DN135126

Overview
NameDN135126
Unique NameDN135126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_HELPH (NADH-quinone oxidoreductase subunit D OS=Helicobacter pylori (strain HPAG1) GN=nuoD PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.607e-36
Identity = 74/169 (43.79%), Postives = 101/169 (59.76%), Query Frame = 3
Query:  120 EKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWID 626
            E +   MI+N GP HPS HG LRLI+ L+GE +I   P +G+LHRG EK+ EN T  +Y+P   R DY ++           E L N+ +P+RA  IR I+LEL+R+ SH+ ++     D+GA + F Y F+ RE   DL E   G R+ HN  RIGGV  DLP  W++
Sbjct:   18 EHDDNQMILNFGPQHPSSHGQLRLILELEGEKIIKATPEIGYLHRGCEKLGENMTYNEYMPTTDRLDYTSSTSNNYAYAYAVETLLNLEIPRRAQVIRTILLELNRMISHIFFISVHALDVGAMSVFLYAFKTREYGLDLMEDYCGARLTHNAIRIGGVPLDLPPNWLE 186          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_HELPG (NADH-quinone oxidoreductase subunit D OS=Helicobacter pylori (strain G27) GN=nuoD PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.607e-36
Identity = 74/169 (43.79%), Postives = 101/169 (59.76%), Query Frame = 3
Query:  120 EKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWID 626
            E +   MI+N GP HPS HG LRLI+ L+GE +I   P +G+LHRG EK+ EN T  +Y+P   R DY ++           E L N+ +P+RA  IR I+LEL+R+ SH+ ++     D+GA + F Y F+ RE   DL E   G R+ HN  RIGGV  DLP  W++
Sbjct:   18 EHDDNQMILNFGPQHPSSHGQLRLILELEGEKIIKATPEIGYLHRGCEKLGENMTYNEYMPTTDRLDYTSSTSNNYAYAYAVETLLNLEIPRRAQVIRTILLELNRMISHIFFISVHALDVGAMSVFLYAFKTREYGLDLMEDYCGARLTHNAIRIGGVPLDLPPNWLE 186          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_HELP2 (NADH-quinone oxidoreductase subunit D OS=Helicobacter pylori (strain P12) GN=nuoD PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.607e-36
Identity = 74/169 (43.79%), Postives = 101/169 (59.76%), Query Frame = 3
Query:  120 EKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWID 626
            E +   MI+N GP HPS HG LRLI+ L+GE +I   P +G+LHRG EK+ EN T  +Y+P   R DY ++           E L N+ +P+RA  IR I+LEL+R+ SH+ ++     D+GA + F Y F+ RE   DL E   G R+ HN  RIGGV  DLP  W++
Sbjct:   18 EHDDNQMILNFGPQHPSSHGQLRLILELEGEKIIKATPEIGYLHRGCEKLGENMTYNEYMPTTDRLDYTSSTSNNYAYAYAVETLLNLEIPRRAQVIRTILLELNRMISHIFFISVHALDVGAMSVFLYAFKTREYGLDLMEDYCGARLTHNAIRIGGVPLDLPPNWLE 186          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_AZOSB (NADH-quinone oxidoreductase subunit D OS=Azoarcus sp. (strain BH72) GN=nuoD PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.607e-36
Identity = 79/156 (50.64%), Postives = 101/156 (64.74%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLP 611
            +N GP HPS HGVLRL++ LDGE V   +P +G LHRG EK+AE RT +Q +PY+ R DY++ M  E       E+L  + VP RA YIRV+  E++RI +HLL +G    DIGA T   Y FRERE + D +EA +G RM   Y+R GGV  DLP
Sbjct:    9 INFGPQHPSAHGVLRLVLELDGEVVERADPHIGLLHRGTEKLAETRTWVQSVPYMDRLDYVSMMCNEHAYCMAIERLLGVEVPLRAQYIRVMFDEITRILNHLLNIGTHALDIGAMTMVLYTFREREDLMDAYEAVSGARMHAAYYRPGGVYRDLP 164          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_ACISJ (NADH-quinone oxidoreductase subunit D OS=Acidovorax sp. (strain JS42) GN=nuoD PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.607e-36
Identity = 76/156 (48.72%), Postives = 102/156 (65.38%), Query Frame = 3
