGARFHAAYIRPGGVAADVPEGLIEDIAKFIEQFPQYIDDVDELLTENRI 194          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_BURPP (NADH-quinone oxidoreductase subunit D OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=nuoD PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.023e-37
Identity = 76/156 (48.72%), Postives = 103/156 (66.03%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLP 611
            +N GP HP+ HGVLRL++ LDGE +   +P +G LHR  EK+AE +T IQ +PY+ R DY++ M  E   V   E+L  I VP RA YIRV+  E++R+ +HL+W+G    D+GA   F Y FRERE + D++EA +G RM   Y+R GGV  DLP
Sbjct:    9 LNFGPQHPAAHGVLRLVLELDGEVIQRADPHIGLLHRATEKLAETKTFIQSVPYMDRLDYVSMMVNEHGYVMAIEKLLGIEVPVRAQYIRVMFDEVTRVLNHLMWIGAHALDVGAMAVFLYAFREREDLMDVYEAVSGARMHAAYYRPGGVYRDLP 164          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_RALEJ (NADH-quinone oxidoreductase subunit D OS=Ralstonia eutropha (strain JMP134) GN=nuoD PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.254e-37
Identity = 75/156 (48.08%), Postives = 104/156 (66.67%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLP 611
            +N GP HP+ HGVLRL++ LDGE +   +P +G LHR  EK+AE ++ IQ +PY+ R DY++ M  E   V   E+L  I VP RA YIRV+  E++R+ +HL+W+G    D+GA   F Y FRERE ++D++EA +G RM   Y+R GGV  DLP
Sbjct:    9 LNFGPQHPAAHGVLRLVLELDGEVIQRADPHIGLLHRATEKLAEQKSWIQNVPYMDRLDYVSMMSNEHAYVMAIERLLGIEVPIRAQYIRVMFDEITRLLNHLMWIGAHALDVGAMAVFLYAFREREDMFDMYEAVSGARMHAAYYRPGGVYRDLP 164          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_POLSJ (NADH-quinone oxidoreductase subunit D OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=nuoD PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.254e-37
Identity = 77/156 (49.36%), Postives = 102/156 (65.38%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLP 611
            +N GP HP+ HGVLRL++ LDGE +   +P +G LHR  EK+AE++T IQ LPY+ R DY++ M  E       E+L  + VP RA YIRV+  E++R+ +HLLWLG    D GA     Y FRERE ++D++EA +G RM   YFR GGV  DLP
Sbjct:    9 LNFGPQHPAAHGVLRLVLELDGEVIQRADPHIGLLHRATEKLAESKTYIQSLPYMDRLDYVSMMSNEQAYCLAIEKLLGVDVPIRAQYIRVMYAEITRLLNHLLWLGAHGFDCGAMNILIYCFREREALFDMYEAVSGARMHAAYFRPGGVYRDLP 164          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_POLNS (NADH-quinone oxidoreductase subunit D OS=Polynucleobacter necessarius (strain STIR1) GN=nuoD PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.254e-37
Identity = 76/156 (48.72%), Postives = 104/156 (66.67%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLP 611
            +N GP HP+ HGVLRL++ LDGE +   +P +G LHR  EK+A+ RT IQ +PY+ R DY++ M  E   V   E+L  + VP RA YIRV+  EL+R+ +HLLW+G    D+GA   F Y FR+RE ++D++EA +G RM   Y+R GGV  DLP
Sbjct:    9 LNFGPQHPAAHGVLRLVLELDGEVIQRADPHIGLLHRATEKLAKTRTWIQNIPYMDRLDYVSMMSNEHAYVMAIEKLLQVDVPLRAQYIRVMYDELTRLLNHLLWIGCHGLDVGAMAVFLYAFRDREDIFDMYEAVSGARMHAAYYRPGGVYRDLP 164          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_BURXL (NADH-quinone oxidoreductase subunit D OS=Burkholderia xenovorans (strain LB400) GN=nuoD PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.254e-37
Identity = 76/156 (48.72%), Postives = 103/156 (66.03%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLP 611
            +N GP HP+ HGVLRL++ LDGE +   +P +G LHR  EK+AE +T IQ +PY+ R DY++ M  E   V   E+L  I VP RA YIRV+  E++R+ +HL+W+G    D+GA   F Y FRERE + D++EA +G RM   Y+R GGV  DLP
Sbjct:    9 LNFGPQHPAAHGVLRLVLELDGEVIQRADPHIGLLHRATEKLAETKTFIQSVPYMDRLDYVSMMVNEHGYVMAIEKLLGIDVPVRAQYIRVMFDEITRVLNHLMWIGAHALDVGAMAVFLYAFREREDLMDVYEAVSGARMHAAYYRPGGVYRDLP 164          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_ACIAC (NADH-quinone oxidoreductase subunit D OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=nuoD PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.254e-37
Identity = 78/156 (50.00%), Postives = 103/156 (66.03%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLP 611
