DN135126

Overview
NameDN135126
Unique NameDN135126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2919 contig Csv1_Contig2919:612..1314. BLAST: Citrus Unigene V1 Contigs to TAIR9
Homology
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_CRUWA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Crucihimalaya wallichii GN=ndhH PE=3 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 2.237e-104
Identity = 178/191 (93.19%), Postives = 185/191 (96.86%), Query Frame = 3
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGPHHPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENR IIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE +YDLFEAATGMRMMHN+FRIGG+AADLPYGWIDKCLDFCDYFLT V EYQK ITRNPI
Sbjct:    8 KDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFIYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCDYFLTEVVEYQKLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_ARAHI (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Arabis hirsuta GN=ndhH PE=3 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 2.237e-104
Identity = 179/191 (93.72%), Postives = 185/191 (96.86%), Query Frame = 3
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGPHHPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENR IIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE VYDLFEAATGMRMMHN+FRIGG+AADLPYGWIDKCLDFCDYFLT V EYQK ITRNPI
Sbjct:    8 KDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCDYFLTEVIEYQKLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_LEMMI (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Lemna minor GN=ndhH PE=3 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 3.816e-104
Identity = 178/195 (91.28%), Postives = 187/195 (95.90%), Query Frame = 3
Query:  117 TEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            T  + + MIVNMGP HPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTI+QYLPYVTRWDYLATMFTEAITVN PEQLGNI+VP+RASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTG+ EY+K ITRNPI
Sbjct:    6 TNTKNDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIVQYLPYVTRWDYLATMFTEAITVNAPEQLGNIQVPQRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGIDEYEKLITRNPI 200          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_IPOPU (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Ipomoea purpurea GN=ndhH PE=3 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 4.984e-104
Identity = 179/196 (91.33%), Postives = 189/196 (96.43%), Query Frame = 3
Query:  114 ATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            A    K+ MIVNMGPHHPSMHGVLRLI+TLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPE+L NI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEAATGMRMMHN+FRIGGVAADLP+GWIDKCLDFC+YFLTGVAEYQK IT+NPI
Sbjct:    3 APATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPERLSNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNFFRIGGVAADLPHGWIDKCLDFCNYFLTGVAEYQKLITQNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_BUXMI (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Buxus microphylla GN=ndhH PE=3 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 4.984e-104
Identity = 177/191 (92.67%), Postives = 187/191 (97.91%), Query Frame = 3
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ +IVNMGPHHPSMHGVLRLIV+LDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAIT+N PEQLGNI+VPKRAS+IRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLP+GWIDKCLDFCDYFLTGV EYQK ITRNP+
Sbjct:    8 KDLIIVNMGPHHPSMHGVLRLIVSLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITINAPEQLGNIQVPKRASHIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPHGWIDKCLDFCDYFLTGVVEYQKLITRNPV 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_TRISU (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Trifolium subterraneum GN=ndhH PE=3 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 6.509e-104
Identity = 179/191 (93.72%), Postives = 185/191 (96.86%), Query Frame = 3
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGP HPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKC DFC+YFLT V EYQK ITRNPI
Sbjct:    8 KDLMIVNMGPQHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCFDFCNYFLTRVIEYQKLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_AETGR (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Aethionema grandiflora GN=ndhH PE=3 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 6.509e-104
Identity = 177/193 (91.71%), Postives = 186/193 (96.37%), Query Frame = 3