Query:  144 VNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLP 611
            +N GP HP+ HGVLRL++ LDGE V   +P +G LHR  EK+AE++T IQ LPY+ R DY++ M  E       E++  I VP RA YIR +  E++R+ +HL+WLG    D G+ T   Y FRERE ++D++EA +G RM   YFR GGV  DLP
Sbjct:    9 LNFGPQHPAAHGVLRLVLELDGEVVQRADPHIGLLHRATEKLAEHKTYIQSLPYMDRLDYVSMMCNEQAYCLAIEKMLGIEVPLRAKYIRTMFGEITRLLNHLMWLGSHGNDCGSSTILIYTFREREDLFDMYEAVSGARMHAAYFRPGGVYRDLP 164          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_MARMM (NADH-quinone oxidoreductase subunit D OS=Maricaulis maris (strain MCS10) GN=nuoD PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.405e-36
Identity = 83/196 (42.35%), Postives = 114/196 (58.16%), Query Frame = 3
Query:  114 ATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            ATE  + F I N GP HP+ HGVLRL++ LDGE V   +P +G LHRG EK+ E++T +Q + Y  R DY+A M  E       E+L  I VPKR  Y+RV+  E+ R+ +HLL +     D+GA TP  + F ERE +   +E A+G RM  +YFR GGV  DLP   ++    +CD F   + +    +T N I
Sbjct:    8 ATEAPRNFTI-NFGPQHPAAHGVLRLVLELDGEVVERVDPHIGLLHRGTEKLLEHKTYLQGIGYFDRLDYVAPMNQEHAFCMAAEKLAGITVPKRGEYVRVLYCEIGRVLNHLLNVTTQAMDVGALTPPLWGFEEREKLMVFYERASGSRMHAHYFRPGGVHQDLPMKLVEDIRAWCDQFPAKLDDIDSLLTENRI 202          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_HELAH (NADH-quinone oxidoreductase subunit D OS=Helicobacter acinonychis (strain Sheeba) GN=nuoD PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.405e-36
Identity = 73/169 (43.20%), Postives = 102/169 (60.36%), Query Frame = 3
Query:  120 EKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWID 626
            E +   M++N GP HPS HG LRLI+ L+GE +I   P +G+LHRG EK+ EN T  +Y+P   R DY ++        +  E L N+ +P+RA  IR I+LEL+R+ SH+ ++     D+GA + F Y F+ RE   DL E   G R+ HN  RIGGV  DLP  W++
Sbjct:   18 EHDDNQMVLNFGPQHPSSHGQLRLILELEGERIIKATPEIGYLHRGCEKLGENMTYNEYMPTTDRLDYTSSASNNYAYAHAVETLLNLEIPRRAQVIRTILLELNRMISHIFFISVHALDVGAMSVFLYAFKTREHGLDLMEDYCGARLTHNAIRIGGVPLDLPPNWLE 186          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_XANP2 (NADH-quinone oxidoreductase subunit D OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=nuoD PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.448e-36
Identity = 86/194 (44.33%), Postives = 112/194 (57.73%), Query Frame = 3
Query:  120 EKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            +K + F I N GP HP+ HGVLRL++ LDGE V   +P +G LHRG EK+ E +T +Q +PY  R DY A M  E       E+L  I VPKR   IRV+  E+ R+ SHLL +  F  D+GA TP  + F ERE +   +E A+G RM   YFR GGV  DLP   ++    FCD FL  + +    +T N I
Sbjct:   12 DKVRNFQI-NFGPQHPAAHGVLRLVLELDGEVVERVDPHIGLLHRGTEKLIEAKTYLQAVPYFDRLDYCAPMNQEHAFCLAAEKLLGIEVPKRGQLIRVLYSEIGRLLSHLLNVTTFAMDVGALTPPLWGFEEREKLMIFYERASGSRMHAAYFRPGGVHQDLPRALVEDIGAFCDPFLKLLDDLDGLVTENRI 204          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_WOLPM (NADH-quinone oxidoreductase subunit D OS=Wolbachia pipientis wMel GN=nuoD PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.448e-36
Identity = 77/188 (40.96%), Postives = 113/188 (60.11%), Query Frame = 3
Query:  138 MIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++N GP HP+ HGVLRL++ +DGE +   +P +G LHRG EK+ E++T +Q LPY  R DY++ M  E       E+L    VP RA Y+RV+  EL+RI +HLL +     D+GA TP  ++F ERE + + +E A+G R    Y R GG+AAD+P   I+    F + F   + +  + +T N I