            +N GP HP+ HGVLRL++ LDGE V   +P +G LHR  EK+AE++T IQ LPY+ R DY++ M  E       E+L  I VP RA YIRV+  E++R+ +HL+WLG    D G+ T   Y FRERE ++D++EA +G RM   YFR GGV  DLP
Sbjct:    9 LNFGPQHPAAHGVLRLVLELDGEVVQRADPHIGLLHRATEKLAEHKTFIQSLPYMDRLDYVSMMCNEHAYCLAIEKLLGIDVPLRAQYIRVMFSEITRLLNHLMWLGSHGNDCGSSTILIYTFREREDLFDMYEAVSGARMHAAYFRPGGVYRDLP 164          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_BURP8 (NADH-quinone oxidoreductase subunit D OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=nuoD PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.862e-37
Identity = 76/156 (48.72%), Postives = 104/156 (66.67%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLP 611
            +N GP HP+ HGVLRL++ LDGE +   +P +G LHR  EK+AE++T IQ +PY+ R DY++ M  E   V   E+L  I VP RA YIRV+  E++R+ +HL+W+G    D+GA   F Y FRERE + D++EA +G RM   Y+R GGV  DLP
Sbjct:    9 LNFGPQHPAAHGVLRLVLELDGEVIQRADPHIGLLHRATEKLAESKTFIQSVPYMDRLDYVSMMVNEHGYVLAIEKLLGIDVPIRAKYIRVLFDEVTRVLNHLMWIGAHALDVGAMAVFLYAFREREDLMDVYEAVSGARMHAAYYRPGGVYRDLP 164          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_AZOSE (NADH-quinone oxidoreductase subunit D OS=Azoarcus sp. (strain EbN1) GN=nuoD PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.862e-37
Identity = 79/156 (50.64%), Postives = 102/156 (65.38%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLP 611
            +N GP HPS HGVLRL++ LDGE V+  +P +G LHRG EK+AE RT +Q +PY+ R DY++ M  E       E+L  + VP RA YIRV+  E++RI +HLL +G    DIGA T   Y FRERE + D +EA +G RM   Y+R GGV  DLP
Sbjct:    9 INFGPQHPSAHGVLRLVLELDGEVVVRADPHIGLLHRGTEKLAETRTWVQSVPYMDRLDYVSMMCNEHAYCLAIERLLGLEVPIRAQYIRVMFDEITRILNHLLGIGTHALDIGAMTMVLYTFREREDLMDAYEAVSGARMHAAYYRPGGVYRDLP 164          
The following BLAST results are available for this feature:
BLAST of DN135126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NUOD2_THEYD3.080e-3741.71NADH-quinone oxidoreductase subunit D 2 OS=Thermod... [more]
NUOD_WOLTR4.023e-3742.02NADH-quinone oxidoreductase subunit D OS=Wolbachia... [more]
NUOD_BURPP4.023e-3748.72NADH-quinone oxidoreductase subunit D OS=Burkholde... [more]
NUOD_RALEJ5.254e-3748.08NADH-quinone oxidoreductase subunit D OS=Ralstonia... [more]
NUOD_POLSJ5.254e-3749.36NADH-quinone oxidoreductase subunit D OS=Polaromon... [more]
NUOD_POLNS5.254e-3748.72NADH-quinone oxidoreductase subunit D OS=Polynucle... [more]
NUOD_BURXL5.254e-3748.72NADH-quinone oxidoreductase subunit D OS=Burkholde... [more]
NUOD_ACIAC5.254e-3750.00NADH-quinone oxidoreductase subunit D OS=Acidovora... [more]
NUOD_BURP86.862e-3748.72NADH-quinone oxidoreductase subunit D OS=Burkholde... [more]
NUOD_AZOSE6.862e-3750.64NADH-quinone oxidoreductase subunit D OS=Azoarcus ... [more]

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Properties
Property NameValue
Genbank descriptionwca06f03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06f03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135126 ID=DN135126; Name=DN135126; organism=Citrus sinensis; type=EST; length=703bp
GGGGAAATTTGAAAAANNNNTTCGAATTATTTGATTTTGACTGTTGATGA
ACTTCTTGTTGTTTTCAACAATTCATGTAAGAATGAATCGAGGAAAAACC
TATGAGTATACTAGCTACAGAAAAAGAAAAAGAATTTATGATAGTCAATA
TGGGACCTCACCACCCGTCAATGCATGGGGTTCTTCGTCTCATCGTTACT
CTAGACGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTCATTTACA
CAGAGGGATGGAAAAAATTGCGGAAAACCGAACAATTATACAATATCTGC
CTTATGTAACCCGTTGGGATTATTTAGCTACTATGTTCACAGAAGCAATA
ACTGTAAATGGACCAGAACAGTTGGGAAATATTCGCGTACCTAAAAGGGC
CAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCCCATC
TGTTATGGCTTGGCCCTTTTATGGCAGATATTGGTGCACAGACTCCTTTC
TTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTGTTCGAAGCTGC
CACCGGTATGAGAATGATGCATAATTATTTTCGTATCGGAGGAGTAGCAG
CTGATTTACCCTATGGTTGGATAGATAAATGTTTGGATTTCTGCGATTAT
TTTTTAACAGGGGTTGCTGAATATCAAAAACNNATTACGCGAAACCCCAT
TTT
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