Query:  123 KEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            + K+ MIVN+GPHHPSMHGVLRLIVTLDGEDV+DC+PILG+LHRGMEKIAENR IIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE VYDLFEAATGMRMMHN+FRIGG+AADLPYGWIDKCLDFCDYFLT V EYQK ITRNPI
Sbjct:    6 RRKDLMIVNIGPHHPSMHGVLRLIVTLDGEDVVDCQPILGYLHRGMEKIAENRAIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCDYFLTEVVEYQKLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_JASNU (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Jasminum nudiflorum GN=ndhH PE=3 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 8.501e-104
Identity = 175/198 (88.38%), Postives = 188/198 (94.95%), Query Frame = 3
Query:  108 ILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            ++A    K+ MI+NMGPHHPSMHGVLRLI+TLDGEDVIDCEPILG+LHRGMEKIAENRTI+QYLPYVTRWDYLATMFTEAI+VNGPEQLGNI+VPKRASYIR IMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERE +YDLFEAATGMRMMHN+FRIGG+AADLP+GWIDKCLDFCDYFL GV EYQK ITRNPI
Sbjct:    1 MIAPTTRKDLMIINMGPHHPSMHGVLRLIITLDGEDVIDCEPILGYLHRGMEKIAENRTILQYLPYVTRWDYLATMFTEAISVNGPEQLGNIQVPKRASYIRTIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFIYDLFEAATGMRMMHNFFRIGGIAADLPHGWIDKCLDFCDYFLRGVVEYQKLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_MORIN (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Morus indica GN=ndhH PE=3 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 1.110e-103
Identity = 178/191 (93.19%), Postives = 185/191 (96.86%), Query Frame = 3
Query:  129 KEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            K+ MIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAIT+NGPE LGNI+VPKRASYIR IMLELSRIASHLLWLGPF+ADIGAQTPFFYIFRERELVYDLFEAATGMRMMHN+FRIGGVAADLP+GWIDKCLDFCDYFL GV EYQK ITRNPI
Sbjct:    8 KDLMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITINGPELLGNIQVPKRASYIRAIMLELSRIASHLLWLGPFLADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNFFRIGGVAADLPHGWIDKCLDFCDYFLIGVTEYQKLITRNPI 198          
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_PELHO (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Pelargonium hortorum GN=ndhH PE=3 SV=1)

HSP 1 Score: 375.17 bits (962), Expect = 1.894e-103
Identity = 179/200 (89.50%), Postives = 190/200 (95.00%), Query Frame = 3
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M+I AT K+   MIVNMGPHHPSMHGVLRLI+TLDGEDVIDCEP+LG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTE ITVN PEQLGNI+VPKRA YIR IMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLP+GWIDKCLDFC+YFLTG+AEY+K ITRNPI
Sbjct:    1 MTIPATRKD--LMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPVLGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEVITVNAPEQLGNIQVPKRAGYIRTIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPHGWIDKCLDFCNYFLTGLAEYEKLITRNPI 198          
The following BLAST results are available for this feature:
BLAST of DN135126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHH_CRUWA2.237e-10493.19NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_ARAHI2.237e-10493.72NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_LEMMI3.816e-10491.28NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_IPOPU4.984e-10491.33NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_BUXMI4.984e-10492.67NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_TRISU6.509e-10493.72NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_AETGR6.509e-10491.71NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_JASNU8.501e-10488.38NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_MORIN1.110e-10393.19NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_PELHO1.894e-10389.50NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionwca06f03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06f03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135126 ID=DN135126; Name=DN135126; organism=Citrus sinensis; type=EST; length=703bp
GGGGAAATTTGAAAAANNNNTTCGAATTATTTGATTTTGACTGTTGATGA
ACTTCTTGTTGTTTTCAACAATTCATGTAAGAATGAATCGAGGAAAAACC
TATGAGTATACTAGCTACAGAAAAAGAAAAAGAATTTATGATAGTCAATA
TGGGACCTCACCACCCGTCAATGCATGGGGTTCTTCGTCTCATCGTTACT
CTAGACGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTCATTTACA
CAGAGGGATGGAAAAAATTGCGGAAAACCGAACAATTATACAATATCTGC
CTTATGTAACCCGTTGGGATTATTTAGCTACTATGTTCACAGAAGCAATA
ACTGTAAATGGACCAGAACAGTTGGGAAATATTCGCGTACCTAAAAGGGC
CAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCCCATC
TGTTATGGCTTGGCCCTTTTATGGCAGATATTGGTGCACAGACTCCTTTC
TTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTGTTCGAAGCTGC
CACCGGTATGAGAATGATGCATAATTATTTTCGTATCGGAGGAGTAGCAG
CTGATTTACCCTATGGTTGGATAGATAAATGTTTGGATTTCTGCGATTAT
TTTTTAACAGGGGTTGCTGAATATCAAAAACNNATTACGCGAAACCCCAT
TTT
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