Sbjct:    7 MMLNFGPQHPAAHGVLRLVLEMDGEVIERADPHIGLLHRGTEKLIEHKTYLQALPYFDRLDYVSPMSQEHAYSLCVEKLLQCEVPIRAKYLRVLFCELTRILNHLLNVSSQALDVGAMTPLLWLFEEREKILEFYERASGARFHAAYIRPGGIAADVPEDLIEDIAKFIEQFPKYIDDVDELLTENRI 194          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NUOD_METS4 (NADH-quinone oxidoreductase subunit D OS=Methylobacterium sp. (strain 4-46) GN=nuoD PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.448e-36
Identity = 86/195 (44.10%), Postives = 110/195 (56.41%), Query Frame = 3
Query:  117 TEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            TE       +N GP HP+ HGVLRL++ LDGE V   +P +G LHRG EK+ E +T +Q  PY  R DY+A M  E       E+L  I VP+RA  IR +  E+ R+ SHLL +     D+GA TP  + F ERE +   +E A+G R+  NYFR GGV  DLP G ID    FCD FL  V +    +  N I
Sbjct:    2 TEHSIRNFSINFGPQHPAAHGVLRLVLELDGEIVERVDPHIGLLHRGTEKLIEVKTYLQATPYFDRLDYVAPMNQEHAFCLAVEKLLGIEVPRRAKLIRTLFCEIGRLLSHLLNVTTQAMDVGALTPPLWGFEEREKLMIFYERASGARLHANYFRPGGVHQDLPPGLIDDIEAFCDPFLQVVDDLDALVIGNRI 196          
The following BLAST results are available for this feature:
BLAST of DN135126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NUOD_HELPH2.607e-3643.79NADH-quinone oxidoreductase subunit D OS=Helicobac... [more]
NUOD_HELPG2.607e-3643.79NADH-quinone oxidoreductase subunit D OS=Helicobac... [more]
NUOD_HELP22.607e-3643.79NADH-quinone oxidoreductase subunit D OS=Helicobac... [more]
NUOD_AZOSB2.607e-3650.64NADH-quinone oxidoreductase subunit D OS=Azoarcus ... [more]
NUOD_ACISJ2.607e-3648.72NADH-quinone oxidoreductase subunit D OS=Acidovora... [more]
NUOD_MARMM3.405e-3642.35NADH-quinone oxidoreductase subunit D OS=Maricauli... [more]
NUOD_HELAH3.405e-3643.20NADH-quinone oxidoreductase subunit D OS=Helicobac... [more]
NUOD_XANP24.448e-3644.33NADH-quinone oxidoreductase subunit D OS=Xanthobac... [more]
NUOD_WOLPM4.448e-3640.96NADH-quinone oxidoreductase subunit D OS=Wolbachia... [more]
NUOD_METS44.448e-3644.10NADH-quinone oxidoreductase subunit D OS=Methyloba... [more]

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Properties
Property NameValue
Genbank descriptionwca06f03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06f03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135126 ID=DN135126; Name=DN135126; organism=Citrus sinensis; type=EST; length=703bp
GGGGAAATTTGAAAAANNNNTTCGAATTATTTGATTTTGACTGTTGATGA
ACTTCTTGTTGTTTTCAACAATTCATGTAAGAATGAATCGAGGAAAAACC
TATGAGTATACTAGCTACAGAAAAAGAAAAAGAATTTATGATAGTCAATA
TGGGACCTCACCACCCGTCAATGCATGGGGTTCTTCGTCTCATCGTTACT
CTAGACGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTCATTTACA
CAGAGGGATGGAAAAAATTGCGGAAAACCGAACAATTATACAATATCTGC
CTTATGTAACCCGTTGGGATTATTTAGCTACTATGTTCACAGAAGCAATA
ACTGTAAATGGACCAGAACAGTTGGGAAATATTCGCGTACCTAAAAGGGC
CAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCCCATC
TGTTATGGCTTGGCCCTTTTATGGCAGATATTGGTGCACAGACTCCTTTC
TTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTGTTCGAAGCTGC
CACCGGTATGAGAATGATGCATAATTATTTTCGTATCGGAGGAGTAGCAG
CTGATTTACCCTATGGTTGGATAGATAAATGTTTGGATTTCTGCGATTAT
TTTTTAACAGGGGTTGCTGAATATCAAAAACNNATTACGCGAAACCCCAT
TTT
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